RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 GADD45GO95257 159 aa3.14□□□□□ -1.91
NUP88-213ENST00000576862 IGLV3-19P01714 112 aa3.14□□□□□ -1.91
NUP88-213ENST00000576862 C1QCP02747 245 aa3.14□□□□□ -1.91
NUP88-213ENST00000576862 IL9P15248 144 aa3.14□□□□□ -1.91
NUP88-213ENST00000576862 CD34P28906 385 aa3.14□□□□□ -1.91
NUP88-213ENST00000576862 MTPNP58546 118 aa3.14□□□□□ -1.91
NUP88-213ENST00000576862 ECH1Q13011 328 aa3.14□□□□□ -1.91
NUP88-213ENST00000576862 OR7A5Q15622 319 aa3.14□□□□□ -1.91
NUP88-213ENST00000576862 ACOT6Q3I5F7 207 aaPredicted RBP3.14□□□□□ -1.91
NUP88-213ENST00000576862 NSUN5P1Q3KNT7 163 aa3.14□□□□□ -1.91
NUP88-213ENST00000576862 C1orf195Q5TG92 126 aa3.14□□□□□ -1.91
NUP88-213ENST00000576862 C11orf71Q6IPW1 123 aa3.14□□□□□ -1.91
NUP88-213ENST00000576862 NANOGP8Q6NSW7 305 aa3.14□□□□□ -1.91
NUP88-213ENST00000576862 SFXN4Q6P4A7 337 aa3.14□□□□□ -1.91
NUP88-213ENST00000576862 SPNS3Q6ZMD2 512 aa3.14□□□□□ -1.91
NUP88-213ENST00000576862 RASSF6Q6ZTQ3 369 aa3.14□□□□□ -1.91
NUP88-213ENST00000576862 C6orf120Q7Z4R8 191 aa3.14□□□□□ -1.91
NUP88-213ENST00000576862 C1orf158Q8N1D5 194 aa3.14□□□□□ -1.91
NUP88-213ENST00000576862 C6orf223Q8N319 242 aa3.14□□□□□ -1.91
NUP88-213ENST00000576862 C10orf111Q8N326 155 aa3.14□□□□□ -1.91
NUP88-213ENST00000576862 OR1L8Q8NGR8 309 aa3.14□□□□□ -1.91
NUP88-213ENST00000576862 ZNRF2Q8NHG8 242 aa3.14□□□□□ -1.91
NUP88-213ENST00000576862 CCL4L1Q8NHW4 92 aa3.14□□□□□ -1.91
NUP88-213ENST00000576862 EEF1AKMT3Q96AZ1 226 aa3.14□□□□□ -1.91
NUP88-213ENST00000576862 AURKBQ96GD4 344 aaPredicted RBP3.14□□□□□ -1.91
NUP88-213ENST00000576862 BMFQ96LC9 184 aa3.14□□□□□ -1.91
NUP88-213ENST00000576862 NRIP2Q9BQI9 281 aa3.14□□□□□ -1.91
NUP88-213ENST00000576862 C20orf144Q9BQM9 153 aa3.14□□□□□ -1.91
NUP88-213ENST00000576862 GINS3Q9BRX5 216 aa3.14□□□□□ -1.91
NUP88-213ENST00000576862 MED18Q9BUE0 208 aa3.14□□□□□ -1.91
NUP88-213ENST00000576862 EFCAB11Q9BUY7 163 aa3.14□□□□□ -1.91
NUP88-213ENST00000576862 TAPBPLQ9BX59 468 aa3.14□□□□□ -1.91
NUP88-213ENST00000576862 DPY30Q9C005 99 aa3.14□□□□□ -1.91
NUP88-213ENST00000576862 OR51I1Q9H343 314 aa3.14□□□□□ -1.91
NUP88-213ENST00000576862 TCEAL2Q9H3H9 227 aaPredicted RBP3.14□□□□□ -1.91
NUP88-213ENST00000576862 MED29Q9NX70 200 aa3.14□□□□□ -1.91
NUP88-213ENST00000576862 TAS2R5Q9NYW4 299 aa3.14□□□□□ -1.91
NUP88-213ENST00000576862 ZNF223Q9UK11 482 aaPredicted RBP3.14□□□□□ -1.91
NUP88-213ENST00000576862 C14orf166Q9Y224 244 aaKnown RBP3.14□□□□□ -1.91
NUP88-213ENST00000576862 POLR1DQ9Y2S0 133 aa3.14□□□□□ -1.91
NUP88-213ENST00000576862 CDH23Q9H251 3354 aa3.14□□□□□ -1.91
NUP88-213ENST00000576862 IGHV1OR15-9A0A0B4J2B8 117 aa3.13□□□□□ -1.91
NUP88-213ENST00000576862 A0A0U1RQV1 116 aa3.13□□□□□ -1.91
NUP88-213ENST00000576862 NKX2-6A6NCS4 301 aa3.13□□□□□ -1.91
NUP88-213ENST00000576862 OR4C46A6NHA9 309 aa3.13□□□□□ -1.91
NUP88-213ENST00000576862 C4orf51C9J302 202 aa3.13□□□□□ -1.91
NUP88-213ENST00000576862 C5orf58C9J3I9 102 aa3.13□□□□□ -1.91
NUP88-213ENST00000576862 TRAPPC2LH3BP13 241 aa3.13□□□□□ -1.91
NUP88-213ENST00000576862 MOSP00540 346 aa3.13□□□□□ -1.91
NUP88-213ENST00000576862 STATHP02808 62 aa3.13□□□□□ -1.91
NUP88-213ENST00000576862 KLK3P07288 261 aaPredicted RBP3.13□□□□□ -1.91
NUP88-213ENST00000576862 IL3P08700 152 aa3.13□□□□□ -1.91
NUP88-213ENST00000576862 HTR1AP08908 422 aa3.13□□□□□ -1.91
NUP88-213ENST00000576862 OR5G3P0C626 314 aa3.13□□□□□ -1.91
NUP88-213ENST00000576862 ZNF250P15622 560 aa3.13□□□□□ -1.91
NUP88-213ENST00000576862 USF1P22415 310 aaPredicted RBP3.13□□□□□ -1.91
NUP88-213ENST00000576862 PSMB9P28065 219 aa3.13□□□□□ -1.91
NUP88-213ENST00000576862 PEBP1P30086 187 aaKnown RBP3.13□□□□□ -1.91
NUP88-213ENST00000576862 S100A3P33764 101 aa3.13□□□□□ -1.91
NUP88-213ENST00000576862 GALR1P47211 349 aa3.13□□□□□ -1.91
NUP88-213ENST00000576862 GZMMP51124 257 aa3.13□□□□□ -1.91
NUP88-213ENST00000576862 SUB1P53999 127 aaKnown RBP eCLIP3.13□□□□□ -1.91
NUP88-213ENST00000576862 RHOBP62745 196 aa3.13□□□□□ -1.91
NUP88-213ENST00000576862 PSG4Q00888 419 aa3.13□□□□□ -1.91
NUP88-213ENST00000576862 FZD2Q14332 565 aa3.13□□□□□ -1.91
NUP88-213ENST00000576862 CDK10Q15131 360 aa3.13□□□□□ -1.91
NUP88-213ENST00000576862 SURF2Q15527 256 aaPredicted RBP3.13□□□□□ -1.91
NUP88-213ENST00000576862 NRF1Q16656 503 aa3.13□□□□□ -1.91
NUP88-213ENST00000576862 PLPPR5Q32ZL2 321 aa3.13□□□□□ -1.91
NUP88-213ENST00000576862 RNASE10Q5GAN6 216 aaKnown RBP3.13□□□□□ -1.91
NUP88-213ENST00000576862 C1orf100Q5SVJ3 147 aa3.13□□□□□ -1.91
NUP88-213ENST00000576862 DNLZQ5SXM8 178 aa3.13□□□□□ -1.91
NUP88-213ENST00000576862 LCN8Q6JVE9 175 aa3.13□□□□□ -1.91
NUP88-213ENST00000576862 TBPL2Q6SJ96 375 aa3.13□□□□□ -1.91
NUP88-213ENST00000576862 IZUMO2Q6UXV1 221 aa3.13□□□□□ -1.91
NUP88-213ENST00000576862 Q6ZSR6 202 aa3.13□□□□□ -1.91
NUP88-213ENST00000576862 SLC16A13Q7RTY0 426 aa3.13□□□□□ -1.91
NUP88-213ENST00000576862 COMMD6Q7Z4G1 85 aa3.13□□□□□ -1.91
NUP88-213ENST00000576862 ARPINQ7Z6K5 226 aa3.13□□□□□ -1.91
NUP88-213ENST00000576862 COMMD7Q86VX2 200 aa3.13□□□□□ -1.91
NUP88-213ENST00000576862 CLECL1Q8IZS7 167 aa3.13□□□□□ -1.91
NUP88-213ENST00000576862 GAPTQ8N292 157 aa3.13□□□□□ -1.91
NUP88-213ENST00000576862 TMEM86BQ8N661 226 aa3.13□□□□□ -1.91
NUP88-213ENST00000576862 UBAC2Q8NBM4 344 aa3.13□□□□□ -1.91
NUP88-213ENST00000576862 TSTD1Q8NFU3 115 aa3.13□□□□□ -1.91
NUP88-213ENST00000576862 OR51S1Q8NGJ8 323 aa3.13□□□□□ -1.91
NUP88-213ENST00000576862 OR9Q1Q8NGQ5 310 aa3.13□□□□□ -1.91
NUP88-213ENST00000576862 OR4S2Q8NH73 311 aa3.13□□□□□ -1.91
NUP88-213ENST00000576862 NT5CQ8TCD5 201 aa3.13□□□□□ -1.91
NUP88-213ENST00000576862 DNAJC9Q8WXX5 260 aa3.13□□□□□ -1.91
NUP88-213ENST00000576862 BORCS7Q96B45 105 aa3.13□□□□□ -1.91
NUP88-213ENST00000576862 PPCDCQ96CD2 204 aa3.13□□□□□ -1.91
NUP88-213ENST00000576862 STARD4Q96DR4 205 aa3.13□□□□□ -1.91
NUP88-213ENST00000576862 SEH1LQ96EE3 360 aa3.13□□□□□ -1.91
NUP88-213ENST00000576862 CCDC115Q96NT0 180 aa3.13□□□□□ -1.91
NUP88-213ENST00000576862 OR2M2Q96R28 347 aa3.13□□□□□ -1.91
NUP88-213ENST00000576862 OR52E6Q96RD3 313 aa3.13□□□□□ -1.91
NUP88-213ENST00000576862 P2RX4Q99571 388 aa3.13□□□□□ -1.91
NUP88-213ENST00000576862 MND1Q9BWT6 205 aa3.13□□□□□ -1.91
NUP88-213ENST00000576862 AICDAQ9GZX7 198 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms