RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 ZNRD1Q9P1U0 126 aa7.74□□□□□ -1.17
LINC00838-201ENST00000562956 RPUSD1Q9UJJ7 312 aaKnown RBP7.74□□□□□ -1.17
LINC00838-201ENST00000562956 A0A1W2PPE2 198 aa7.73□□□□□ -1.17
LINC00838-201ENST00000562956 NDUFB3O43676 98 aa7.73□□□□□ -1.17
LINC00838-201ENST00000562956 SYNGR2O43760 224 aa7.73□□□□□ -1.17
LINC00838-201ENST00000562956 RAB7AP51149 207 aa7.73□□□□□ -1.17
LINC00838-201ENST00000562956 MEF2CQ06413 473 aaPredicted RBP7.73□□□□□ -1.17
LINC00838-201ENST00000562956 AWAT1Q58HT5 328 aa7.73□□□□□ -1.17
LINC00838-201ENST00000562956 LRRC10Q5BKY1 277 aa7.73□□□□□ -1.17
LINC00838-201ENST00000562956 TMEM217Q8N7C4 229 aa7.73□□□□□ -1.17
LINC00838-201ENST00000562956 SLC25A31Q9H0C2 315 aa7.73□□□□□ -1.17
LINC00838-201ENST00000562956 ARV1Q9H2C2 271 aa7.73□□□□□ -1.17
LINC00838-201ENST00000562956 KAAG1Q9UBP8 84 aa7.73□□□□□ -1.17
LINC00838-201ENST00000562956 DIDO1Q9BTC0 2240 aaKnown RBP7.73□□□□□ -1.17
LINC00838-201ENST00000562956 MARCH11A6NNE9 402 aa7.73□□□□□ -1.17
LINC00838-201ENST00000562956 PPOXP50336 477 aa7.73□□□□□ -1.17
LINC00838-201ENST00000562956 MIDNQ504T8 468 aa7.73□□□□□ -1.17
LINC00838-201ENST00000562956 PYY3Q5JQD4 70 aa7.73□□□□□ -1.17
LINC00838-201ENST00000562956 C10orf91Q5T1B1 145 aa7.73□□□□□ -1.17
LINC00838-201ENST00000562956 RBMXL1Q96E39 390 aaKnown RBP7.73□□□□□ -1.17
LINC00838-201ENST00000562956 ZNF714Q96N38 554 aa7.73□□□□□ -1.17
LINC00838-201ENST00000562956 RAB40CQ96S21 281 aa7.73□□□□□ -1.17
LINC00838-201ENST00000562956 ARFGEF3Q5TH69 2177 aa7.72□□□□□ -1.17
LINC00838-201ENST00000562956 BORCS7-ASMTA0A0B4J1R7 106 aa7.72□□□□□ -1.17
LINC00838-201ENST00000562956 RAB29O14966 203 aa7.72□□□□□ -1.17
LINC00838-201ENST00000562956 LY6HO94772 140 aa7.72□□□□□ -1.17
LINC00838-201ENST00000562956 SOD3P08294 240 aa7.72□□□□□ -1.17
LINC00838-201ENST00000562956 PLA2G5P39877 138 aa7.72□□□□□ -1.17
LINC00838-201ENST00000562956 DYNLT3P51808 116 aa7.72□□□□□ -1.17
LINC00838-201ENST00000562956 NDUFA6P56556 154 aa7.72□□□□□ -1.17
LINC00838-201ENST00000562956 SSTP61278 116 aa7.72□□□□□ -1.17
LINC00838-201ENST00000562956 H2BFWTQ7Z2G1 175 aa7.72□□□□□ -1.17
LINC00838-201ENST00000562956 LYG1Q8N1E2 194 aa7.72□□□□□ -1.17
LINC00838-201ENST00000562956 OR5C1Q8NGR4 320 aa7.72□□□□□ -1.17
LINC00838-201ENST00000562956 CD300LFQ8TDQ1 290 aa7.72□□□□□ -1.17
LINC00838-201ENST00000562956 TCEAL7Q9BRU2 100 aa7.72□□□□□ -1.17
LINC00838-201ENST00000562956 SH3BGRL3Q9H299 93 aa7.72□□□□□ -1.17
LINC00838-201ENST00000562956 GAL3ST2Q9H3Q3 398 aa7.72□□□□□ -1.17
LINC00838-201ENST00000562956 METTL1Q9UBP6 276 aaKnown RBP7.72□□□□□ -1.17
LINC00838-201ENST00000562956 LPAR3Q9UBY5 353 aa7.72□□□□□ -1.17
LINC00838-201ENST00000562956 GAB2Q9UQC2 676 aa7.72□□□□□ -1.17
LINC00838-201ENST00000562956 WSB1Q9Y6I7 421 aa7.72□□□□□ -1.17
LINC00838-201ENST00000562956 HRNRQ86YZ3 2850 aaPredicted RBP7.72□□□□□ -1.17
LINC00838-201ENST00000562956 DCHS2Q6V1P9 2916 aa7.72□□□□□ -1.17
LINC00838-201ENST00000562956 A0A1W2PPR1 153 aa7.72□□□□□ -1.17
LINC00838-201ENST00000562956 C7orf77A4D0Y5 90 aa7.72□□□□□ -1.17
LINC00838-201ENST00000562956 RAB5AP20339 215 aa7.72□□□□□ -1.17
LINC00838-201ENST00000562956 UBE2KP61086 200 aa7.72□□□□□ -1.17
LINC00838-201ENST00000562956 RPL23AP62750 156 aaKnown RBP7.72□□□□□ -1.17
LINC00838-201ENST00000562956 TNFRSF9Q07011 255 aa7.72□□□□□ -1.17
LINC00838-201ENST00000562956 TMEM267Q0VDI3 215 aaPredicted RBP7.72□□□□□ -1.17
LINC00838-201ENST00000562956 EIF5AL1Q6IS14 154 aaKnown RBP7.72□□□□□ -1.17
LINC00838-201ENST00000562956 SLC25A48Q6ZT89 311 aaKnown RBP7.72□□□□□ -1.17
LINC00838-201ENST00000562956 HSD17B11Q8NBQ5 300 aa7.72□□□□□ -1.17
LINC00838-201ENST00000562956 DDB2Q92466 427 aa7.72□□□□□ -1.17
LINC00838-201ENST00000562956 R3HDM4Q96D70 268 aa7.72□□□□□ -1.17
LINC00838-201ENST00000562956 C14orf144Q96I85 54 aa7.72□□□□□ -1.17
LINC00838-201ENST00000562956 GINS3Q9BRX5 216 aa7.72□□□□□ -1.17
LINC00838-201ENST00000562956 HSPB7Q9UBY9 170 aa7.72□□□□□ -1.17
LINC00838-201ENST00000562956 CEBPGP53567 150 aa7.72□□□□□ -1.17
LINC00838-201ENST00000562956 MRPS11P82912 194 aaKnown RBP7.72□□□□□ -1.17
LINC00838-201ENST00000562956 BAXQ07812 192 aa7.72□□□□□ -1.17
LINC00838-201ENST00000562956 TMEM30BQ3MIR4 351 aa7.72□□□□□ -1.17
LINC00838-201ENST00000562956 C11orf71Q6IPW1 123 aa7.72□□□□□ -1.17
LINC00838-201ENST00000562956 HEPN1Q6WQI6 88 aa7.72□□□□□ -1.17
LINC00838-201ENST00000562956 VKORC1L1Q8N0U8 176 aa7.72□□□□□ -1.17
LINC00838-201ENST00000562956 C15orf54Q8N8G6 183 aa7.72□□□□□ -1.17
LINC00838-201ENST00000562956 S1PR3Q99500 378 aa7.72□□□□□ -1.17
LINC00838-201ENST00000562956 RBKSQ9H477 322 aa7.72□□□□□ -1.17
LINC00838-201ENST00000562956 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.72□□□□□ -1.17
LINC00838-201ENST00000562956 CBLN4Q9NTU7 201 aa7.72□□□□□ -1.17
LINC00838-201ENST00000562956 PSENENQ9NZ42 101 aa7.72□□□□□ -1.17
LINC00838-201ENST00000562956 RALYQ9UKM9 306 aaKnown RBP7.72□□□□□ -1.17
LINC00838-201ENST00000562956 LAMP3Q9UQV4 416 aa7.72□□□□□ -1.17
LINC00838-201ENST00000562956 CFAP46Q8IYW2 2715 aa7.71□□□□□ -1.17
LINC00838-201ENST00000562956 FAM90A26D6RGX4 464 aa7.71□□□□□ -1.18
LINC00838-201ENST00000562956 AP4M1O00189 453 aa7.71□□□□□ -1.18
LINC00838-201ENST00000562956 HPRT1P00492 218 aa7.71□□□□□ -1.18
LINC00838-201ENST00000562956 AGAP20933 346 aa7.71□□□□□ -1.18
LINC00838-201ENST00000562956 RPS10P46783 165 aaKnown RBP7.71□□□□□ -1.18
LINC00838-201ENST00000562956 SULT1A2P50226 295 aa7.71□□□□□ -1.18
LINC00838-201ENST00000562956 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.71□□□□□ -1.18
LINC00838-201ENST00000562956 DMRT1Q9Y5R6 373 aa7.71□□□□□ -1.18
LINC00838-201ENST00000562956 RFNGQ9Y644 331 aa7.71□□□□□ -1.18
LINC00838-201ENST00000562956 C19orf84I3L1E1 186 aa7.71□□□□□ -1.18
LINC00838-201ENST00000562956 RBFOX2O43251 390 aaKnown RBP eCLIP7.71□□□□□ -1.18
LINC00838-201ENST00000562956 MT-ND4LP03901 98 aa7.71□□□□□ -1.18
LINC00838-201ENST00000562956 OR9G9P0C7N8 305 aa7.71□□□□□ -1.18
LINC00838-201ENST00000562956 SULT1A1P50225 295 aa7.71□□□□□ -1.18
LINC00838-201ENST00000562956 KIAA0141Q14154 515 aaPredicted RBP7.71□□□□□ -1.18
LINC00838-201ENST00000562956 USF2Q15853 346 aaPredicted RBP7.71□□□□□ -1.18
LINC00838-201ENST00000562956 SSX2Q16385 188 aa7.71□□□□□ -1.18
LINC00838-201ENST00000562956 STX12Q86Y82 276 aa7.71□□□□□ -1.18
LINC00838-201ENST00000562956 OR10A7Q8NGE5 316 aa7.71□□□□□ -1.18
LINC00838-201ENST00000562956 OR10D4PQ8NGN7 298 aa7.71□□□□□ -1.18
LINC00838-201ENST00000562956 SMIM8Q96KF7 97 aa7.71□□□□□ -1.18
LINC00838-201ENST00000562956 TMPRSS5Q9H3S3 457 aa7.71□□□□□ -1.18
LINC00838-201ENST00000562956 DSCAML1Q8TD84 2053 aa7.71□□□□□ -1.18
LINC00838-201ENST00000562956 USF3Q68DE3 2245 aa7.7□□□□□ -1.18
LINC00838-201ENST00000562956 HIVEP3Q5T1R4 2406 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms