RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 ZNF90Q03938 601 aa14.25□□□□□ -0.13
PPP4R3A-208ENST00000555462 PDLIM3Q53GG5 364 aaPredicted RBP14.25□□□□□ -0.13
PPP4R3A-208ENST00000555462 TMEM170AQ8WVE7 144 aa14.25□□□□□ -0.13
PPP4R3A-208ENST00000555462 LSM10Q969L4 123 aaKnown RBP14.25□□□□□ -0.13
PPP4R3A-208ENST00000555462 P2RX4Q99571 388 aa14.25□□□□□ -0.13
PPP4R3A-208ENST00000555462 PCED1AQ9H1Q7 454 aa14.25□□□□□ -0.13
PPP4R3A-208ENST00000555462 MARCH11A6NNE9 402 aa14.24□□□□□ -0.13
PPP4R3A-208ENST00000555462 SSTP61278 116 aa14.24□□□□□ -0.13
PPP4R3A-208ENST00000555462 PRAMEF5Q5TYX0 476 aa14.24□□□□□ -0.13
PPP4R3A-208ENST00000555462 PMS2CLQ68D20 193 aa14.24□□□□□ -0.13
PPP4R3A-208ENST00000555462 OCC1Q8TAD7 63 aa14.24□□□□□ -0.13
PPP4R3A-208ENST00000555462 HSPB9Q9BQS6 159 aa14.24□□□□□ -0.13
PPP4R3A-208ENST00000555462 RTL8AQ9BWD3 113 aa14.24□□□□□ -0.13
PPP4R3A-208ENST00000555462 ZNRD1Q9P1U0 126 aa14.24□□□□□ -0.13
PPP4R3A-208ENST00000555462 KITLGP21583 273 aa14.24□□□□□ -0.13
PPP4R3A-208ENST00000555462 KRTDAPP60985 99 aa14.24□□□□□ -0.13
PPP4R3A-208ENST00000555462 RNFT1Q5M7Z0 435 aa14.24□□□□□ -0.13
PPP4R3A-208ENST00000555462 RIMS4Q9H426 269 aaPredicted RBP14.24□□□□□ -0.13
PPP4R3A-208ENST00000555462 MSMO1Q15800 293 aa14.24□□□□□ -0.13
PPP4R3A-208ENST00000555462 Q6ZVH6 145 aa14.24□□□□□ -0.13
PPP4R3A-208ENST00000555462 BAGE3Q86Y29 109 aa14.24□□□□□ -0.13
PPP4R3A-208ENST00000555462 BAGE2Q86Y30 109 aa14.24□□□□□ -0.13
PPP4R3A-208ENST00000555462 SAMD10Q9BYL1 202 aa14.24□□□□□ -0.13
PPP4R3A-208ENST00000555462 TMEM242Q9NWH2 141 aa14.24□□□□□ -0.13
PPP4R3A-208ENST00000555462 FAM90A10PA6NDY2 464 aa14.23□□□□□ -0.13
PPP4R3A-208ENST00000555462 FAM90A18PA6NE21 464 aa14.23□□□□□ -0.13
PPP4R3A-208ENST00000555462 FAM90A16PA6NEW6 464 aa14.23□□□□□ -0.13
PPP4R3A-208ENST00000555462 FAM90A20PA6NIJ5 464 aa14.23□□□□□ -0.13
PPP4R3A-208ENST00000555462 FAM90A8PA6NJQ4 464 aa14.23□□□□□ -0.13
PPP4R3A-208ENST00000555462 FAM90A7PA6NKC0 464 aa14.23□□□□□ -0.13
PPP4R3A-208ENST00000555462 FAM90A22PA8MWA6 464 aa14.23□□□□□ -0.13
PPP4R3A-208ENST00000555462 FAM90A12PA8MX19 464 aa14.23□□□□□ -0.13
PPP4R3A-208ENST00000555462 FAM90A5PA8MXJ8 464 aa14.23□□□□□ -0.13
PPP4R3A-208ENST00000555462 FAM90A23PA8MXZ1 464 aa14.23□□□□□ -0.13
PPP4R3A-208ENST00000555462 F6UZH7 168 aa14.23□□□□□ -0.13
PPP4R3A-208ENST00000555462 M0R1X1 148 aa14.23□□□□□ -0.13
PPP4R3A-208ENST00000555462 FAM90A15PP0C7V4 464 aa14.23□□□□□ -0.13
PPP4R3A-208ENST00000555462 FAM90A13PP0C7W8 464 aa14.23□□□□□ -0.13
PPP4R3A-208ENST00000555462 FAM90A14PP0C7W9 464 aa14.23□□□□□ -0.13
PPP4R3A-208ENST00000555462 FAM90A24PP0C7X0 464 aa14.23□□□□□ -0.13
PPP4R3A-208ENST00000555462 DEFB108BQ8NET1 73 aa14.23□□□□□ -0.13
PPP4R3A-208ENST00000555462 Q8NFD4 153 aa14.23□□□□□ -0.13
PPP4R3A-208ENST00000555462 SGK494Q96LW2 274 aa14.23□□□□□ -0.13
PPP4R3A-208ENST00000555462 SEPSECSQ9HD40 501 aaKnown RBP14.23□□□□□ -0.13
PPP4R3A-208ENST00000555462 PARD6AQ9NPB6 346 aa14.23□□□□□ -0.13
PPP4R3A-208ENST00000555462 MAP1AP78559 2803 aaPredicted RBP14.23□□□□□ -0.13
PPP4R3A-208ENST00000555462 ZFHX2Q9C0A1 2572 aaPredicted RBP14.23□□□□□ -0.13
PPP4R3A-208ENST00000555462 CA1P00915 261 aaPredicted RBP14.23□□□□□ -0.13
PPP4R3A-208ENST00000555462 IGHEP01854 428 aa14.23□□□□□ -0.13
PPP4R3A-208ENST00000555462 CD1BP29016 333 aa14.23□□□□□ -0.13
PPP4R3A-208ENST00000555462 MEOX1P50221 254 aa14.23□□□□□ -0.13
PPP4R3A-208ENST00000555462 UBE2NP61088 152 aaKnown RBP14.23□□□□□ -0.13
PPP4R3A-208ENST00000555462 KCNIP4Q6PIL6 250 aa14.23□□□□□ -0.13
PPP4R3A-208ENST00000555462 Q6ZS49 121 aa14.23□□□□□ -0.13
PPP4R3A-208ENST00000555462 OR5R1Q8NH85 324 aa14.23□□□□□ -0.13
PPP4R3A-208ENST00000555462 NAGKQ9UJ70 344 aa14.23□□□□□ -0.13
PPP4R3A-208ENST00000555462 MDFIC2A0A1B0GVS7 189 aa14.22□□□□□ -0.13
PPP4R3A-208ENST00000555462 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.22□□□□□ -0.13
PPP4R3A-208ENST00000555462 OR10J4P0C629 311 aa14.22□□□□□ -0.13
PPP4R3A-208ENST00000555462 ARR3P36575 388 aa14.22□□□□□ -0.13
PPP4R3A-208ENST00000555462 MLANAQ16655 118 aa14.22□□□□□ -0.13
PPP4R3A-208ENST00000555462 ACTL10Q5JWF8 245 aa14.22□□□□□ -0.13
PPP4R3A-208ENST00000555462 DOLPP1Q86YN1 238 aa14.22□□□□□ -0.13
PPP4R3A-208ENST00000555462 COQ2Q96H96 371 aa14.22□□□□□ -0.13
PPP4R3A-208ENST00000555462 MRPL37Q9BZE1 423 aaKnown RBP14.22□□□□□ -0.13
PPP4R3A-208ENST00000555462 LRBAP50851 2863 aa14.22□□□□□ -0.13
PPP4R3A-208ENST00000555462 TET2Q6N021 2002 aaPredicted RBP14.22□□□□□ -0.13
PPP4R3A-208ENST00000555462 OR5B21A6NL26 309 aa14.22□□□□□ -0.13
PPP4R3A-208ENST00000555462 ZNRF1Q8ND25 227 aa14.22□□□□□ -0.13
PPP4R3A-208ENST00000555462 R3HDM4Q96D70 268 aa14.22□□□□□ -0.13
PPP4R3A-208ENST00000555462 FAM173AQ9BQD7 235 aa14.22□□□□□ -0.13
PPP4R3A-208ENST00000555462 RYDENQ9NUL5 291 aaKnown RBP14.22□□□□□ -0.13
PPP4R3A-208ENST00000555462 B4GALT7Q9UBV7 327 aa14.22□□□□□ -0.13
PPP4R3A-208ENST00000555462 HSPB7Q9UBY9 170 aa14.22□□□□□ -0.13
PPP4R3A-208ENST00000555462 RNF114Q9Y508 228 aa14.22□□□□□ -0.13
PPP4R3A-208ENST00000555462 MPC1Q9Y5U8 109 aa14.22□□□□□ -0.13
PPP4R3A-208ENST00000555462 SPTAN1Q13813 2472 aaKnown RBP14.22□□□□□ -0.13
PPP4R3A-208ENST00000555462 PCSK5Q92824 1860 aa14.22□□□□□ -0.13
PPP4R3A-208ENST00000555462 DNPH1O43598 174 aa14.22□□□□□ -0.13
PPP4R3A-208ENST00000555462 SERF1AO75920 110 aa14.22□□□□□ -0.13
PPP4R3A-208ENST00000555462 PMCHP20382 165 aa14.22□□□□□ -0.13
PPP4R3A-208ENST00000555462 NUTF2P61970 127 aaKnown RBP14.22□□□□□ -0.13
PPP4R3A-208ENST00000555462 ERASQ7Z444 233 aa14.22□□□□□ -0.13
PPP4R3A-208ENST00000555462 GBGT1Q8N5D6 347 aa14.22□□□□□ -0.13
PPP4R3A-208ENST00000555462 MS4A5Q9H3V2 200 aa14.22□□□□□ -0.13
PPP4R3A-208ENST00000555462 SERTAD4Q9NUC0 356 aa14.22□□□□□ -0.13
PPP4R3A-208ENST00000555462 NPSP0C0P6 89 aa14.21□□□□□ -0.13
PPP4R3A-208ENST00000555462 FOSL1P15407 271 aa14.21□□□□□ -0.13
PPP4R3A-208ENST00000555462 IQCJQ1A5X6 159 aa14.21□□□□□ -0.13
PPP4R3A-208ENST00000555462 FAM216AQ8WUB2 273 aa14.21□□□□□ -0.13
PPP4R3A-208ENST00000555462 C15orf62A8K5M9 175 aa14.21□□□□□ -0.13
PPP4R3A-208ENST00000555462 AHRRA9YTQ3 701 aa14.21□□□□□ -0.13
PPP4R3A-208ENST00000555462 IRF2P14316 349 aa14.21□□□□□ -0.13
PPP4R3A-208ENST00000555462 SAXO1Q8IYX7 474 aa14.21□□□□□ -0.13
PPP4R3A-208ENST00000555462 ZNF645Q8N7E2 425 aa14.21□□□□□ -0.13
PPP4R3A-208ENST00000555462 CMTM2Q8TAZ6 248 aa14.21□□□□□ -0.13
PPP4R3A-208ENST00000555462 YTHDF2Q9Y5A9 579 aaKnown RBP14.21□□□□□ -0.13
PPP4R3A-208ENST00000555462 FCN1O00602 326 aa14.2□□□□□ -0.14
PPP4R3A-208ENST00000555462 TBC1D28Q2M2D7 210 aa14.2□□□□□ -0.14
PPP4R3A-208ENST00000555462 MRPL54Q6P161 138 aaKnown RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms