RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 PHOSPHO2Q8TCD6 241 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 WFDC5Q8TCV5 224 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 GNPDA2Q8TDQ7 276 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 ZFP3Q96NJ6 502 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 MED18Q9BUE0 208 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 MS4A8Q9BY19 250 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 NXF2Q9GZY0 626 aaKnown RBP2.57□□□□□ -2
LINC00560-201ENST00000564593 UCK1Q9HA47 277 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 BCL2L10Q9HD36 194 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 SDHAF3Q9NRP4 125 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 COPZ2Q9P299 210 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 SCML1Q9UN30 329 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 BAIAP2Q9UQB8 552 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 ZNF780BQ9Y6R6 833 aa2.57□□□□□ -2
LINC00560-201ENST00000564593 SNRNP200O75643 2136 aaKnown RBP2.56□□□□□ -2
LINC00560-201ENST00000564593 SCN3AQ9NY46 2000 aa2.56□□□□□ -2
LINC00560-201ENST00000564593 DSPPQ9NZW4 1301 aa2.56□□□□□ -2
LINC00560-201ENST00000564593 IGHV6-1A0A0B4J1U7 121 aa2.56□□□□□ -2
LINC00560-201ENST00000564593 A8MWL6 223 aa2.56□□□□□ -2
LINC00560-201ENST00000564593 RNASEK-C17orf49H0YIS7 233 aa2.56□□□□□ -2
LINC00560-201ENST00000564593 ITGB1BP1O14713 200 aa2.56□□□□□ -2
LINC00560-201ENST00000564593 CCL16O15467 120 aa2.56□□□□□ -2
LINC00560-201ENST00000564593 AQP9O43315 295 aa2.56□□□□□ -2
LINC00560-201ENST00000564593 ORC5O43913 435 aa2.56□□□□□ -2
LINC00560-201ENST00000564593 ENTPD6O75354 484 aa2.56□□□□□ -2
LINC00560-201ENST00000564593 POP7O75817 140 aaKnown RBP2.56□□□□□ -2
LINC00560-201ENST00000564593 OR5F1O95221 314 aa2.56□□□□□ -2
LINC00560-201ENST00000564593 LHBP01229 141 aa2.56□□□□□ -2
LINC00560-201ENST00000564593 IFNGP01579 166 aa2.56□□□□□ -2
LINC00560-201ENST00000564593 APODP05090 189 aa2.56□□□□□ -2
LINC00560-201ENST00000564593 HLA-EP13747 358 aa2.56□□□□□ -2
LINC00560-201ENST00000564593 GADD45AP24522 165 aa2.56□□□□□ -2
LINC00560-201ENST00000564593 HOXA6P31267 233 aa2.56□□□□□ -2
LINC00560-201ENST00000564593 CA5AP35218 305 aa2.56□□□□□ -2
LINC00560-201ENST00000564593 TGFBR2P37173 567 aa2.56□□□□□ -2
LINC00560-201ENST00000564593 MAP2K4P45985 399 aa2.56□□□□□ -2
LINC00560-201ENST00000564593 HAAOP46952 286 aa2.56□□□□□ -2
LINC00560-201ENST00000564593 GALR1P47211 349 aa2.56□□□□□ -2
LINC00560-201ENST00000564593 FAM27D1Q5T7N8 215 aa2.56□□□□□ -2
LINC00560-201ENST00000564593 PRR9Q5T870 116 aa2.56□□□□□ -2
LINC00560-201ENST00000564593 C12orf73Q69YU5 71 aa2.56□□□□□ -2
LINC00560-201ENST00000564593 OOSP2Q86WS3 158 aa2.56□□□□□ -2
LINC00560-201ENST00000564593 OR52N1Q8NH53 320 aa2.56□□□□□ -2
LINC00560-201ENST00000564593 ZFAND1Q8TCF1 268 aa2.56□□□□□ -2
LINC00560-201ENST00000564593 MAL2Q969L2 176 aa2.56□□□□□ -2
LINC00560-201ENST00000564593 TBL1XR1Q9BZK7 514 aa2.56□□□□□ -2
LINC00560-201ENST00000564593 C11orf49Q9H6J7 331 aa2.56□□□□□ -2
LINC00560-201ENST00000564593 NMNAT1Q9HAN9 279 aaPredicted RBP2.56□□□□□ -2
LINC00560-201ENST00000564593 ACER3Q9NUN7 267 aa2.56□□□□□ -2
LINC00560-201ENST00000564593 EMC3Q9P0I2 261 aa2.56□□□□□ -2
LINC00560-201ENST00000564593 TAC3Q9UHF0 121 aa2.56□□□□□ -2
LINC00560-201ENST00000564593 WIF1Q9Y5W5 379 aa2.56□□□□□ -2
LINC00560-201ENST00000564593 V9GYY9 64 aa2.56□□□□□ -2
LINC00560-201ENST00000564593 FANCMQ8IYD8 2048 aa2.55□□□□□ -2
LINC00560-201ENST00000564593 KIAA0100Q14667 2235 aaKnown RBP2.55□□□□□ -2
LINC00560-201ENST00000564593 LOC102724200A0A096LPH7 203 aaPredicted RBP2.55□□□□□ -2
LINC00560-201ENST00000564593 ANKRD20A5PA0PJZ0 165 aa2.55□□□□□ -2
LINC00560-201ENST00000564593 ZNF98A6NK75 572 aa2.55□□□□□ -2
LINC00560-201ENST00000564593 RIIAD1A6NNX1 92 aa2.55□□□□□ -2
LINC00560-201ENST00000564593 SEC14L6B5MCN3 397 aa2.55□□□□□ -2
LINC00560-201ENST00000564593 C5orf67F2Z3F1 127 aa2.55□□□□□ -2
LINC00560-201ENST00000564593 OR7C2O60412 319 aa2.55□□□□□ -2
LINC00560-201ENST00000564593 ARL6IP5O75915 188 aa2.55□□□□□ -2
LINC00560-201ENST00000564593 OPN1SWP03999 348 aa2.55□□□□□ -2
LINC00560-201ENST00000564593 CD5P06127 495 aa2.55□□□□□ -2
LINC00560-201ENST00000564593 DBIP07108 87 aaKnown RBP2.55□□□□□ -2
LINC00560-201ENST00000564593 GUSBP08236 651 aa2.55□□□□□ -2
LINC00560-201ENST00000564593 TFPTP0C1Z6 253 aa2.55□□□□□ -2
LINC00560-201ENST00000564593 OR5AL1P0C617 328 aa2.55□□□□□ -2
LINC00560-201ENST00000564593 HIST1H1TP22492 207 aaPredicted RBP2.55□□□□□ -2
LINC00560-201ENST00000564593 HTR2CP28335 458 aa2.55□□□□□ -2
LINC00560-201ENST00000564593 ARR3P36575 388 aa2.55□□□□□ -2
LINC00560-201ENST00000564593 OR2B6P58173 313 aa2.55□□□□□ -2
LINC00560-201ENST00000564593 AP3S2P59780 193 aa2.55□□□□□ -2
LINC00560-201ENST00000564593 LSM3P62310 102 aaKnown RBP2.55□□□□□ -2
LINC00560-201ENST00000564593 PSPHP78330 225 aa2.55□□□□□ -2
LINC00560-201ENST00000564593 PRDX1Q06830 199 aaKnown RBP2.55□□□□□ -2
LINC00560-201ENST00000564593 TSPAN31Q12999 210 aa2.55□□□□□ -2
LINC00560-201ENST00000564593 BTN1A1Q13410 526 aa2.55□□□□□ -2
LINC00560-201ENST00000564593 ZNHIT3Q15649 155 aaPredicted RBP2.55□□□□□ -2
LINC00560-201ENST00000564593 NDUFAF6Q330K2 333 aa2.55□□□□□ -2
LINC00560-201ENST00000564593 C9orf64Q5T6V5 341 aa2.55□□□□□ -2
LINC00560-201ENST00000564593 NXNL2Q5VZ03 156 aa2.55□□□□□ -2
LINC00560-201ENST00000564593 TNFAIP8L2Q6P589 184 aaPredicted RBP2.55□□□□□ -2
LINC00560-201ENST00000564593 FAM131AQ6UXB0 335 aa2.55□□□□□ -2
LINC00560-201ENST00000564593 RASSF6Q6ZTQ3 369 aa2.55□□□□□ -2
LINC00560-201ENST00000564593 LRRC28Q86X40 367 aaPredicted RBP2.55□□□□□ -2
LINC00560-201ENST00000564593 LRRC25Q8N386 305 aaPredicted RBP2.55□□□□□ -2
LINC00560-201ENST00000564593 OR4D6Q8NGJ1 314 aa2.55□□□□□ -2
LINC00560-201ENST00000564593 OR5AK3PQ8NH89 298 aa2.55□□□□□ -2
LINC00560-201ENST00000564593 HGDQ93099 445 aa2.55□□□□□ -2
LINC00560-201ENST00000564593 SLC35B4Q969S0 331 aa2.55□□□□□ -2
LINC00560-201ENST00000564593 COX14Q96I36 57 aa2.55□□□□□ -2
LINC00560-201ENST00000564593 C7orf50Q9BRJ6 194 aaKnown RBP2.55□□□□□ -2
LINC00560-201ENST00000564593 TAPBPLQ9BX59 468 aa2.55□□□□□ -2
LINC00560-201ENST00000564593 TSSK6Q9BXA6 273 aa2.55□□□□□ -2
LINC00560-201ENST00000564593 OR2S2Q9NQN1 319 aa2.55□□□□□ -2
LINC00560-201ENST00000564593 MRM2Q9UI43 246 aaKnown RBP2.55□□□□□ -2
LINC00560-201ENST00000564593 PUS1Q9Y606 427 aaKnown RBP eCLIP2.55□□□□□ -2
LINC00560-201ENST00000564593 SVILO95425 2214 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms