RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 IL7P13232 177 aa13.51□□□□□ -0.25
RABGGTA-203ENST00000543002 PI3P19957 117 aa13.51□□□□□ -0.25
RABGGTA-203ENST00000543002 F2RP25116 425 aa13.51□□□□□ -0.25
RABGGTA-203ENST00000543002 KRTAP10-3P60369 221 aa13.51□□□□□ -0.25
RABGGTA-203ENST00000543002 UBE2KP61086 200 aa13.51□□□□□ -0.25
RABGGTA-203ENST00000543002 TBC1D26Q86UD7 250 aa13.51□□□□□ -0.25
RABGGTA-203ENST00000543002 PPP1R27Q86WC6 154 aa13.51□□□□□ -0.25
RABGGTA-203ENST00000543002 TEX45Q8NA69 505 aa13.51□□□□□ -0.25
RABGGTA-203ENST00000543002 WIPF2Q8TF74 440 aaPredicted RBP13.51□□□□□ -0.25
RABGGTA-203ENST00000543002 TPSG1Q9NRR2 321 aa13.51□□□□□ -0.25
RABGGTA-203ENST00000543002 MPPED1O15442 326 aa13.5□□□□□ -0.25
RABGGTA-203ENST00000543002 HPRT1P00492 218 aa13.5□□□□□ -0.25
RABGGTA-203ENST00000543002 HRASP01112 189 aa13.5□□□□□ -0.25
RABGGTA-203ENST00000543002 PIGPP57054 158 aa13.5□□□□□ -0.25
RABGGTA-203ENST00000543002 CLCC1Q96S66 551 aa13.5□□□□□ -0.25
RABGGTA-203ENST00000543002 OR51J1Q9H342 316 aa13.5□□□□□ -0.25
RABGGTA-203ENST00000543002 PLEKHA2Q9HB19 425 aa13.5□□□□□ -0.25
RABGGTA-203ENST00000543002 FAM212BQ9NTI7 297 aaPredicted RBP13.5□□□□□ -0.25
RABGGTA-203ENST00000543002 GPR132Q9UNW8 380 aa13.5□□□□□ -0.25
RABGGTA-203ENST00000543002 IGF1P05019 195 aa13.49□□□□□ -0.25
RABGGTA-203ENST00000543002 SAA1P0DJI8 122 aaPredicted RBP13.49□□□□□ -0.25
RABGGTA-203ENST00000543002 CX3CL1P78423 397 aa13.49□□□□□ -0.25
RABGGTA-203ENST00000543002 SHISA2Q6UWI4 295 aa13.49□□□□□ -0.25
RABGGTA-203ENST00000543002 ZNF562Q6V9R5 426 aa13.49□□□□□ -0.25
RABGGTA-203ENST00000543002 CENPVQ7Z7K6 275 aaPredicted RBP13.49□□□□□ -0.25
RABGGTA-203ENST00000543002 STPG2Q8N412 459 aa13.49□□□□□ -0.25
RABGGTA-203ENST00000543002 CCDC71LQ8N9Z2 235 aa13.49□□□□□ -0.25
RABGGTA-203ENST00000543002 CHPT1Q8WUD6 406 aa13.49□□□□□ -0.25
RABGGTA-203ENST00000543002 RHOVQ96L33 236 aa13.49□□□□□ -0.25
RABGGTA-203ENST00000543002 NOL4LQ96MY1 436 aaPredicted RBP13.49□□□□□ -0.25
RABGGTA-203ENST00000543002 SCGB3A2Q96PL1 93 aa13.49□□□□□ -0.25
RABGGTA-203ENST00000543002 AIFM2Q9BRQ8 373 aa13.49□□□□□ -0.25
RABGGTA-203ENST00000543002 RTBDNQ9BSG5 229 aaPredicted RBP13.49□□□□□ -0.25
RABGGTA-203ENST00000543002 CCDC32Q9BV29 185 aa13.49□□□□□ -0.25
RABGGTA-203ENST00000543002 COPZ2Q9P299 210 aa13.49□□□□□ -0.25
RABGGTA-203ENST00000543002 ZNF580Q9UK33 172 aa13.49□□□□□ -0.25
RABGGTA-203ENST00000543002 C14orf166Q9Y224 244 aaKnown RBP13.49□□□□□ -0.25
RABGGTA-203ENST00000543002 NAP1L6A6NFF2 107 aa13.48□□□□□ -0.25
RABGGTA-203ENST00000543002 S1PR2O95136 353 aa13.48□□□□□ -0.25
RABGGTA-203ENST00000543002 CA2P00918 260 aa13.48□□□□□ -0.25
RABGGTA-203ENST00000543002 CD40LGP29965 261 aa13.48□□□□□ -0.25
RABGGTA-203ENST00000543002 LPAR6P43657 344 aa13.48□□□□□ -0.25
RABGGTA-203ENST00000543002 TAS2R31P59538 309 aa13.48□□□□□ -0.25
RABGGTA-203ENST00000543002 SRSF4Q08170 494 aaKnown RBP13.48□□□□□ -0.25
RABGGTA-203ENST00000543002 MRGPRG-AS1Q2M3A8 158 aa13.48□□□□□ -0.25
RABGGTA-203ENST00000543002 ZNF585BQ52M93 769 aa13.48□□□□□ -0.25
RABGGTA-203ENST00000543002 VKORC1L1Q8N0U8 176 aa13.48□□□□□ -0.25
RABGGTA-203ENST00000543002 VSTM2AQ8TAG5 236 aa13.48□□□□□ -0.25
RABGGTA-203ENST00000543002 CITED1Q99966 193 aa13.48□□□□□ -0.25
RABGGTA-203ENST00000543002 WDR12Q9GZL7 423 aaKnown RBP13.48□□□□□ -0.25
RABGGTA-203ENST00000543002 C5orf66Q9H5L9 145 aa13.48□□□□□ -0.25
RABGGTA-203ENST00000543002 COMMD9Q9P000 198 aa13.48□□□□□ -0.25
RABGGTA-203ENST00000543002 LINC00527Q9UJ94 153 aa13.48□□□□□ -0.25
RABGGTA-203ENST00000543002 ATP6V0E1O15342 81 aa13.47□□□□□ -0.25
RABGGTA-203ENST00000543002 OR2A4O95047 310 aa13.47□□□□□ -0.25
RABGGTA-203ENST00000543002 NQO2P16083 231 aa13.47□□□□□ -0.25
RABGGTA-203ENST00000543002 NDPQ00604 133 aa13.47□□□□□ -0.25
RABGGTA-203ENST00000543002 PJVKQ0ZLH3 352 aa13.47□□□□□ -0.25
RABGGTA-203ENST00000543002 ZNF846Q147U1 533 aa13.47□□□□□ -0.25
RABGGTA-203ENST00000543002 POU2AF1Q16633 256 aa13.47□□□□□ -0.25
RABGGTA-203ENST00000543002 PRSS8Q16651 343 aa13.47□□□□□ -0.25
RABGGTA-203ENST00000543002 PUSL1Q8N0Z8 303 aaKnown RBP13.47□□□□□ -0.25
RABGGTA-203ENST00000543002 OR2A7Q96R45 310 aa13.47□□□□□ -0.25
RABGGTA-203ENST00000543002 C7orf50Q9BRJ6 194 aaKnown RBP13.47□□□□□ -0.25
RABGGTA-203ENST00000543002 PARP11Q9NR21 331 aa13.47□□□□□ -0.25
RABGGTA-203ENST00000543002 VSIG4Q9Y279 399 aa13.47□□□□□ -0.25
RABGGTA-203ENST00000543002 PLXNB1O43157 2135 aa13.47□□□□□ -0.25
RABGGTA-203ENST00000543002 LINC00854A0A1B0GVQ3 168 aa13.46□□□□□ -0.25
RABGGTA-203ENST00000543002 PSMB11A5LHX3 300 aa13.46□□□□□ -0.25
RABGGTA-203ENST00000543002 H0Y980 276 aa13.46□□□□□ -0.25
RABGGTA-203ENST00000543002 CREBL2O60519 120 aaPredicted RBP13.46□□□□□ -0.25
RABGGTA-203ENST00000543002 SSBP2P81877 361 aaPredicted RBP13.46□□□□□ -0.25
RABGGTA-203ENST00000543002 FXYD3Q14802 87 aa13.46□□□□□ -0.25
RABGGTA-203ENST00000543002 SSX9Q7RTT3 188 aa13.46□□□□□ -0.25
RABGGTA-203ENST00000543002 OR5AU1Q8NGC0 362 aa13.46□□□□□ -0.25
RABGGTA-203ENST00000543002 TMEM167AQ8TBQ9 72 aa13.46□□□□□ -0.25
RABGGTA-203ENST00000543002 R3HDM4Q96D70 268 aa13.46□□□□□ -0.25
RABGGTA-203ENST00000543002 SLC25A21Q9BQT8 299 aaPredicted RBP13.46□□□□□ -0.25
RABGGTA-203ENST00000543002 GON7Q9BXV9 100 aa13.46□□□□□ -0.25
RABGGTA-203ENST00000543002 FBXO7Q9Y3I1 522 aa13.46□□□□□ -0.25
RABGGTA-203ENST00000543002 C3orf85A0A1B0GTC6 90 aa13.45□□□□□ -0.26
RABGGTA-203ENST00000543002 CENPXA8MT69 81 aa13.45□□□□□ -0.26
RABGGTA-203ENST00000543002 ARPC1BO15143 372 aaKnown RBP13.45□□□□□ -0.26
RABGGTA-203ENST00000543002 FBXO24O75426 580 aa13.45□□□□□ -0.26
RABGGTA-203ENST00000543002 KBTBD11O94819 623 aa13.45□□□□□ -0.26
RABGGTA-203ENST00000543002 EGR2P11161 476 aaPredicted RBP13.45□□□□□ -0.26
RABGGTA-203ENST00000543002 CRIP2P52943 208 aaPredicted RBP13.45□□□□□ -0.26
RABGGTA-203ENST00000543002 SLC35B1P78383 322 aa13.45□□□□□ -0.26
RABGGTA-203ENST00000543002 OR4A47Q6IF82 309 aa13.45□□□□□ -0.26
RABGGTA-203ENST00000543002 C10orf99Q6UWK7 81 aa13.45□□□□□ -0.26
RABGGTA-203ENST00000543002 ZNF329Q86UD4 541 aa13.45□□□□□ -0.26
RABGGTA-203ENST00000543002 MMD2Q8IY49 270 aa13.45□□□□□ -0.26
RABGGTA-203ENST00000543002 OR4A5Q8NH83 315 aa13.45□□□□□ -0.26
RABGGTA-203ENST00000543002 ARPC1AQ92747 370 aa13.45□□□□□ -0.26
RABGGTA-203ENST00000543002 TP53RKQ96S44 253 aa13.45□□□□□ -0.26
RABGGTA-203ENST00000543002 ZNF430Q9H8G1 570 aaPredicted RBP13.45□□□□□ -0.26
RABGGTA-203ENST00000543002 BET1LQ9NYM9 111 aa13.45□□□□□ -0.26
RABGGTA-203ENST00000543002 TEX13DA0A0J9YY54 714 aaPredicted RBP13.44□□□□□ -0.26
RABGGTA-203ENST00000543002 CRYM-AS1A6NIL9 109 aa13.44□□□□□ -0.26
RABGGTA-203ENST00000543002 PLA2G10O15496 165 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms