RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 ZNF709Q8N972 641 aa6.69□□□□□ -1.34
SMAD3-212ENST00000559937 ZNRF1Q8ND25 227 aa6.69□□□□□ -1.34
SMAD3-212ENST00000559937 ZNF439Q8NDP4 499 aa6.69□□□□□ -1.34
SMAD3-212ENST00000559937 OR4A16Q8NH70 328 aa6.69□□□□□ -1.34
SMAD3-212ENST00000559937 RAB39BQ96DA2 213 aa6.69□□□□□ -1.34
SMAD3-212ENST00000559937 YPEL4Q96NS1 127 aa6.69□□□□□ -1.34
SMAD3-212ENST00000559937 S1PR3Q99500 378 aa6.69□□□□□ -1.34
SMAD3-212ENST00000559937 MANBALQ9NQG1 85 aa6.69□□□□□ -1.34
SMAD3-212ENST00000559937 SLC39A9Q9NUM3 307 aa6.69□□□□□ -1.34
SMAD3-212ENST00000559937 IDI2-AS1Q9NZ38 188 aa6.69□□□□□ -1.34
SMAD3-212ENST00000559937 GNG13Q9P2W3 67 aa6.69□□□□□ -1.34
SMAD3-212ENST00000559937 Q9UFV3 132 aa6.69□□□□□ -1.34
SMAD3-212ENST00000559937 WDR83OSQ9Y284 106 aa6.69□□□□□ -1.34
SMAD3-212ENST00000559937 PUS1Q9Y606 427 aaKnown RBP eCLIP6.69□□□□□ -1.34
SMAD3-212ENST00000559937 CADP27708 2225 aa6.69□□□□□ -1.34
SMAD3-212ENST00000559937 PLCE1Q9P212 2302 aa6.68□□□□□ -1.34
SMAD3-212ENST00000559937 ZGRF1Q86YA3 2104 aa6.68□□□□□ -1.34
SMAD3-212ENST00000559937 A0A1W2PPH5 198 aa6.68□□□□□ -1.34
SMAD3-212ENST00000559937 hADV38S2A0JD32 116 aa6.68□□□□□ -1.34
SMAD3-212ENST00000559937 FNDC10F2Z333 226 aa6.68□□□□□ -1.34
SMAD3-212ENST00000559937 TMEM250H0YL14 139 aa6.68□□□□□ -1.34
SMAD3-212ENST00000559937 RBMXL2O75526 392 aaKnown RBP6.68□□□□□ -1.34
SMAD3-212ENST00000559937 OR2C1O95371 312 aa6.68□□□□□ -1.34
SMAD3-212ENST00000559937 RAB5AP20339 215 aa6.68□□□□□ -1.34
SMAD3-212ENST00000559937 BMP5P22003 454 aa6.68□□□□□ -1.34
SMAD3-212ENST00000559937 VDAC2P45880 294 aaPredicted RBP6.68□□□□□ -1.34
SMAD3-212ENST00000559937 ATP5IP56385 69 aaPredicted RBP6.68□□□□□ -1.34
SMAD3-212ENST00000559937 TMPRSS3P57727 454 aa6.68□□□□□ -1.34
SMAD3-212ENST00000559937 OR2B8PP59922 312 aa6.68□□□□□ -1.34
SMAD3-212ENST00000559937 RELBQ01201 579 aa6.68□□□□□ -1.34
SMAD3-212ENST00000559937 RBPJQ06330 500 aa6.68□□□□□ -1.34
SMAD3-212ENST00000559937 MEF2CQ06413 473 aaPredicted RBP6.68□□□□□ -1.34
SMAD3-212ENST00000559937 HABP2Q14520 560 aaPredicted RBP6.68□□□□□ -1.34
SMAD3-212ENST00000559937 ACOT6Q3I5F7 207 aaPredicted RBP6.68□□□□□ -1.34
SMAD3-212ENST00000559937 SPRNQ5BIV9 151 aa6.68□□□□□ -1.34
SMAD3-212ENST00000559937 FAM90A2PQ658T7 463 aa6.68□□□□□ -1.34
SMAD3-212ENST00000559937 ACSM6Q6P461 480 aa6.68□□□□□ -1.34
SMAD3-212ENST00000559937 LCN15Q6UWW0 184 aa6.68□□□□□ -1.34
SMAD3-212ENST00000559937 ETV3LQ6ZN32 361 aa6.68□□□□□ -1.34
SMAD3-212ENST00000559937 C1orf87Q8N0U7 546 aa6.68□□□□□ -1.34
SMAD3-212ENST00000559937 CA5BP1Q8WTZ4 195 aa6.68□□□□□ -1.34
SMAD3-212ENST00000559937 LHX4Q969G2 390 aa6.68□□□□□ -1.34
SMAD3-212ENST00000559937 ZDHHC16Q969W1 377 aa6.68□□□□□ -1.34
SMAD3-212ENST00000559937 ABHD17AQ96GS6 310 aa6.68□□□□□ -1.34
SMAD3-212ENST00000559937 QTRT1Q9BXR0 403 aaKnown RBP6.68□□□□□ -1.34
SMAD3-212ENST00000559937 ACTR3CQ9C0K3 210 aaPredicted RBP6.68□□□□□ -1.34
SMAD3-212ENST00000559937 SAV1Q9H4B6 383 aaPredicted RBP6.68□□□□□ -1.34
SMAD3-212ENST00000559937 VSIRQ9H7M9 311 aa6.68□□□□□ -1.34
SMAD3-212ENST00000559937 NGBQ9NPG2 151 aa6.68□□□□□ -1.34
SMAD3-212ENST00000559937 KCNIP2Q9NS61 270 aa6.68□□□□□ -1.34
SMAD3-212ENST00000559937 RPUSD1Q9UJJ7 312 aaKnown RBP6.68□□□□□ -1.34
SMAD3-212ENST00000559937 FOXA2Q9Y261 457 aaPredicted RBP6.68□□□□□ -1.34
SMAD3-212ENST00000559937 TP53TG5Q9Y2B4 290 aa6.68□□□□□ -1.34
SMAD3-212ENST00000559937 LINC00312Q9Y6C7 94 aa6.68□□□□□ -1.34
SMAD3-212ENST00000559937 PRRC2CQ9Y520 2896 aaKnown RBP6.67□□□□□ -1.34
SMAD3-212ENST00000559937 FLNBO75369 2602 aaKnown RBP6.67□□□□□ -1.34
SMAD3-212ENST00000559937 CFAP46Q8IYW2 2715 aa6.67□□□□□ -1.34
SMAD3-212ENST00000559937 TRAV38-1A0A0B4J264 116 aa6.67□□□□□ -1.34
SMAD3-212ENST00000559937 A0A1W2PPE2 198 aa6.67□□□□□ -1.34
SMAD3-212ENST00000559937 ZFP92A6NM28 416 aa6.67□□□□□ -1.34
SMAD3-212ENST00000559937 C15orf61A6NNL5 157 aa6.67□□□□□ -1.34
SMAD3-212ENST00000559937 C17orf100A8MU93 164 aa6.67□□□□□ -1.34
SMAD3-212ENST00000559937 SEC14L6B5MCN3 397 aa6.67□□□□□ -1.34
SMAD3-212ENST00000559937 CYB5BO43169 146 aa6.67□□□□□ -1.34
SMAD3-212ENST00000559937 TGOLN2O43493 480 aa6.67□□□□□ -1.34
SMAD3-212ENST00000559937 HRASP01112 189 aa6.67□□□□□ -1.34
SMAD3-212ENST00000559937 IFNA17P01571 189 aa6.67□□□□□ -1.34
SMAD3-212ENST00000559937 PSMB3P49720 205 aa6.67□□□□□ -1.34
SMAD3-212ENST00000559937 ZNF134P52741 427 aa6.67□□□□□ -1.34
SMAD3-212ENST00000559937 ELLP55199 621 aaPredicted RBP6.67□□□□□ -1.34
SMAD3-212ENST00000559937 MRPS11P82912 194 aaKnown RBP6.67□□□□□ -1.34
SMAD3-212ENST00000559937 TBR1Q16650 682 aa6.67□□□□□ -1.34
SMAD3-212ENST00000559937 LTC4SQ16873 150 aa6.67□□□□□ -1.34
SMAD3-212ENST00000559937 RPL39P5Q59GN2 51 aa6.67□□□□□ -1.34
SMAD3-212ENST00000559937 CT45A1Q5HYN5 189 aa6.67□□□□□ -1.34
SMAD3-212ENST00000559937 FFAR4Q5NUL3 377 aa6.67□□□□□ -1.34
SMAD3-212ENST00000559937 ALKBH2Q6NS38 261 aa6.67□□□□□ -1.34
SMAD3-212ENST00000559937 GFRALQ6UXV0 394 aa6.67□□□□□ -1.34
SMAD3-212ENST00000559937 SLC25A48Q6ZT89 311 aaKnown RBP6.67□□□□□ -1.34
SMAD3-212ENST00000559937 SSX7Q7RTT5 188 aa6.67□□□□□ -1.34
SMAD3-212ENST00000559937 LINC00518Q8N0U6 118 aa6.67□□□□□ -1.34
SMAD3-212ENST00000559937 RPP25LQ8N5L8 163 aaKnown RBP6.67□□□□□ -1.34
SMAD3-212ENST00000559937 Q8NA96 180 aa6.67□□□□□ -1.34
SMAD3-212ENST00000559937 OR10G9Q8NGN4 311 aa6.67□□□□□ -1.34
SMAD3-212ENST00000559937 OR10G7Q8NGN6 311 aa6.67□□□□□ -1.34
SMAD3-212ENST00000559937 CT45A3Q8NHU0 189 aa6.67□□□□□ -1.34
SMAD3-212ENST00000559937 RAB1CQ92928 201 aa6.67□□□□□ -1.34
SMAD3-212ENST00000559937 C20orf24Q9BUV8 137 aa6.67□□□□□ -1.34
SMAD3-212ENST00000559937 NPCDR1Q9BY65 106 aa6.67□□□□□ -1.34
SMAD3-212ENST00000559937 CTDSP1Q9GZU7 261 aa6.67□□□□□ -1.34
SMAD3-212ENST00000559937 GAL3ST2Q9H3Q3 398 aa6.67□□□□□ -1.34
SMAD3-212ENST00000559937 TMEM242Q9NWH2 141 aa6.67□□□□□ -1.34
SMAD3-212ENST00000559937 RALYQ9UKM9 306 aaKnown RBP6.67□□□□□ -1.34
SMAD3-212ENST00000559937 TCF19Q9Y242 345 aa6.67□□□□□ -1.34
SMAD3-212ENST00000559937 ZNF257Q9Y2Q1 563 aa6.67□□□□□ -1.34
SMAD3-212ENST00000559937 YLPM1P49750 1951 aaKnown RBP6.66□□□□□ -1.34
SMAD3-212ENST00000559937 PIEZO2Q9H5I5 2752 aa6.66□□□□□ -1.34
SMAD3-212ENST00000559937 SMCO3A2RU48 225 aa6.66□□□□□ -1.34
SMAD3-212ENST00000559937 DPRXA6NFQ7 191 aa6.66□□□□□ -1.34
SMAD3-212ENST00000559937 PRSS46E5RG02 174 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms