RNA–Protein interactions for RNA: ENST00000556309.5

SUPT16H-206, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 3

Gene SUPT16H, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-206ENST00000556309 C1orf109Q9NX04 203 aa0.71□□□□□ -2.3
SUPT16H-206ENST00000556309 UBAP1Q9NZ09 502 aa0.71□□□□□ -2.3
SUPT16H-206ENST00000556309 KLK5Q9Y337 293 aaPredicted RBP0.71□□□□□ -2.3
SUPT16H-206ENST00000556309 ATP6V1DQ9Y5K8 247 aa0.71□□□□□ -2.3
SUPT16H-206ENST00000556309 ZCCHC6Q5VYS8 1495 aaKnown RBP0.71□□□□□ -2.3
SUPT16H-206ENST00000556309 GOLGA6L10A6NI86 522 aa0.7□□□□□ -2.3
SUPT16H-206ENST00000556309 GOLGA8RI6L899 631 aa0.7□□□□□ -2.3
SUPT16H-206ENST00000556309 YKT6O15498 198 aa0.7□□□□□ -2.3
SUPT16H-206ENST00000556309 CA5AP35218 305 aa0.7□□□□□ -2.3
SUPT16H-206ENST00000556309 CEBPGP53567 150 aa0.7□□□□□ -2.3
SUPT16H-206ENST00000556309 CLDN12P56749 244 aa0.7□□□□□ -2.3
SUPT16H-206ENST00000556309 MRPS15P82914 257 aaKnown RBP0.7□□□□□ -2.3
SUPT16H-206ENST00000556309 SLAMF1Q13291 335 aa0.7□□□□□ -2.3
SUPT16H-206ENST00000556309 ANGPT1Q15389 498 aa0.7□□□□□ -2.3
SUPT16H-206ENST00000556309 CLEC12BQ2HXU8 276 aa0.7□□□□□ -2.3
SUPT16H-206ENST00000556309 LYZL1Q6UWQ5 148 aa0.7□□□□□ -2.3
SUPT16H-206ENST00000556309 CRLF3Q8IUI8 442 aa0.7□□□□□ -2.3
SUPT16H-206ENST00000556309 FAM9CQ8IZT9 166 aa0.7□□□□□ -2.3
SUPT16H-206ENST00000556309 SYCE1Q8N0S2 351 aa0.7□□□□□ -2.3
SUPT16H-206ENST00000556309 C17orf78Q8N4C9 275 aa0.7□□□□□ -2.3
SUPT16H-206ENST00000556309 OR52E4Q8NGH9 312 aa0.7□□□□□ -2.3
SUPT16H-206ENST00000556309 OR10D3Q8NH80 312 aa0.7□□□□□ -2.3
SUPT16H-206ENST00000556309 OPTNQ96CV9 577 aa0.7□□□□□ -2.3
SUPT16H-206ENST00000556309 MS4A6EQ96DS6 147 aa0.7□□□□□ -2.3
SUPT16H-206ENST00000556309 ATP6V1G3Q96LB4 118 aa0.7□□□□□ -2.3
SUPT16H-206ENST00000556309 RBP7Q96R05 134 aa0.7□□□□□ -2.3
SUPT16H-206ENST00000556309 TMEM109Q9BVC6 243 aa0.7□□□□□ -2.3
SUPT16H-206ENST00000556309 NSRP1Q9H0G5 558 aaKnown RBP0.7□□□□□ -2.3
SUPT16H-206ENST00000556309 TMEM222Q9H0R3 208 aa0.7□□□□□ -2.3
SUPT16H-206ENST00000556309 HDHD2Q9H0R4 259 aa0.7□□□□□ -2.3
SUPT16H-206ENST00000556309 PARVGQ9HBI0 331 aa0.7□□□□□ -2.3
SUPT16H-206ENST00000556309 TREM1Q9NP99 234 aa0.7□□□□□ -2.3
SUPT16H-206ENST00000556309 NKIRAS1Q9NYS0 192 aa0.7□□□□□ -2.3
SUPT16H-206ENST00000556309 CD300AQ9UGN4 299 aa0.7□□□□□ -2.3
SUPT16H-206ENST00000556309 ATPIF1Q9UII2 106 aa0.7□□□□□ -2.3
SUPT16H-206ENST00000556309 NOSIPQ9Y314 301 aaKnown RBP0.7□□□□□ -2.3
SUPT16H-206ENST00000556309 PCYT1BQ9Y5K3 369 aaPredicted RBP0.7□□□□□ -2.3
SUPT16H-206ENST00000556309 GMEB1Q9Y692 573 aa0.7□□□□□ -2.3
SUPT16H-206ENST00000556309 TECTAO75443 2155 aa0.69□□□□□ -2.3
SUPT16H-206ENST00000556309 TMED7-TICAM2A0A0A6YYA0 188 aa0.69□□□□□ -2.3
SUPT16H-206ENST00000556309 IGHV1-18A0A0C4DH31 117 aa0.69□□□□□ -2.3
SUPT16H-206ENST00000556309 LINC00854A0A1B0GVQ3 168 aa0.69□□□□□ -2.3
SUPT16H-206ENST00000556309 OR6C6A6NF89 314 aa0.69□□□□□ -2.3
SUPT16H-206ENST00000556309 HSBP1L1C9JCN9 74 aa0.69□□□□□ -2.3
SUPT16H-206ENST00000556309 MKRN2OSH3BPM6 223 aa0.69□□□□□ -2.3
SUPT16H-206ENST00000556309 H3BT86 120 aa0.69□□□□□ -2.3
SUPT16H-206ENST00000556309 HLA-DQB2P05538 268 aa0.69□□□□□ -2.3
SUPT16H-206ENST00000556309 KRT7P08729 469 aa0.69□□□□□ -2.3
SUPT16H-206ENST00000556309 MIPP30301 263 aa0.69□□□□□ -2.3
SUPT16H-206ENST00000556309 S100A5P33763 92 aa0.69□□□□□ -2.3
SUPT16H-206ENST00000556309 TPI1P60174 286 aa0.69□□□□□ -2.3
SUPT16H-206ENST00000556309 MAGOHP61326 146 aaKnown RBP0.69□□□□□ -2.3
SUPT16H-206ENST00000556309 BASP1P80723 227 aaKnown RBP0.69□□□□□ -2.3
SUPT16H-206ENST00000556309 DR1Q01658 176 aa0.69□□□□□ -2.3
SUPT16H-206ENST00000556309 EMX1Q04741 257 aaPredicted RBP0.69□□□□□ -2.3
SUPT16H-206ENST00000556309 COTL1Q14019 142 aa0.69□□□□□ -2.3
SUPT16H-206ENST00000556309 SNCBQ16143 134 aa0.69□□□□□ -2.3
SUPT16H-206ENST00000556309 HLA-DRB5Q30154 266 aa0.69□□□□□ -2.3
SUPT16H-206ENST00000556309 STX12Q86Y82 276 aa0.69□□□□□ -2.3
SUPT16H-206ENST00000556309 DDI1Q8WTU0 396 aa0.69□□□□□ -2.3
SUPT16H-206ENST00000556309 SLC7A6Q92536 515 aa0.69□□□□□ -2.3
SUPT16H-206ENST00000556309 TMA16Q96EY4 203 aaKnown RBP0.69□□□□□ -2.3
SUPT16H-206ENST00000556309 CHMP6Q96FZ7 201 aa0.69□□□□□ -2.3
SUPT16H-206ENST00000556309 C8orf76Q96K31 380 aa0.69□□□□□ -2.3
SUPT16H-206ENST00000556309 CEP19Q96LK0 163 aa0.69□□□□□ -2.3
SUPT16H-206ENST00000556309 SELENOSQ9BQE4 189 aa0.69□□□□□ -2.3
SUPT16H-206ENST00000556309 ADAT1Q9BUB4 502 aaKnown RBP0.69□□□□□ -2.3
SUPT16H-206ENST00000556309 PSTPIP2Q9H939 334 aa0.69□□□□□ -2.3
SUPT16H-206ENST00000556309 TIMM9Q9Y5J7 89 aa0.69□□□□□ -2.3
SUPT16H-206ENST00000556309 UNC13AQ9UPW8 1703 aa0.69□□□□□ -2.3
SUPT16H-206ENST00000556309 HEATR5AQ86XA9 2040 aa0.69□□□□□ -2.3
SUPT16H-206ENST00000556309 ROCK1Q13464 1354 aa0.69□□□□□ -2.3
SUPT16H-206ENST00000556309 A0A0A6YYH2 397 aa0.68□□□□□ -2.3
SUPT16H-206ENST00000556309 TRAV38-1A0A0B4J264 116 aa0.68□□□□□ -2.3
SUPT16H-206ENST00000556309 A6NJ64 397 aa0.68□□□□□ -2.3
SUPT16H-206ENST00000556309 H3BQV1 296 aa0.68□□□□□ -2.3
SUPT16H-206ENST00000556309 K7ERQ8 282 aa0.68□□□□□ -2.3
SUPT16H-206ENST00000556309 HMGB3O15347 200 aaKnown RBP0.68□□□□□ -2.3
SUPT16H-206ENST00000556309 ORC5O43913 435 aa0.68□□□□□ -2.3
SUPT16H-206ENST00000556309 AHSA1O95433 338 aa0.68□□□□□ -2.3
SUPT16H-206ENST00000556309 PPBPP02775 128 aa0.68□□□□□ -2.3
SUPT16H-206ENST00000556309 SERPINA7P05543 415 aa0.68□□□□□ -2.3
SUPT16H-206ENST00000556309 LGALS1P09382 135 aaKnown RBP0.68□□□□□ -2.3
SUPT16H-206ENST00000556309 OCMP0CE72 109 aaPredicted RBP0.68□□□□□ -2.3
SUPT16H-206ENST00000556309 MAGEA2P43356 314 aa0.68□□□□□ -2.3
SUPT16H-206ENST00000556309 HADHBP55084 474 aaKnown RBP0.68□□□□□ -2.3
SUPT16H-206ENST00000556309 FXYD7P58549 80 aa0.68□□□□□ -2.3
SUPT16H-206ENST00000556309 ARPC4P59998 168 aa0.68□□□□□ -2.3
SUPT16H-206ENST00000556309 SNAP25P60880 206 aa0.68□□□□□ -2.3
SUPT16H-206ENST00000556309 RAB4BP61018 213 aa0.68□□□□□ -2.3
SUPT16H-206ENST00000556309 RAB14P61106 215 aa0.68□□□□□ -2.3
SUPT16H-206ENST00000556309 UBE2IP63279 158 aaKnown RBP0.68□□□□□ -2.3
SUPT16H-206ENST00000556309 MRPS25P82663 173 aaKnown RBP0.68□□□□□ -2.3
SUPT16H-206ENST00000556309 FABP5Q01469 135 aa0.68□□□□□ -2.3
SUPT16H-206ENST00000556309 PLCXD2Q0VAA5 305 aa0.68□□□□□ -2.3
SUPT16H-206ENST00000556309 PMS2P3Q13401 168 aa0.68□□□□□ -2.3
SUPT16H-206ENST00000556309 TMED2Q15363 201 aa0.68□□□□□ -2.3
SUPT16H-206ENST00000556309 MIAQ16674 131 aa0.68□□□□□ -2.3
SUPT16H-206ENST00000556309 RGS21Q2M5E4 152 aa0.68□□□□□ -2.3
SUPT16H-206ENST00000556309 AKIRIN2Q53H80 203 aa0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms