RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 C9orf139Q6ZV77 190 aa5.61□□□□□ -1.51
TSPAN3-209ENST00000560715 MRGPRGQ86SM5 289 aa5.61□□□□□ -1.51
TSPAN3-209ENST00000560715 LGI3Q8N145 548 aa5.61□□□□□ -1.51
TSPAN3-209ENST00000560715 OR1K1Q8NGR3 316 aa5.61□□□□□ -1.51
TSPAN3-209ENST00000560715 PLPPR1Q8TBJ4 325 aa5.61□□□□□ -1.51
TSPAN3-209ENST00000560715 RSG1Q9BU20 258 aa5.61□□□□□ -1.51
TSPAN3-209ENST00000560715 KCNS2Q9ULS6 477 aa5.61□□□□□ -1.51
TSPAN3-209ENST00000560715 RNF114Q9Y508 228 aa5.61□□□□□ -1.51
TSPAN3-209ENST00000560715 DOCK8Q8NF50 2099 aa5.6□□□□□ -1.51
TSPAN3-209ENST00000560715 TRIOBPQ9H2D6 2365 aa5.6□□□□□ -1.51
TSPAN3-209ENST00000560715 IGSF23A1L1A6 192 aa5.6□□□□□ -1.51
TSPAN3-209ENST00000560715 IGLON5A6NGN9 336 aa5.6□□□□□ -1.51
TSPAN3-209ENST00000560715 OR2T8A6NH00 312 aa5.6□□□□□ -1.51
TSPAN3-209ENST00000560715 SDCBPO00560 298 aaPredicted RBP5.6□□□□□ -1.51
TSPAN3-209ENST00000560715 CHST1O43916 411 aa5.6□□□□□ -1.51
TSPAN3-209ENST00000560715 HPNP05981 417 aa5.6□□□□□ -1.51
TSPAN3-209ENST00000560715 ZNF93P35789 620 aaPredicted RBP5.6□□□□□ -1.51
TSPAN3-209ENST00000560715 RPS27P42677 84 aaKnown RBP5.6□□□□□ -1.51
TSPAN3-209ENST00000560715 YPEL3P61236 119 aaPredicted RBP5.6□□□□□ -1.51
TSPAN3-209ENST00000560715 PLPPR5Q32ZL2 321 aa5.6□□□□□ -1.51
TSPAN3-209ENST00000560715 ZNF793Q6ZN11 406 aa5.6□□□□□ -1.51
TSPAN3-209ENST00000560715 SIGLECL1Q8N7X8 197 aa5.6□□□□□ -1.51
TSPAN3-209ENST00000560715 MBD3L1Q8WWY6 194 aa5.6□□□□□ -1.51
TSPAN3-209ENST00000560715 AMELYQ99218 206 aa5.6□□□□□ -1.51
TSPAN3-209ENST00000560715 RAB11FIP5Q9BXF6 653 aa5.6□□□□□ -1.51
TSPAN3-209ENST00000560715 C11orf1Q9H5F2 150 aa5.6□□□□□ -1.51
TSPAN3-209ENST00000560715 TMEM38BQ9NVV0 291 aa5.6□□□□□ -1.51
TSPAN3-209ENST00000560715 FAM24AA6NFZ4 105 aa5.6□□□□□ -1.51
TSPAN3-209ENST00000560715 CEBPZOSA8MTT3 80 aa5.6□□□□□ -1.51
TSPAN3-209ENST00000560715 LMO7DNF2Z398 122 aa5.6□□□□□ -1.51
TSPAN3-209ENST00000560715 TRAPPC2LH3BP13 241 aa5.6□□□□□ -1.51
TSPAN3-209ENST00000560715 UTS2O95399 124 aa5.6□□□□□ -1.51
TSPAN3-209ENST00000560715 MT-CO2P00403 227 aa5.6□□□□□ -1.51
TSPAN3-209ENST00000560715 IFNA1P01562 189 aa5.6□□□□□ -1.51
TSPAN3-209ENST00000560715 HLA-HP01893 362 aa5.6□□□□□ -1.51
TSPAN3-209ENST00000560715 GP9P14770 177 aa5.6□□□□□ -1.51
TSPAN3-209ENST00000560715 HIST1H1DP16402 221 aaKnown RBP5.6□□□□□ -1.51
TSPAN3-209ENST00000560715 GDF1P27539 372 aa5.6□□□□□ -1.51
TSPAN3-209ENST00000560715 LHX2P50458 406 aa5.6□□□□□ -1.51
TSPAN3-209ENST00000560715 LCN6P62502 163 aa5.6□□□□□ -1.51
TSPAN3-209ENST00000560715 RUNX1Q01196 453 aa5.6□□□□□ -1.51
TSPAN3-209ENST00000560715 C5orf64Q2M2E5 130 aa5.6□□□□□ -1.51
TSPAN3-209ENST00000560715 C1orf140Q5VVS0 124 aa5.6□□□□□ -1.51
TSPAN3-209ENST00000560715 UBALD2Q8IYN6 164 aa5.6□□□□□ -1.51
TSPAN3-209ENST00000560715 ELSPBP1Q96BH3 223 aa5.6□□□□□ -1.51
TSPAN3-209ENST00000560715 PLEKHF2Q9H8W4 249 aa5.6□□□□□ -1.51
TSPAN3-209ENST00000560715 CES1P1Q9UKY3 287 aa5.6□□□□□ -1.51
TSPAN3-209ENST00000560715 PRRC2BQ5JSZ5 2229 aaKnown RBP5.6□□□□□ -1.51
TSPAN3-209ENST00000560715 TRPM6Q9BX84 2022 aa5.59□□□□□ -1.51
TSPAN3-209ENST00000560715 CEP290O15078 2479 aa5.59□□□□□ -1.51
TSPAN3-209ENST00000560715 KBTBD11-OT1A0A1B0GTJ5 212 aa5.59□□□□□ -1.51
TSPAN3-209ENST00000560715 TMEM14DPA8MWL7 114 aa5.59□□□□□ -1.51
TSPAN3-209ENST00000560715 ZNF253O75346 499 aa5.59□□□□□ -1.51
TSPAN3-209ENST00000560715 IGLV1-40P01703 118 aa5.59□□□□□ -1.51
TSPAN3-209ENST00000560715 GPX1P07203 203 aa5.59□□□□□ -1.51
TSPAN3-209ENST00000560715 IGLC1P0CG04 106 aa5.59□□□□□ -1.51
TSPAN3-209ENST00000560715 MYOD1P15172 320 aa5.59□□□□□ -1.51
TSPAN3-209ENST00000560715 TMEM187Q14656 261 aa5.59□□□□□ -1.51
TSPAN3-209ENST00000560715 FAM78BQ5VT40 261 aa5.59□□□□□ -1.51
TSPAN3-209ENST00000560715 C9orf135Q5VTT2 229 aa5.59□□□□□ -1.51
TSPAN3-209ENST00000560715 SLC48A1Q6P1K1 146 aa5.59□□□□□ -1.51
TSPAN3-209ENST00000560715 COX8CQ7Z4L0 72 aa5.59□□□□□ -1.51
TSPAN3-209ENST00000560715 DEFB125Q8N687 156 aa5.59□□□□□ -1.51
TSPAN3-209ENST00000560715 NEXN-AS1Q8NBZ9 246 aa5.59□□□□□ -1.51
TSPAN3-209ENST00000560715 MDS2Q8NDY4 140 aa5.59□□□□□ -1.51
TSPAN3-209ENST00000560715 OTOSQ8NHW6 89 aa5.59□□□□□ -1.51
TSPAN3-209ENST00000560715 C18orf12Q96KH6 178 aa5.59□□□□□ -1.51
TSPAN3-209ENST00000560715 ZNF681Q96N22 645 aa5.59□□□□□ -1.51
TSPAN3-209ENST00000560715 PLA2G2FQ9BZM2 168 aa5.59□□□□□ -1.51
TSPAN3-209ENST00000560715 MMP17Q9ULZ9 603 aa5.59□□□□□ -1.51
TSPAN3-209ENST00000560715 SERINC4A6NH21 518 aa5.59□□□□□ -1.51
TSPAN3-209ENST00000560715 WNT2P09544 360 aa5.59□□□□□ -1.51
TSPAN3-209ENST00000560715 ERGP11308 486 aa5.59□□□□□ -1.51
TSPAN3-209ENST00000560715 CRISP2P16562 243 aa5.59□□□□□ -1.51
TSPAN3-209ENST00000560715 DRD3P35462 400 aa5.59□□□□□ -1.51
TSPAN3-209ENST00000560715 GPR6P46095 362 aaPredicted RBP5.59□□□□□ -1.51
TSPAN3-209ENST00000560715 PPP1CBP62140 327 aa5.59□□□□□ -1.51
TSPAN3-209ENST00000560715 PSG9Q00887 426 aa5.59□□□□□ -1.51
TSPAN3-209ENST00000560715 Q0VG73 95 aa5.59□□□□□ -1.51
TSPAN3-209ENST00000560715 CST6Q15828 149 aa5.59□□□□□ -1.51
TSPAN3-209ENST00000560715 HIST3H3Q16695 136 aa5.59□□□□□ -1.51
TSPAN3-209ENST00000560715 ACSF3Q4G176 576 aaPredicted RBP5.59□□□□□ -1.51
TSPAN3-209ENST00000560715 KCTD18Q6PI47 426 aaPredicted RBP5.59□□□□□ -1.51
TSPAN3-209ENST00000560715 LYZL2Q7Z4W2 148 aa5.59□□□□□ -1.51
TSPAN3-209ENST00000560715 UEVLDQ8IX04 471 aa5.59□□□□□ -1.51
TSPAN3-209ENST00000560715 ZNF440Q8IYI8 595 aa5.59□□□□□ -1.51
TSPAN3-209ENST00000560715 C5orf17Q8NAS9 161 aa5.59□□□□□ -1.51
TSPAN3-209ENST00000560715 ST6GALNAC3Q8NDV1 305 aa5.59□□□□□ -1.51
TSPAN3-209ENST00000560715 OR5C1Q8NGR4 320 aa5.59□□□□□ -1.51
TSPAN3-209ENST00000560715 OR2Y1Q8NGV0 311 aa5.59□□□□□ -1.51
TSPAN3-209ENST00000560715 NAT6Q93015 286 aa5.59□□□□□ -1.51
TSPAN3-209ENST00000560715 OR2V2Q96R30 315 aa5.59□□□□□ -1.51
TSPAN3-209ENST00000560715 ZDHHC11Q9H8X9 412 aa5.59□□□□□ -1.51
TSPAN3-209ENST00000560715 HHLA2Q9UM44 414 aa5.59□□□□□ -1.51
TSPAN3-209ENST00000560715 OR51B2Q9Y5P1 312 aa5.59□□□□□ -1.51
TSPAN3-209ENST00000560715 LAMA3Q16787 3333 aa5.59□□□□□ -1.52
TSPAN3-209ENST00000560715 CHD9Q3L8U1 2897 aa5.58□□□□□ -1.52
TSPAN3-209ENST00000560715 A0A0A6YYD4 124 aa5.58□□□□□ -1.52
TSPAN3-209ENST00000560715 TMEM250H0YL14 139 aa5.58□□□□□ -1.52
TSPAN3-209ENST00000560715 VENTXO95231 258 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms