RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 GUCA2BQ16661 112 aa11.71□□□□□ -0.53
NME3-211ENST00000568561 OR2B11Q5JQS5 317 aa11.71□□□□□ -0.53
NME3-211ENST00000568561 TEX45Q8NA69 505 aa11.71□□□□□ -0.53
NME3-211ENST00000568561 SRD5A3Q9H8P0 318 aa11.71□□□□□ -0.53
NME3-211ENST00000568561 SLC2A8Q9NY64 477 aa11.71□□□□□ -0.53
NME3-211ENST00000568561 SCN3BQ9NY72 215 aa11.71□□□□□ -0.53
NME3-211ENST00000568561 V9GY05 133 aa11.71□□□□□ -0.53
NME3-211ENST00000568561 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.7□□□□□ -0.54
NME3-211ENST00000568561 FAM223BA6NKX1 122 aa11.7□□□□□ -0.54
NME3-211ENST00000568561 TUSC2O75896 110 aa11.7□□□□□ -0.54
NME3-211ENST00000568561 RRASP10301 218 aa11.7□□□□□ -0.54
NME3-211ENST00000568561 MAP2K4P45985 399 aa11.7□□□□□ -0.54
NME3-211ENST00000568561 FAM223AQ8IWN6 122 aa11.7□□□□□ -0.54
NME3-211ENST00000568561 H1FOOQ8IZA3 346 aaPredicted RBP11.7□□□□□ -0.54
NME3-211ENST00000568561 OR2K2Q8NGT1 345 aa11.7□□□□□ -0.54
NME3-211ENST00000568561 OR10R2Q8NGX6 335 aa11.7□□□□□ -0.54
NME3-211ENST00000568561 CACNG8Q8WXS5 425 aa11.7□□□□□ -0.54
NME3-211ENST00000568561 WDR89Q96FK6 387 aaPredicted RBP11.7□□□□□ -0.54
NME3-211ENST00000568561 ELF5Q9UKW6 265 aaPredicted RBP11.7□□□□□ -0.54
NME3-211ENST00000568561 RAB22AQ9UL26 194 aa11.7□□□□□ -0.54
NME3-211ENST00000568561 RAB26Q9ULW5 256 aa11.7□□□□□ -0.54
NME3-211ENST00000568561 TRBV9A0A0B4J1U6 114 aa11.69□□□□□ -0.54
NME3-211ENST00000568561 HMX3A6NHT5 357 aa11.69□□□□□ -0.54
NME3-211ENST00000568561 C2orf70A6NJV1 201 aa11.69□□□□□ -0.54
NME3-211ENST00000568561 OR11H12B2RN74 326 aa11.69□□□□□ -0.54
NME3-211ENST00000568561 AIREO43918 545 aa11.69□□□□□ -0.54
NME3-211ENST00000568561 FCGR3BO75015 233 aa11.69□□□□□ -0.54
NME3-211ENST00000568561 IGHV3-23P01764 117 aa11.69□□□□□ -0.54
NME3-211ENST00000568561 FOLR2P14207 255 aa11.69□□□□□ -0.54
NME3-211ENST00000568561 HIST1H1DP16402 221 aaKnown RBP11.69□□□□□ -0.54
NME3-211ENST00000568561 MLLT11Q13015 90 aaPredicted RBP11.69□□□□□ -0.54
NME3-211ENST00000568561 TRAM1Q15629 374 aa11.69□□□□□ -0.54
NME3-211ENST00000568561 DEFB114Q30KQ6 69 aa11.69□□□□□ -0.54
NME3-211ENST00000568561 C15orf32Q32M92 178 aa11.69□□□□□ -0.54
NME3-211ENST00000568561 LAX1Q8IWV1 398 aa11.69□□□□□ -0.54
NME3-211ENST00000568561 VKORC1L1Q8N0U8 176 aa11.69□□□□□ -0.54
NME3-211ENST00000568561 OSR1Q8TAX0 266 aaPredicted RBP11.69□□□□□ -0.54
NME3-211ENST00000568561 ADTRPQ96IZ2 230 aa11.69□□□□□ -0.54
NME3-211ENST00000568561 DCUN1D5Q9BTE7 237 aa11.69□□□□□ -0.54
NME3-211ENST00000568561 CCDC90BQ9GZT6 254 aa11.69□□□□□ -0.54
NME3-211ENST00000568561 S4R3C0 116 aa11.69□□□□□ -0.54
NME3-211ENST00000568561 RAB27BO00194 218 aa11.68□□□□□ -0.54
NME3-211ENST00000568561 RGS10O43665 173 aa11.68□□□□□ -0.54
NME3-211ENST00000568561 ACTL6BO94805 426 aa11.68□□□□□ -0.54
NME3-211ENST00000568561 GADD45AP24522 165 aa11.68□□□□□ -0.54
NME3-211ENST00000568561 PSMA1P25786 263 aaKnown RBP11.68□□□□□ -0.54
NME3-211ENST00000568561 ARFRP1Q13795 201 aa11.68□□□□□ -0.54
NME3-211ENST00000568561 CDK10Q15131 360 aa11.68□□□□□ -0.54
NME3-211ENST00000568561 NECAP1Q8NC96 275 aa11.68□□□□□ -0.54
NME3-211ENST00000568561 SPIN2AQ99865 258 aa11.68□□□□□ -0.54
NME3-211ENST00000568561 SPIN2BQ9BPZ2 258 aa11.68□□□□□ -0.54
NME3-211ENST00000568561 DMRT1Q9Y5R6 373 aa11.68□□□□□ -0.54
NME3-211ENST00000568561 OR2C1O95371 312 aa11.67□□□□□ -0.54
NME3-211ENST00000568561 DIRAS3O95661 229 aa11.67□□□□□ -0.54
NME3-211ENST00000568561 TALDO1P37837 337 aa11.67□□□□□ -0.54
NME3-211ENST00000568561 RPL30P62888 115 aaKnown RBP11.67□□□□□ -0.54
NME3-211ENST00000568561 KCTD9Q7L273 389 aa11.67□□□□□ -0.54
NME3-211ENST00000568561 MMD2Q8IY49 270 aa11.67□□□□□ -0.54
NME3-211ENST00000568561 TTC9CQ8N5M4 171 aa11.67□□□□□ -0.54
NME3-211ENST00000568561 IL17DQ8TAD2 202 aa11.67□□□□□ -0.54
NME3-211ENST00000568561 MGLLQ99685 303 aa11.67□□□□□ -0.54
NME3-211ENST00000568561 DUSP21Q9H596 190 aa11.67□□□□□ -0.54
NME3-211ENST00000568561 ZC4H2Q9NQZ6 224 aa11.67□□□□□ -0.54
NME3-211ENST00000568561 TPRKBQ9Y3C4 175 aa11.67□□□□□ -0.54
NME3-211ENST00000568561 SMIM30A4D0T7 59 aa11.66□□□□□ -0.54
NME3-211ENST00000568561 TEX22C9J3V5 150 aa11.66□□□□□ -0.54
NME3-211ENST00000568561 NFYAP23511 347 aaPredicted RBP11.66□□□□□ -0.54
NME3-211ENST00000568561 KIR2DS2P43631 304 aa11.66□□□□□ -0.54
NME3-211ENST00000568561 TMEM61Q8N0U2 210 aa11.66□□□□□ -0.54
NME3-211ENST00000568561 KCTD12Q96CX2 325 aaKnown RBP11.66□□□□□ -0.54
NME3-211ENST00000568561 CCDC140Q96MF4 163 aa11.66□□□□□ -0.54
NME3-211ENST00000568561 FYTTD1Q96QD9 318 aaKnown RBP11.66□□□□□ -0.54
NME3-211ENST00000568561 ACOT13Q9NPJ3 140 aa11.66□□□□□ -0.54
NME3-211ENST00000568561 FBXL7Q9UJT9 491 aa11.66□□□□□ -0.54
NME3-211ENST00000568561 FRAS1Q86XX4 4008 aa11.65□□□□□ -0.54
NME3-211ENST00000568561 IGKV1D-13A0A0B4J2D9 117 aa11.65□□□□□ -0.54
NME3-211ENST00000568561 A0A1B0GW64 132 aa11.65□□□□□ -0.54
NME3-211ENST00000568561 IFITM5A6NNB3 132 aa11.65□□□□□ -0.54
NME3-211ENST00000568561 E7EUB6 86 aa11.65□□□□□ -0.54
NME3-211ENST00000568561 CREBL2O60519 120 aaPredicted RBP11.65□□□□□ -0.54
NME3-211ENST00000568561 GGCTO75223 188 aaKnown RBP11.65□□□□□ -0.54
NME3-211ENST00000568561 NDUFB8O95169 186 aa11.65□□□□□ -0.54
NME3-211ENST00000568561 IL6RP08887 468 aaPredicted RBP11.65□□□□□ -0.54
NME3-211ENST00000568561 IGKV1-13P0DP09 117 aa11.65□□□□□ -0.54
NME3-211ENST00000568561 MYOD1P15172 320 aa11.65□□□□□ -0.54
NME3-211ENST00000568561 AREGP15514 252 aa11.65□□□□□ -0.54
NME3-211ENST00000568561 SSX1Q16384 188 aa11.65□□□□□ -0.54
NME3-211ENST00000568561 ZNF645Q8N7E2 425 aa11.65□□□□□ -0.54
NME3-211ENST00000568561 GPHA2Q96T91 129 aa11.65□□□□□ -0.54
NME3-211ENST00000568561 Q9H521 79 aa11.65□□□□□ -0.54
NME3-211ENST00000568561 RBMX2Q9Y388 322 aaKnown RBP11.65□□□□□ -0.54
NME3-211ENST00000568561 DPPA5A6NC42 116 aa11.64□□□□□ -0.55
NME3-211ENST00000568561 PDCD5O14737 125 aa11.64□□□□□ -0.55
NME3-211ENST00000568561 IGLV2-14P01704 120 aa11.64□□□□□ -0.55
NME3-211ENST00000568561 RAB6AP20340 208 aa11.64□□□□□ -0.55
NME3-211ENST00000568561 ARL3P36405 182 aa11.64□□□□□ -0.55
NME3-211ENST00000568561 RPL27AP46776 148 aaKnown RBP11.64□□□□□ -0.55
NME3-211ENST00000568561 PSMD7P51665 324 aa11.64□□□□□ -0.55
NME3-211ENST00000568561 CLEC19AQ6UXS0 136 aa11.64□□□□□ -0.55
NME3-211ENST00000568561 Q6ZS49 121 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms