RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 HMX3A6NHT5 357 aa9.64□□□□□ -0.87
SMAD3-208ENST00000558827 SCGNO76038 276 aa9.64□□□□□ -0.87
SMAD3-208ENST00000558827 TRBV12-3P01733 135 aa9.64□□□□□ -0.87
SMAD3-208ENST00000558827 UBE2KP61086 200 aa9.64□□□□□ -0.87
SMAD3-208ENST00000558827 NCS1P62166 190 aa9.64□□□□□ -0.87
SMAD3-208ENST00000558827 HOGA1Q86XE5 327 aa9.64□□□□□ -0.87
SMAD3-208ENST00000558827 MFSD4AQ8N468 514 aa9.64□□□□□ -0.87
SMAD3-208ENST00000558827 SAMD12Q8N8I0 201 aa9.64□□□□□ -0.87
SMAD3-208ENST00000558827 TEX45Q8NA69 505 aa9.64□□□□□ -0.87
SMAD3-208ENST00000558827 VCX3AQ9NNX9 186 aa9.64□□□□□ -0.87
SMAD3-208ENST00000558827 RAMP3O60896 148 aa9.63□□□□□ -0.87
SMAD3-208ENST00000558827 TNFAIP8O95379 198 aa9.63□□□□□ -0.87
SMAD3-208ENST00000558827 RPA2P15927 270 aa9.63□□□□□ -0.87
SMAD3-208ENST00000558827 SPNP16150 400 aa9.63□□□□□ -0.87
SMAD3-208ENST00000558827 BRWD1-AS2P59051 145 aa9.63□□□□□ -0.87
SMAD3-208ENST00000558827 VBP1P61758 197 aa9.63□□□□□ -0.87
SMAD3-208ENST00000558827 TIMM50Q3ZCQ8 353 aa9.63□□□□□ -0.87
SMAD3-208ENST00000558827 PYHIN1Q6K0P9 492 aa9.63□□□□□ -0.87
SMAD3-208ENST00000558827 OR13F1Q8NGS4 319 aa9.63□□□□□ -0.87
SMAD3-208ENST00000558827 SRSF12Q8WXF0 261 aaKnown RBP9.63□□□□□ -0.87
SMAD3-208ENST00000558827 SNAPC3Q92966 411 aa9.63□□□□□ -0.87
SMAD3-208ENST00000558827 FYTTD1Q96QD9 318 aaKnown RBP9.63□□□□□ -0.87
SMAD3-208ENST00000558827 RSRP1Q9BUV0 290 aa9.63□□□□□ -0.87
SMAD3-208ENST00000558827 SLC5A7Q9GZV3 580 aa9.63□□□□□ -0.87
SMAD3-208ENST00000558827 SLA2Q9H6Q3 261 aa9.63□□□□□ -0.87
SMAD3-208ENST00000558827 IFT46Q9NQC8 304 aa9.63□□□□□ -0.87
SMAD3-208ENST00000558827 COMMD3Q9UBI1 195 aa9.63□□□□□ -0.87
SMAD3-208ENST00000558827 ZNF256Q9Y2P7 627 aaPredicted RBP9.63□□□□□ -0.87
SMAD3-208ENST00000558827 MRPS7Q9Y2R9 242 aaKnown RBP9.63□□□□□ -0.87
SMAD3-208ENST00000558827 PRELID3BQ9Y3B1 194 aa9.63□□□□□ -0.87
SMAD3-208ENST00000558827 SULT1C2O00338 296 aa9.62□□□□□ -0.87
SMAD3-208ENST00000558827 ACTL6BO94805 426 aa9.62□□□□□ -0.87
SMAD3-208ENST00000558827 PMP2P02689 132 aa9.62□□□□□ -0.87
SMAD3-208ENST00000558827 EIF4EBP1Q13541 118 aaPredicted RBP9.62□□□□□ -0.87
SMAD3-208ENST00000558827 TMEM17Q86X19 198 aa9.62□□□□□ -0.87
SMAD3-208ENST00000558827 OSR1Q8TAX0 266 aaPredicted RBP9.62□□□□□ -0.87
SMAD3-208ENST00000558827 S100A16Q96FQ6 103 aaKnown RBP9.62□□□□□ -0.87
SMAD3-208ENST00000558827 B9D2Q9BPU9 175 aa9.62□□□□□ -0.87
SMAD3-208ENST00000558827 FUNDC2Q9BWH2 189 aa9.62□□□□□ -0.87
SMAD3-208ENST00000558827 TINAGL1Q9GZM7 467 aaPredicted RBP9.62□□□□□ -0.87
SMAD3-208ENST00000558827 NAA50Q9GZZ1 169 aaKnown RBP9.62□□□□□ -0.87
SMAD3-208ENST00000558827 LSM4Q9Y4Z0 139 aaKnown RBP9.62□□□□□ -0.87
SMAD3-208ENST00000558827 S4R3C0 116 aa9.62□□□□□ -0.87
SMAD3-208ENST00000558827 E7EUB6 86 aa9.61□□□□□ -0.87
SMAD3-208ENST00000558827 XRCC3O43542 346 aa9.61□□□□□ -0.87
SMAD3-208ENST00000558827 PPYP01298 95 aa9.61□□□□□ -0.87
SMAD3-208ENST00000558827 EIF4EP06730 217 aaKnown RBP9.61□□□□□ -0.87
SMAD3-208ENST00000558827 OR9G9P0C7N8 305 aa9.61□□□□□ -0.87
SMAD3-208ENST00000558827 RFX2P48378 723 aa9.61□□□□□ -0.87
SMAD3-208ENST00000558827 SCAND1P57086 179 aa9.61□□□□□ -0.87
SMAD3-208ENST00000558827 TAS2R20P59543 309 aa9.61□□□□□ -0.87
SMAD3-208ENST00000558827 DYRK1AQ13627 763 aa9.61□□□□□ -0.87
SMAD3-208ENST00000558827 CDK10Q15131 360 aa9.61□□□□□ -0.87
SMAD3-208ENST00000558827 RNASE12Q5GAN4 147 aaKnown RBP9.61□□□□□ -0.87
SMAD3-208ENST00000558827 UBE2NLQ5JXB2 153 aa9.61□□□□□ -0.87
SMAD3-208ENST00000558827 VAX1Q5SQQ9 334 aa9.61□□□□□ -0.87
SMAD3-208ENST00000558827 TMEM69Q5SWH9 247 aa9.61□□□□□ -0.87
SMAD3-208ENST00000558827 OVCH2Q7RTZ1 564 aa9.61□□□□□ -0.87
SMAD3-208ENST00000558827 ADAD2Q8NCV1 583 aaKnown RBP9.61□□□□□ -0.87
SMAD3-208ENST00000558827 OR4S2Q8NH73 311 aa9.61□□□□□ -0.87
SMAD3-208ENST00000558827 OR4C12Q96R67 309 aa9.61□□□□□ -0.87
SMAD3-208ENST00000558827 HSD17B10Q99714 261 aaKnown RBP9.61□□□□□ -0.87
SMAD3-208ENST00000558827 EHFQ9NZC4 300 aa9.61□□□□□ -0.87
SMAD3-208ENST00000558827 ZMAT5Q9UDW3 170 aaKnown RBP9.61□□□□□ -0.87
SMAD3-208ENST00000558827 A0A0A6YYH2 397 aa9.6□□□□□ -0.87
SMAD3-208ENST00000558827 TRAV3A0A0B4J244 114 aa9.6□□□□□ -0.87
SMAD3-208ENST00000558827 A6NJ64 397 aa9.6□□□□□ -0.87
SMAD3-208ENST00000558827 OR2J3O76001 311 aa9.6□□□□□ -0.87
SMAD3-208ENST00000558827 SLC22A5O76082 557 aa9.6□□□□□ -0.87
SMAD3-208ENST00000558827 OR2A4O95047 310 aa9.6□□□□□ -0.87
SMAD3-208ENST00000558827 IGHV3-23P01764 117 aa9.6□□□□□ -0.87
SMAD3-208ENST00000558827 SYNJ2BPP57105 145 aa9.6□□□□□ -0.87
SMAD3-208ENST00000558827 RHOGP84095 191 aa9.6□□□□□ -0.87
SMAD3-208ENST00000558827 ZNF45Q02386 682 aa9.6□□□□□ -0.87
SMAD3-208ENST00000558827 ACSM6Q6P461 480 aa9.6□□□□□ -0.87
SMAD3-208ENST00000558827 ZNF429Q86V71 674 aa9.6□□□□□ -0.87
SMAD3-208ENST00000558827 SNX29P2Q8IUI4 249 aa9.6□□□□□ -0.87
SMAD3-208ENST00000558827 MMD2Q8IY49 270 aa9.6□□□□□ -0.87
SMAD3-208ENST00000558827 SPAG16Q8N0X2 631 aa9.6□□□□□ -0.87
SMAD3-208ENST00000558827 OR5AP2Q8NGF4 316 aa9.6□□□□□ -0.87
SMAD3-208ENST00000558827 OR51H1Q8NH63 302 aa9.6□□□□□ -0.87
SMAD3-208ENST00000558827 OR2A7Q96R45 310 aa9.6□□□□□ -0.87
SMAD3-208ENST00000558827 RANGRFQ9HD47 186 aaPredicted RBP9.6□□□□□ -0.87
SMAD3-208ENST00000558827 AKIP1Q9NQ31 210 aa9.6□□□□□ -0.87
SMAD3-208ENST00000558827 SELENOKQ9Y6D0 94 aa9.6□□□□□ -0.87
SMAD3-208ENST00000558827 A0A0G2JLM5 398 aa9.59□□□□□ -0.87
SMAD3-208ENST00000558827 A0A1B0GW64 132 aa9.59□□□□□ -0.87
SMAD3-208ENST00000558827 TRIM64CA6NLI5 447 aa9.59□□□□□ -0.87
SMAD3-208ENST00000558827 H3BUA1 57 aa9.59□□□□□ -0.87
SMAD3-208ENST00000558827 HPGDSO60760 199 aa9.59□□□□□ -0.87
SMAD3-208ENST00000558827 REG1AP05451 166 aa9.59□□□□□ -0.87
SMAD3-208ENST00000558827 IL6RP08887 468 aaPredicted RBP9.59□□□□□ -0.87
SMAD3-208ENST00000558827 HLA-DMAP28067 261 aa9.59□□□□□ -0.87
SMAD3-208ENST00000558827 RPL27AP46776 148 aaKnown RBP9.59□□□□□ -0.87
SMAD3-208ENST00000558827 HERV-K104P61576 105 aa9.59□□□□□ -0.87
SMAD3-208ENST00000558827 ZNF66Q6ZN08 573 aa9.59□□□□□ -0.87
SMAD3-208ENST00000558827 ZNF818PQ6ZRF7 136 aa9.59□□□□□ -0.87
SMAD3-208ENST00000558827 CROCCP3Q8IVE0 287 aa9.59□□□□□ -0.87
SMAD3-208ENST00000558827 ZNF2Q9BSG1 426 aaPredicted RBP9.59□□□□□ -0.87
SMAD3-208ENST00000558827 HRASLSQ9HDD0 168 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms