RNA–Protein interactions for RNA: ENST00000543982.5

XRCC1-202, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2 BASIC

Gene XRCC1, Length 1,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-202ENST00000543982 RNF222A6NCQ9 220 aa12.87□□□□□ -0.35
XRCC1-202ENST00000543982 H0YJW9 148 aa12.87□□□□□ -0.35
XRCC1-202ENST00000543982 DEDDO75618 318 aa12.87□□□□□ -0.35
XRCC1-202ENST00000543982 IGKV1-5P01602 117 aa12.87□□□□□ -0.35
XRCC1-202ENST00000543982 UBE2E1P51965 193 aa12.87□□□□□ -0.35
XRCC1-202ENST00000543982 SMCO1Q147U7 214 aa12.87□□□□□ -0.35
XRCC1-202ENST00000543982 KCNRGQ8N5I3 272 aa12.87□□□□□ -0.35
XRCC1-202ENST00000543982 LSM10Q969L4 123 aaKnown RBP12.87□□□□□ -0.35
XRCC1-202ENST00000543982 CYSRT1A8MQ03 144 aa12.87□□□□□ -0.35
XRCC1-202ENST00000543982 SCGB1D2O95969 90 aa12.87□□□□□ -0.35
XRCC1-202ENST00000543982 SLC25A6P12236 298 aa12.87□□□□□ -0.35
XRCC1-202ENST00000543982 HTR1DP28221 377 aa12.87□□□□□ -0.35
XRCC1-202ENST00000543982 KRTAP1-1Q07627 177 aa12.87□□□□□ -0.35
XRCC1-202ENST00000543982 TPTE2P1Q5T6R2 138 aa12.87□□□□□ -0.35
XRCC1-202ENST00000543982 THOC7Q6I9Y2 204 aaKnown RBP12.87□□□□□ -0.35
XRCC1-202ENST00000543982 BRD3OSQ6XYD6 125 aa12.87□□□□□ -0.35
XRCC1-202ENST00000543982 Q6ZRM9 215 aa12.87□□□□□ -0.35
XRCC1-202ENST00000543982 FOXRED2Q8IWF2 684 aa12.87□□□□□ -0.35
XRCC1-202ENST00000543982 VKORC1L1Q8N0U8 176 aa12.87□□□□□ -0.35
XRCC1-202ENST00000543982 OR1S1Q8NH92 325 aa12.87□□□□□ -0.35
XRCC1-202ENST00000543982 CD300LFQ8TDQ1 290 aa12.87□□□□□ -0.35
XRCC1-202ENST00000543982 DPM3Q9P2X0 92 aa12.87□□□□□ -0.35
XRCC1-202ENST00000543982 A0A1B0GU03 582 aa12.86□□□□□ -0.35
XRCC1-202ENST00000543982 A0A1W2PPI3 338 aa12.86□□□□□ -0.35
XRCC1-202ENST00000543982 SRRM4A7MD48 611 aaKnown RBP12.86□□□□□ -0.35
XRCC1-202ENST00000543982 ST8SIA3O43173 380 aa12.86□□□□□ -0.35
XRCC1-202ENST00000543982 TGIF2LXQ8IUE1 241 aa12.86□□□□□ -0.35
XRCC1-202ENST00000543982 OR5AN1Q8NGI8 311 aa12.86□□□□□ -0.35
XRCC1-202ENST00000543982 RRNAD1Q96FB5 475 aaKnown RBP12.86□□□□□ -0.35
XRCC1-202ENST00000543982 LSM5Q9Y4Y9 91 aaKnown RBP12.86□□□□□ -0.35
XRCC1-202ENST00000543982 TRAV40A0A0B4J280 105 aa12.85□□□□□ -0.35
XRCC1-202ENST00000543982 IGHV1-3A0A0C4DH29 117 aa12.85□□□□□ -0.35
XRCC1-202ENST00000543982 K7EPK0 472 aa12.85□□□□□ -0.35
XRCC1-202ENST00000543982 CD24P25063 80 aa12.85□□□□□ -0.35
XRCC1-202ENST00000543982 SAA4P35542 130 aa12.85□□□□□ -0.35
XRCC1-202ENST00000543982 G6PCP35575 357 aa12.85□□□□□ -0.35
XRCC1-202ENST00000543982 THBS3P49746 956 aa12.85□□□□□ -0.35
XRCC1-202ENST00000543982 AKR1C2P52895 323 aa12.85□□□□□ -0.35
XRCC1-202ENST00000543982 SSX2Q16385 188 aa12.85□□□□□ -0.35
XRCC1-202ENST00000543982 TEX261Q6UWH6 196 aa12.85□□□□□ -0.35
XRCC1-202ENST00000543982 FAM71E2Q8N5Q1 922 aa12.85□□□□□ -0.35
XRCC1-202ENST00000543982 OR8H1Q8NGG4 311 aa12.85□□□□□ -0.35
XRCC1-202ENST00000543982 RNASE11Q8TAA1 199 aaKnown RBP12.85□□□□□ -0.35
XRCC1-202ENST00000543982 GPR146Q96CH1 333 aa12.85□□□□□ -0.35
XRCC1-202ENST00000543982 U3KQ87 197 aa12.85□□□□□ -0.35
XRCC1-202ENST00000543982 KCNAB3O43448 404 aa12.85□□□□□ -0.35
XRCC1-202ENST00000543982 CRYZL1O95825 349 aa12.85□□□□□ -0.35
XRCC1-202ENST00000543982 KRASP01116 189 aa12.85□□□□□ -0.35
XRCC1-202ENST00000543982 NUP62P37198 522 aaPredicted RBP12.85□□□□□ -0.35
XRCC1-202ENST00000543982 NKX2-1P43699 371 aaPredicted RBP12.85□□□□□ -0.35
XRCC1-202ENST00000543982 POMT1Q9Y6A1 747 aa12.85□□□□□ -0.35
XRCC1-202ENST00000543982 TLN2Q9Y4G6 2542 aa12.84□□□□□ -0.35
XRCC1-202ENST00000543982 IGHV1-69DA0A0B4J2H0 117 aa12.84□□□□□ -0.35
XRCC1-202ENST00000543982 LEUTXA8MZ59 168 aa12.84□□□□□ -0.35
XRCC1-202ENST00000543982 NPFFO15130 113 aa12.84□□□□□ -0.35
XRCC1-202ENST00000543982 ATG12O94817 140 aa12.84□□□□□ -0.35
XRCC1-202ENST00000543982 IGHV1-69P01742 117 aa12.84□□□□□ -0.35
XRCC1-202ENST00000543982 P0C879 139 aa12.84□□□□□ -0.35
XRCC1-202ENST00000543982 ZNF767PQ75MW2 155 aa12.84□□□□□ -0.35
XRCC1-202ENST00000543982 MOB3BQ86TA1 216 aa12.84□□□□□ -0.35
XRCC1-202ENST00000543982 RPEQ96AT9 228 aa12.84□□□□□ -0.35
XRCC1-202ENST00000543982 AQP10Q96PS8 301 aa12.84□□□□□ -0.35
XRCC1-202ENST00000543982 SLC35D1Q9NTN3 355 aa12.84□□□□□ -0.35
XRCC1-202ENST00000543982 PRELID3BQ9Y3B1 194 aa12.84□□□□□ -0.35
XRCC1-202ENST00000543982 E5RGE8 158 aa12.83□□□□□ -0.35
XRCC1-202ENST00000543982 TIMM23O14925 209 aa12.83□□□□□ -0.35
XRCC1-202ENST00000543982 PITX3O75364 302 aa12.83□□□□□ -0.35
XRCC1-202ENST00000543982 GAPDHP04406 335 aaKnown RBP12.83□□□□□ -0.35
XRCC1-202ENST00000543982 RAB13P51153 203 aa12.83□□□□□ -0.35
XRCC1-202ENST00000543982 ID3Q02535 119 aa12.83□□□□□ -0.35
XRCC1-202ENST00000543982 CYB5R2Q6BCY4 276 aa12.83□□□□□ -0.35
XRCC1-202ENST00000543982 FAM71F2Q6NXP2 309 aa12.83□□□□□ -0.35
XRCC1-202ENST00000543982 CFHR4Q92496 578 aa12.83□□□□□ -0.35
XRCC1-202ENST00000543982 NSG2Q9Y328 171 aa12.83□□□□□ -0.35
XRCC1-202ENST00000543982 MMP24Q9Y5R2 645 aa12.83□□□□□ -0.35
XRCC1-202ENST00000543982 SETXQ7Z333 2677 aaKnown RBP12.83□□□□□ -0.36
XRCC1-202ENST00000543982 RBFOX2O43251 390 aaKnown RBP eCLIP12.83□□□□□ -0.36
XRCC1-202ENST00000543982 EPHA1P21709 976 aa12.83□□□□□ -0.36
XRCC1-202ENST00000543982 IL3RAP26951 378 aa12.83□□□□□ -0.36
XRCC1-202ENST00000543982 CXorf66Q5JRM2 361 aaPredicted RBP12.83□□□□□ -0.36
XRCC1-202ENST00000543982 SSX9Q7RTT3 188 aa12.83□□□□□ -0.36
XRCC1-202ENST00000543982 ZNF680Q8NEM1 530 aa12.83□□□□□ -0.36
XRCC1-202ENST00000543982 ADTRPQ96IZ2 230 aa12.83□□□□□ -0.36
XRCC1-202ENST00000543982 AMMECR1Q9Y4X0 333 aaPredicted RBP12.83□□□□□ -0.36
XRCC1-202ENST00000543982 ZFHX3Q15911 3703 aa12.83□□□□□ -0.36
XRCC1-202ENST00000543982 TRAV3A0A0B4J244 114 aa12.82□□□□□ -0.36
XRCC1-202ENST00000543982 KANTRA0A1W2PQU2 76 aa12.82□□□□□ -0.36
XRCC1-202ENST00000543982 MSGN1A6NI15 193 aa12.82□□□□□ -0.36
XRCC1-202ENST00000543982 GATA3P23771 443 aa12.82□□□□□ -0.36
XRCC1-202ENST00000543982 CNTFRP26992 372 aa12.82□□□□□ -0.36
XRCC1-202ENST00000543982 KIR2DS2P43631 304 aa12.82□□□□□ -0.36
XRCC1-202ENST00000543982 FAM120AOSQ5T036 256 aa12.82□□□□□ -0.36
XRCC1-202ENST00000543982 SLC51BQ86UW2 128 aa12.82□□□□□ -0.36
XRCC1-202ENST00000543982 PLEKHA2Q9HB19 425 aa12.82□□□□□ -0.36
XRCC1-202ENST00000543982 CACNG5Q9UF02 275 aa12.82□□□□□ -0.36
XRCC1-202ENST00000543982 RCL1Q9Y2P8 373 aaKnown RBP12.82□□□□□ -0.36
XRCC1-202ENST00000543982 H7C2Y5 167 aa12.81□□□□□ -0.36
XRCC1-202ENST00000543982 BCL2L11O43521 198 aa12.81□□□□□ -0.36
XRCC1-202ENST00000543982 HPRT1P00492 218 aa12.81□□□□□ -0.36
XRCC1-202ENST00000543982 LGALS4P56470 323 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms