RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 SNAPC3Q92966 411 aa7.19□□□□□ -1.26
YBX3-218ENST00000546298 RSRP1Q9BUV0 290 aa7.19□□□□□ -1.26
YBX3-218ENST00000546298 OR51E2Q9H255 320 aa7.19□□□□□ -1.26
YBX3-218ENST00000546298 DIABLOQ9NR28 239 aa7.19□□□□□ -1.26
YBX3-218ENST00000546298 ELF5Q9UKW6 265 aaPredicted RBP7.19□□□□□ -1.26
YBX3-218ENST00000546298 TRAV18A0A075B6X5 111 aa7.18□□□□□ -1.26
YBX3-218ENST00000546298 LOC100506127A0A0U1RQW1 187 aa7.18□□□□□ -1.26
YBX3-218ENST00000546298 FAM223BA6NKX1 122 aa7.18□□□□□ -1.26
YBX3-218ENST00000546298 IGLV1-51P01701 117 aa7.18□□□□□ -1.26
YBX3-218ENST00000546298 SAA1P0DJI8 122 aaPredicted RBP7.18□□□□□ -1.26
YBX3-218ENST00000546298 MAS1LP35410 378 aa7.18□□□□□ -1.26
YBX3-218ENST00000546298 KIR2DS2P43631 304 aa7.18□□□□□ -1.26
YBX3-218ENST00000546298 ARPC4P59998 168 aa7.18□□□□□ -1.26
YBX3-218ENST00000546298 MXD1Q05195 221 aa7.18□□□□□ -1.26
YBX3-218ENST00000546298 ATP5G2Q06055 141 aa7.18□□□□□ -1.26
YBX3-218ENST00000546298 RPEL1Q2QD12 228 aa7.18□□□□□ -1.26
YBX3-218ENST00000546298 TIMM50Q3ZCQ8 353 aa7.18□□□□□ -1.26
YBX3-218ENST00000546298 IDNKQ5T6J7 187 aa7.18□□□□□ -1.26
YBX3-218ENST00000546298 ZNF66Q6ZN08 573 aa7.18□□□□□ -1.26
YBX3-218ENST00000546298 OVCH2Q7RTZ1 564 aa7.18□□□□□ -1.26
YBX3-218ENST00000546298 CROCCP3Q8IVE0 287 aa7.18□□□□□ -1.26
YBX3-218ENST00000546298 FAM223AQ8IWN6 122 aa7.18□□□□□ -1.26
YBX3-218ENST00000546298 SGPP2Q8IWX5 399 aa7.18□□□□□ -1.26
YBX3-218ENST00000546298 ZBTB34Q8NCN2 500 aa7.18□□□□□ -1.26
YBX3-218ENST00000546298 ADAD2Q8NCV1 583 aaKnown RBP7.18□□□□□ -1.26
YBX3-218ENST00000546298 BEST4Q8NFU0 473 aa7.18□□□□□ -1.26
YBX3-218ENST00000546298 OR9G4Q8NGQ1 327 aa7.18□□□□□ -1.26
YBX3-218ENST00000546298 TCTEX1D2Q8WW35 142 aa7.18□□□□□ -1.26
YBX3-218ENST00000546298 AIFM2Q9BRQ8 373 aa7.18□□□□□ -1.26
YBX3-218ENST00000546298 ZNF430Q9H8G1 570 aaPredicted RBP7.18□□□□□ -1.26
YBX3-218ENST00000546298 C3orf84H3BNL1 204 aa7.17□□□□□ -1.26
YBX3-218ENST00000546298 AIREO43918 545 aa7.17□□□□□ -1.26
YBX3-218ENST00000546298 SSX5O60225 188 aa7.17□□□□□ -1.26
YBX3-218ENST00000546298 OR2A4O95047 310 aa7.17□□□□□ -1.26
YBX3-218ENST00000546298 HRASP01112 189 aa7.17□□□□□ -1.26
YBX3-218ENST00000546298 CLEC2LP0C7M8 214 aa7.17□□□□□ -1.26
YBX3-218ENST00000546298 FRMD6-AS1P0C7T7 363 aa7.17□□□□□ -1.26
YBX3-218ENST00000546298 APELAP0DMC3 54 aa7.17□□□□□ -1.26
YBX3-218ENST00000546298 CBX5P45973 191 aa7.17□□□□□ -1.26
YBX3-218ENST00000546298 SYNJ2BPP57105 145 aa7.17□□□□□ -1.26
YBX3-218ENST00000546298 RHOGP84095 191 aa7.17□□□□□ -1.26
YBX3-218ENST00000546298 DYRK1AQ13627 763 aa7.17□□□□□ -1.26
YBX3-218ENST00000546298 MSMO1Q15800 293 aa7.17□□□□□ -1.26
YBX3-218ENST00000546298 NEDD8Q15843 81 aa7.17□□□□□ -1.26
YBX3-218ENST00000546298 MRGPRG-AS1Q2M3A8 158 aa7.17□□□□□ -1.26
YBX3-218ENST00000546298 KCTD21Q4G0X4 260 aa7.17□□□□□ -1.26
YBX3-218ENST00000546298 IDO2Q6ZQW0 420 aa7.17□□□□□ -1.26
YBX3-218ENST00000546298 HOGA1Q86XE5 327 aa7.17□□□□□ -1.26
YBX3-218ENST00000546298 SBSPONQ8IVN8 264 aa7.17□□□□□ -1.26
YBX3-218ENST00000546298 MFSD4AQ8N468 514 aa7.17□□□□□ -1.26
YBX3-218ENST00000546298 TTC9CQ8N5M4 171 aa7.17□□□□□ -1.26
YBX3-218ENST00000546298 NECAP1Q8NC96 275 aa7.17□□□□□ -1.26
YBX3-218ENST00000546298 OR2A7Q96R45 310 aa7.17□□□□□ -1.26
YBX3-218ENST00000546298 ZMAT4Q9H898 229 aa7.17□□□□□ -1.26
YBX3-218ENST00000546298 VCX3AQ9NNX9 186 aa7.17□□□□□ -1.26
YBX3-218ENST00000546298 PEMTQ9UBM1 199 aa7.17□□□□□ -1.26
YBX3-218ENST00000546298 SPATA2Q9UM82 520 aa7.17□□□□□ -1.26
YBX3-218ENST00000546298 PRKDCP78527 4128 aaKnown RBP7.17□□□□□ -1.26
YBX3-218ENST00000546298 TRBV9A0A0B4J1U6 114 aa7.16□□□□□ -1.26
YBX3-218ENST00000546298 IGKV1D-13A0A0B4J2D9 117 aa7.16□□□□□ -1.26
YBX3-218ENST00000546298 DPPA5A6NC42 116 aa7.16□□□□□ -1.26
YBX3-218ENST00000546298 TRIM64CA6NLI5 447 aa7.16□□□□□ -1.26
YBX3-218ENST00000546298 A8MZ25 164 aa7.16□□□□□ -1.26
YBX3-218ENST00000546298 DHFRP00374 187 aa7.16□□□□□ -1.26
YBX3-218ENST00000546298 IGKV1-13P0DP09 117 aa7.16□□□□□ -1.26
YBX3-218ENST00000546298 FCGR2CP31995 323 aa7.16□□□□□ -1.26
YBX3-218ENST00000546298 RPL30P62888 115 aaKnown RBP7.16□□□□□ -1.26
YBX3-218ENST00000546298 CATR1Q13166 79 aa7.16□□□□□ -1.26
YBX3-218ENST00000546298 OR2B11Q5JQS5 317 aa7.16□□□□□ -1.26
YBX3-218ENST00000546298 LCN12Q6JVE5 192 aa7.16□□□□□ -1.26
YBX3-218ENST00000546298 OR5H6Q8NGV6 325 aa7.16□□□□□ -1.26
YBX3-218ENST00000546298 TMEM167AQ8TBQ9 72 aa7.16□□□□□ -1.26
YBX3-218ENST00000546298 BORCS5Q969J3 196 aa7.16□□□□□ -1.26
YBX3-218ENST00000546298 KCTD12Q96CX2 325 aaKnown RBP7.16□□□□□ -1.26
YBX3-218ENST00000546298 RCHY1Q96PM5 261 aa7.16□□□□□ -1.26
YBX3-218ENST00000546298 AUNIPQ9H7T9 357 aa7.16□□□□□ -1.26
YBX3-218ENST00000546298 AKIP1Q9NQ31 210 aa7.16□□□□□ -1.26
YBX3-218ENST00000546298 TAS2R8Q9NYW2 309 aa7.16□□□□□ -1.26
YBX3-218ENST00000546298 SIGLEC8Q9NYZ4 499 aa7.16□□□□□ -1.26
YBX3-218ENST00000546298 ZNF257Q9Y2Q1 563 aa7.16□□□□□ -1.26
YBX3-218ENST00000546298 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.15□□□□□ -1.26
YBX3-218ENST00000546298 RBFOX2O43251 390 aaKnown RBP eCLIP7.15□□□□□ -1.26
YBX3-218ENST00000546298 KBTBD11O94819 623 aa7.15□□□□□ -1.26
YBX3-218ENST00000546298 PPYP01298 95 aa7.15□□□□□ -1.26
YBX3-218ENST00000546298 IGLV2-14P01704 120 aa7.15□□□□□ -1.26
YBX3-218ENST00000546298 RPL27AP46776 148 aaKnown RBP7.15□□□□□ -1.26
YBX3-218ENST00000546298 DEFA5Q01523 94 aa7.15□□□□□ -1.26
YBX3-218ENST00000546298 EIF4EBP1Q13541 118 aaPredicted RBP7.15□□□□□ -1.26
YBX3-218ENST00000546298 EXOSC2Q13868 293 aaKnown RBP7.15□□□□□ -1.26
YBX3-218ENST00000546298 IL34Q6ZMJ4 242 aa7.15□□□□□ -1.26
YBX3-218ENST00000546298 GTSCR1Q86UQ5 136 aa7.15□□□□□ -1.26
YBX3-218ENST00000546298 HAPLN4Q86UW8 402 aa7.15□□□□□ -1.26
YBX3-218ENST00000546298 VKORC1L1Q8N0U8 176 aa7.15□□□□□ -1.26
YBX3-218ENST00000546298 PUSL1Q8N0Z8 303 aaKnown RBP7.15□□□□□ -1.26
YBX3-218ENST00000546298 Q8N402 240 aa7.15□□□□□ -1.26
YBX3-218ENST00000546298 OR13F1Q8NGS4 319 aa7.15□□□□□ -1.26
YBX3-218ENST00000546298 OR2K2Q8NGT1 345 aa7.15□□□□□ -1.26
YBX3-218ENST00000546298 OR4A5Q8NH83 315 aa7.15□□□□□ -1.26
YBX3-218ENST00000546298 SECTM1Q8WVN6 248 aa7.15□□□□□ -1.26
YBX3-218ENST00000546298 GIMAP1Q8WWP7 306 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms