RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 VAX1Q5SQQ9 334 aa9.81□□□□□ -0.84
NPLOC4-213ENST00000573519 TMEM69Q5SWH9 247 aa9.81□□□□□ -0.84
NPLOC4-213ENST00000573519 ZNF429Q86V71 674 aa9.81□□□□□ -0.84
NPLOC4-213ENST00000573519 ANKRD13BQ86YJ7 626 aa9.81□□□□□ -0.84
NPLOC4-213ENST00000573519 RHOVQ96L33 236 aa9.81□□□□□ -0.84
NPLOC4-213ENST00000573519 MRPS26Q9BYN8 205 aaKnown RBP9.81□□□□□ -0.84
NPLOC4-213ENST00000573519 COA4Q9NYJ1 87 aa9.81□□□□□ -0.84
NPLOC4-213ENST00000573519 PRELID3BQ9Y3B1 194 aa9.81□□□□□ -0.84
NPLOC4-213ENST00000573519 MSGN1A6NI15 193 aa9.8□□□□□ -0.84
NPLOC4-213ENST00000573519 H3BUA1 57 aa9.8□□□□□ -0.84
NPLOC4-213ENST00000573519 SLC22A5O76082 557 aa9.8□□□□□ -0.84
NPLOC4-213ENST00000573519 AADACP22760 399 aa9.8□□□□□ -0.84
NPLOC4-213ENST00000573519 FCGR2CP31995 323 aa9.8□□□□□ -0.84
NPLOC4-213ENST00000573519 UBE2KP61086 200 aa9.8□□□□□ -0.84
NPLOC4-213ENST00000573519 DEFA5Q01523 94 aa9.8□□□□□ -0.84
NPLOC4-213ENST00000573519 TEX45Q8NA69 505 aa9.8□□□□□ -0.84
NPLOC4-213ENST00000573519 OSR1Q8TAX0 266 aaPredicted RBP9.8□□□□□ -0.84
NPLOC4-213ENST00000573519 TCTEX1D2Q8WW35 142 aa9.8□□□□□ -0.84
NPLOC4-213ENST00000573519 SNAPC3Q92966 411 aa9.8□□□□□ -0.84
NPLOC4-213ENST00000573519 KCTD12Q96CX2 325 aaKnown RBP9.8□□□□□ -0.84
NPLOC4-213ENST00000573519 MRPS7Q9Y2R9 242 aaKnown RBP9.8□□□□□ -0.84
NPLOC4-213ENST00000573519 RBMX2Q9Y388 322 aaKnown RBP9.8□□□□□ -0.84
NPLOC4-213ENST00000573519 A0A0G2JLM5 398 aa9.79□□□□□ -0.84
NPLOC4-213ENST00000573519 ANKRD34BA5PLL1 514 aa9.79□□□□□ -0.84
NPLOC4-213ENST00000573519 HPGDSO60760 199 aa9.79□□□□□ -0.84
NPLOC4-213ENST00000573519 ACTL6BO94805 426 aa9.79□□□□□ -0.84
NPLOC4-213ENST00000573519 GABARAPO95166 117 aa9.79□□□□□ -0.84
NPLOC4-213ENST00000573519 IGLV2-14P01704 120 aa9.79□□□□□ -0.84
NPLOC4-213ENST00000573519 SAA1P0DJI8 122 aaPredicted RBP9.79□□□□□ -0.84
NPLOC4-213ENST00000573519 ALDH3B2P48448 385 aa9.79□□□□□ -0.84
NPLOC4-213ENST00000573519 RORCP51449 518 aa9.79□□□□□ -0.84
NPLOC4-213ENST00000573519 RPL30P62888 115 aaKnown RBP9.79□□□□□ -0.84
NPLOC4-213ENST00000573519 PRSS8Q16651 343 aa9.79□□□□□ -0.84
NPLOC4-213ENST00000573519 GPR141Q7Z602 305 aa9.79□□□□□ -0.84
NPLOC4-213ENST00000573519 TMEM68Q96MH6 324 aa9.79□□□□□ -0.84
NPLOC4-213ENST00000573519 GPHA2Q96T91 129 aa9.79□□□□□ -0.84
NPLOC4-213ENST00000573519 IFT46Q9NQC8 304 aa9.79□□□□□ -0.84
NPLOC4-213ENST00000573519 TAS2R8Q9NYW2 309 aa9.79□□□□□ -0.84
NPLOC4-213ENST00000573519 TNFSF12O43508 249 aa9.78□□□□□ -0.84
NPLOC4-213ENST00000573519 CREBL2O60519 120 aaPredicted RBP9.78□□□□□ -0.84
NPLOC4-213ENST00000573519 ELK1P19419 428 aa9.78□□□□□ -0.84
NPLOC4-213ENST00000573519 CBX5P45973 191 aa9.78□□□□□ -0.84
NPLOC4-213ENST00000573519 CDK10Q15131 360 aa9.78□□□□□ -0.84
NPLOC4-213ENST00000573519 MRGPRG-AS1Q2M3A8 158 aa9.78□□□□□ -0.84
NPLOC4-213ENST00000573519 ACSM6Q6P461 480 aa9.78□□□□□ -0.84
NPLOC4-213ENST00000573519 OR4S2Q8NH73 311 aa9.78□□□□□ -0.84
NPLOC4-213ENST00000573519 SECTM1Q8WVN6 248 aa9.78□□□□□ -0.84
NPLOC4-213ENST00000573519 SRSF12Q8WXF0 261 aaKnown RBP9.78□□□□□ -0.84
NPLOC4-213ENST00000573519 OR4C12Q96R67 309 aa9.78□□□□□ -0.84
NPLOC4-213ENST00000573519 HSD17B10Q99714 261 aaKnown RBP9.78□□□□□ -0.84
NPLOC4-213ENST00000573519 RSRP1Q9BUV0 290 aa9.78□□□□□ -0.84
NPLOC4-213ENST00000573519 TINAGL1Q9GZM7 467 aaPredicted RBP9.78□□□□□ -0.84
NPLOC4-213ENST00000573519 ZNF430Q9H8G1 570 aaPredicted RBP9.78□□□□□ -0.84
NPLOC4-213ENST00000573519 RANGRFQ9HD47 186 aaPredicted RBP9.78□□□□□ -0.84
NPLOC4-213ENST00000573519 CCL28Q9NRJ3 127 aa9.78□□□□□ -0.84
NPLOC4-213ENST00000573519 LSM4Q9Y4Z0 139 aaKnown RBP9.78□□□□□ -0.84
NPLOC4-213ENST00000573519 PPYP01298 95 aa9.77□□□□□ -0.85
NPLOC4-213ENST00000573519 PMP2P02689 132 aa9.77□□□□□ -0.85
NPLOC4-213ENST00000573519 OR9G9P0C7N8 305 aa9.77□□□□□ -0.85
NPLOC4-213ENST00000573519 SPNP16150 400 aa9.77□□□□□ -0.85
NPLOC4-213ENST00000573519 PRSS3P35030 304 aa9.77□□□□□ -0.85
NPLOC4-213ENST00000573519 RFX2P48378 723 aa9.77□□□□□ -0.85
NPLOC4-213ENST00000573519 FXYD4P59646 89 aa9.77□□□□□ -0.85
NPLOC4-213ENST00000573519 OVCH2Q7RTZ1 564 aa9.77□□□□□ -0.85
NPLOC4-213ENST00000573519 HAPLN4Q86UW8 402 aa9.77□□□□□ -0.85
NPLOC4-213ENST00000573519 SNX29P2Q8IUI4 249 aa9.77□□□□□ -0.85
NPLOC4-213ENST00000573519 MMD2Q8IY49 270 aa9.77□□□□□ -0.85
NPLOC4-213ENST00000573519 VKORC1L1Q8N0U8 176 aa9.77□□□□□ -0.85
NPLOC4-213ENST00000573519 MFSD4AQ8N468 514 aa9.77□□□□□ -0.85
NPLOC4-213ENST00000573519 OR5AP2Q8NGF4 316 aa9.77□□□□□ -0.85
NPLOC4-213ENST00000573519 OR6Q1Q8NGQ2 317 aa9.77□□□□□ -0.85
NPLOC4-213ENST00000573519 ASCL2Q99929 193 aa9.77□□□□□ -0.85
NPLOC4-213ENST00000573519 ELOVL1Q9BW60 279 aa9.77□□□□□ -0.85
NPLOC4-213ENST00000573519 SMIM31A0A1B0GVY4 71 aa9.76□□□□□ -0.85
NPLOC4-213ENST00000573519 FAM25AB3EWG3 89 aa9.76□□□□□ -0.85
NPLOC4-213ENST00000573519 FAM25CB3EWG5 89 aa9.76□□□□□ -0.85
NPLOC4-213ENST00000573519 FAM25GB3EWG6 89 aa9.76□□□□□ -0.85
NPLOC4-213ENST00000573519 APOA1P02647 267 aa9.76□□□□□ -0.85
NPLOC4-213ENST00000573519 PRH1P02810 166 aa9.76□□□□□ -0.85
NPLOC4-213ENST00000573519 ZP3P21754 424 aa9.76□□□□□ -0.85
NPLOC4-213ENST00000573519 EIF4EBP1Q13541 118 aaPredicted RBP9.76□□□□□ -0.85
NPLOC4-213ENST00000573519 SPCS2Q15005 226 aa9.76□□□□□ -0.85
NPLOC4-213ENST00000573519 C10orf55Q5SWW7 151 aa9.76□□□□□ -0.85
NPLOC4-213ENST00000573519 CLVS1Q8IUQ0 354 aaPredicted RBP9.76□□□□□ -0.85
NPLOC4-213ENST00000573519 ADAD2Q8NCV1 583 aaKnown RBP9.76□□□□□ -0.85
NPLOC4-213ENST00000573519 SLC5A7Q9GZV3 580 aa9.76□□□□□ -0.85
NPLOC4-213ENST00000573519 EHFQ9NZC4 300 aa9.76□□□□□ -0.85
NPLOC4-213ENST00000573519 PEF1Q9UBV8 284 aaKnown RBP9.76□□□□□ -0.85
NPLOC4-213ENST00000573519 ANAPC10Q9UM13 185 aa9.76□□□□□ -0.85
NPLOC4-213ENST00000573519 SMAD5-AS1Q9Y6J3 95 aa9.76□□□□□ -0.85
NPLOC4-213ENST00000573519 KBTBD11O94819 623 aa9.75□□□□□ -0.85
NPLOC4-213ENST00000573519 OR2A4O95047 310 aa9.75□□□□□ -0.85
NPLOC4-213ENST00000573519 GP9P14770 177 aa9.75□□□□□ -0.85
NPLOC4-213ENST00000573519 ZNF182P17025 639 aaPredicted RBP9.75□□□□□ -0.85
NPLOC4-213ENST00000573519 HLA-DMAP28067 261 aa9.75□□□□□ -0.85
NPLOC4-213ENST00000573519 BRWD1-AS2P59051 145 aa9.75□□□□□ -0.85
NPLOC4-213ENST00000573519 DYRK1AQ13627 763 aa9.75□□□□□ -0.85
NPLOC4-213ENST00000573519 RNASE12Q5GAN4 147 aaKnown RBP9.75□□□□□ -0.85
NPLOC4-213ENST00000573519 MZT2AQ6P582 158 aa9.75□□□□□ -0.85
NPLOC4-213ENST00000573519 ZNF66Q6ZN08 573 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms