RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 IGKV1D-8A0A087WSZ0 117 aa12.94□□□□□ -0.34
USB1-211ENST00000565662 LINC00473A8K010 186 aa12.94□□□□□ -0.34
USB1-211ENST00000565662 SSX5O60225 188 aa12.94□□□□□ -0.34
USB1-211ENST00000565662 SAP30O75446 220 aa12.94□□□□□ -0.34
USB1-211ENST00000565662 OR9G9P0C7N8 305 aa12.94□□□□□ -0.34
USB1-211ENST00000565662 SAA1P0DJI8 122 aaPredicted RBP12.94□□□□□ -0.34
USB1-211ENST00000565662 ECI1P42126 302 aa12.94□□□□□ -0.34
USB1-211ENST00000565662 TMEM69Q5SWH9 247 aa12.94□□□□□ -0.34
USB1-211ENST00000565662 OR13F1Q8NGS4 319 aa12.94□□□□□ -0.34
USB1-211ENST00000565662 OR4A5Q8NH83 315 aa12.94□□□□□ -0.34
USB1-211ENST00000565662 DCUN1D4Q92564 292 aa12.94□□□□□ -0.34
USB1-211ENST00000565662 C5orf30Q96GV9 206 aa12.94□□□□□ -0.34
USB1-211ENST00000565662 OR5B12Q96R08 314 aa12.94□□□□□ -0.34
USB1-211ENST00000565662 COA4Q9NYJ1 87 aa12.94□□□□□ -0.34
USB1-211ENST00000565662 ELF5Q9UKW6 265 aaPredicted RBP12.94□□□□□ -0.34
USB1-211ENST00000565662 SMIM31A0A1B0GVY4 71 aa12.93□□□□□ -0.34
USB1-211ENST00000565662 OR2A4O95047 310 aa12.93□□□□□ -0.34
USB1-211ENST00000565662 PPYP01298 95 aa12.93□□□□□ -0.34
USB1-211ENST00000565662 CLEC2LP0C7M8 214 aa12.93□□□□□ -0.34
USB1-211ENST00000565662 S100GP29377 79 aa12.93□□□□□ -0.34
USB1-211ENST00000565662 HERV-K104P61576 105 aa12.93□□□□□ -0.34
USB1-211ENST00000565662 ASPHD1Q5U4P2 390 aa12.93□□□□□ -0.34
USB1-211ENST00000565662 THOC7Q6I9Y2 204 aaKnown RBP12.93□□□□□ -0.34
USB1-211ENST00000565662 ACSM6Q6P461 480 aa12.93□□□□□ -0.34
USB1-211ENST00000565662 OR5H6Q8NGV6 325 aa12.93□□□□□ -0.34
USB1-211ENST00000565662 GIMAP1Q8WWP7 306 aa12.93□□□□□ -0.34
USB1-211ENST00000565662 AP3S1Q92572 193 aa12.93□□□□□ -0.34
USB1-211ENST00000565662 SLC25A46Q96AG3 418 aa12.93□□□□□ -0.34
USB1-211ENST00000565662 YIPF6Q96EC8 236 aa12.93□□□□□ -0.34
USB1-211ENST00000565662 MS4A10Q96PG2 267 aa12.93□□□□□ -0.34
USB1-211ENST00000565662 OR2A7Q96R45 310 aa12.93□□□□□ -0.34
USB1-211ENST00000565662 SCOCQ9UIL1 159 aa12.93□□□□□ -0.34
USB1-211ENST00000565662 IGHV4OR15-8A0A075B7B6 117 aa12.92□□□□□ -0.34
USB1-211ENST00000565662 A0A087WW49 117 aa12.92□□□□□ -0.34
USB1-211ENST00000565662 TRIM64CA6NLI5 447 aa12.92□□□□□ -0.34
USB1-211ENST00000565662 SRRM4A7MD48 611 aaKnown RBP12.92□□□□□ -0.34
USB1-211ENST00000565662 CYB5BO43169 146 aa12.92□□□□□ -0.34
USB1-211ENST00000565662 KBTBD11O94819 623 aa12.92□□□□□ -0.34
USB1-211ENST00000565662 FCGR2CP31995 323 aa12.92□□□□□ -0.34
USB1-211ENST00000565662 LINC00205P59089 165 aa12.92□□□□□ -0.34
USB1-211ENST00000565662 VAX1Q5SQQ9 334 aa12.92□□□□□ -0.34
USB1-211ENST00000565662 MFSD4AQ8N468 514 aa12.92□□□□□ -0.34
USB1-211ENST00000565662 DLX4Q92988 240 aaPredicted RBP12.92□□□□□ -0.34
USB1-211ENST00000565662 RBMXL1Q96E39 390 aaKnown RBP12.92□□□□□ -0.34
USB1-211ENST00000565662 RNF167Q9H6Y7 350 aa12.92□□□□□ -0.34
USB1-211ENST00000565662 ZNF257Q9Y2Q1 563 aa12.92□□□□□ -0.34
USB1-211ENST00000565662 MSGN1A6NI15 193 aa12.91□□□□□ -0.34
USB1-211ENST00000565662 LY86O95711 162 aa12.91□□□□□ -0.34
USB1-211ENST00000565662 TAS2R31P59538 309 aa12.91□□□□□ -0.34
USB1-211ENST00000565662 SSBP2P81877 361 aaPredicted RBP12.91□□□□□ -0.34
USB1-211ENST00000565662 ZNF343Q6P1L6 599 aa12.91□□□□□ -0.34
USB1-211ENST00000565662 CMTM1Q8IZ96 169 aa12.91□□□□□ -0.34
USB1-211ENST00000565662 SAMD12Q8N8I0 201 aa12.91□□□□□ -0.34
USB1-211ENST00000565662 ADAD2Q8NCV1 583 aaKnown RBP12.91□□□□□ -0.34
USB1-211ENST00000565662 OR5T1Q8NG75 326 aa12.91□□□□□ -0.34
USB1-211ENST00000565662 TMEM167AQ8TBQ9 72 aa12.91□□□□□ -0.34
USB1-211ENST00000565662 SECTM1Q8WVN6 248 aa12.91□□□□□ -0.34
USB1-211ENST00000565662 SNAPC3Q92966 411 aa12.91□□□□□ -0.34
USB1-211ENST00000565662 SRSF8Q9BRL6 282 aaKnown RBP12.91□□□□□ -0.34
USB1-211ENST00000565662 ZNF430Q9H8G1 570 aaPredicted RBP12.91□□□□□ -0.34
USB1-211ENST00000565662 SCPEP1Q9HB40 452 aa12.91□□□□□ -0.34
USB1-211ENST00000565662 BET1LQ9NYM9 111 aa12.91□□□□□ -0.34
USB1-211ENST00000565662 PEF1Q9UBV8 284 aaKnown RBP12.91□□□□□ -0.34
USB1-211ENST00000565662 SMAD5-AS1Q9Y6J3 95 aa12.91□□□□□ -0.34
USB1-211ENST00000565662 IGKV1D-13A0A0B4J2D9 117 aa12.9□□□□□ -0.34
USB1-211ENST00000565662 DPPA5A6NC42 116 aa12.9□□□□□ -0.34
USB1-211ENST00000565662 HPRT1P00492 218 aa12.9□□□□□ -0.34
USB1-211ENST00000565662 IGLV2-14P01704 120 aa12.9□□□□□ -0.34
USB1-211ENST00000565662 IGHV3-11P01762 117 aa12.9□□□□□ -0.34
USB1-211ENST00000565662 APOA1P02647 267 aa12.9□□□□□ -0.34
USB1-211ENST00000565662 IGKV1-13P0DP09 117 aa12.9□□□□□ -0.34
USB1-211ENST00000565662 HIST1H1BP16401 226 aaKnown RBP12.9□□□□□ -0.34
USB1-211ENST00000565662 PRSS3P35030 304 aa12.9□□□□□ -0.34
USB1-211ENST00000565662 SLURP1P55000 103 aa12.9□□□□□ -0.34
USB1-211ENST00000565662 PJVKQ0ZLH3 352 aa12.9□□□□□ -0.34
USB1-211ENST00000565662 EIF4EBP1Q13541 118 aaPredicted RBP12.9□□□□□ -0.34
USB1-211ENST00000565662 LPCAT3Q6P1A2 487 aa12.9□□□□□ -0.34
USB1-211ENST00000565662 MZT2AQ6P582 158 aa12.9□□□□□ -0.34
USB1-211ENST00000565662 TTC9CQ8N5M4 171 aa12.9□□□□□ -0.34
USB1-211ENST00000565662 NECAP1Q8NC96 275 aa12.9□□□□□ -0.34
USB1-211ENST00000565662 C15orf40Q8WUR7 153 aa12.9□□□□□ -0.34
USB1-211ENST00000565662 SLC5A7Q9GZV3 580 aa12.9□□□□□ -0.34
USB1-211ENST00000565662 TAS2R8Q9NYW2 309 aa12.9□□□□□ -0.34
USB1-211ENST00000565662 SIGLEC8Q9NYZ4 499 aa12.9□□□□□ -0.34
USB1-211ENST00000565662 COMMD9Q9P000 198 aa12.9□□□□□ -0.34
USB1-211ENST00000565662 PEMTQ9UBM1 199 aa12.9□□□□□ -0.34
USB1-211ENST00000565662 ANAPC10Q9UM13 185 aa12.9□□□□□ -0.34
USB1-211ENST00000565662 LSM4Q9Y4Z0 139 aaKnown RBP12.9□□□□□ -0.34
USB1-211ENST00000565662 NPIPB5A8MRT5 1133 aa12.89□□□□□ -0.35
USB1-211ENST00000565662 H0Y980 276 aa12.89□□□□□ -0.35
USB1-211ENST00000565662 SULT1C2O00338 296 aa12.89□□□□□ -0.35
USB1-211ENST00000565662 TPPPO94811 219 aa12.89□□□□□ -0.35
USB1-211ENST00000565662 NQO2P16083 231 aa12.89□□□□□ -0.35
USB1-211ENST00000565662 RPS19P39019 145 aaKnown RBP12.89□□□□□ -0.35
USB1-211ENST00000565662 RPL27AP46776 148 aaKnown RBP12.89□□□□□ -0.35
USB1-211ENST00000565662 TAS2R20P59543 309 aa12.89□□□□□ -0.35
USB1-211ENST00000565662 RPL8P62917 257 aaKnown RBP12.89□□□□□ -0.35
USB1-211ENST00000565662 POU2AF1Q16633 256 aa12.89□□□□□ -0.35
USB1-211ENST00000565662 RPEL1Q2QD12 228 aa12.89□□□□□ -0.35
USB1-211ENST00000565662 HSD17B13Q7Z5P4 300 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms