RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 VAX2Q9UIW0 290 aa12.32□□□□□ -0.44
DDX55-209ENST00000542286 YLPM1P49750 1951 aaKnown RBP12.32□□□□□ -0.44
DDX55-209ENST00000542286 RBMXL2O75526 392 aaKnown RBP12.32□□□□□ -0.44
DDX55-209ENST00000542286 GCH1P30793 250 aa12.32□□□□□ -0.44
DDX55-209ENST00000542286 TAS2R30P59541 319 aa12.32□□□□□ -0.44
DDX55-209ENST00000542286 COA6Q5JTJ3 125 aaKnown RBP12.32□□□□□ -0.44
DDX55-209ENST00000542286 ZNF66Q6ZN08 573 aa12.32□□□□□ -0.44
DDX55-209ENST00000542286 IL22RA2Q969J5 263 aa12.32□□□□□ -0.44
DDX55-209ENST00000542286 OR4C12Q96R67 309 aa12.32□□□□□ -0.44
DDX55-209ENST00000542286 RBKSQ9H477 322 aa12.32□□□□□ -0.44
DDX55-209ENST00000542286 PROCRQ9UNN8 238 aa12.32□□□□□ -0.44
DDX55-209ENST00000542286 GOLT1BQ9Y3E0 138 aa12.32□□□□□ -0.44
DDX55-209ENST00000542286 HCFC1P51610 2035 aa12.32□□□□□ -0.44
DDX55-209ENST00000542286 DUXBA0A1W2PPF3 345 aa12.31□□□□□ -0.44
DDX55-209ENST00000542286 SPRY3O43610 288 aa12.31□□□□□ -0.44
DDX55-209ENST00000542286 TUBG1P23258 451 aa12.31□□□□□ -0.44
DDX55-209ENST00000542286 ERVFC1-1P60608 527 aa12.31□□□□□ -0.44
DDX55-209ENST00000542286 ZNF525Q8N782 197 aa12.31□□□□□ -0.44
DDX55-209ENST00000542286 NECAP1Q8NC96 275 aa12.31□□□□□ -0.44
DDX55-209ENST00000542286 TMEM208Q9BTX3 173 aa12.31□□□□□ -0.44
DDX55-209ENST00000542286 CXXC4Q9H2H0 198 aa12.31□□□□□ -0.44
DDX55-209ENST00000542286 LIN7CQ9NUP9 197 aaKnown RBP12.31□□□□□ -0.44
DDX55-209ENST00000542286 LAMP3Q9UQV4 416 aa12.31□□□□□ -0.44
DDX55-209ENST00000542286 ZG16O60844 167 aa12.31□□□□□ -0.44
DDX55-209ENST00000542286 PMS2P11Q13670 270 aa12.31□□□□□ -0.44
DDX55-209ENST00000542286 ZNF474Q6S9Z5 364 aaPredicted RBP12.31□□□□□ -0.44
DDX55-209ENST00000542286 BHLHA15Q7RTS1 189 aaPredicted RBP12.31□□□□□ -0.44
DDX55-209ENST00000542286 ODAMA1E959 279 aa12.3□□□□□ -0.44
DDX55-209ENST00000542286 NPIPB11E5RHQ5 1161 aa12.3□□□□□ -0.44
DDX55-209ENST00000542286 BAXQ07812 192 aa12.3□□□□□ -0.44
DDX55-209ENST00000542286 MOB1BQ7L9L4 216 aa12.3□□□□□ -0.44
DDX55-209ENST00000542286 MRPL41Q8IXM3 137 aaKnown RBP12.3□□□□□ -0.44
DDX55-209ENST00000542286 CTDSP1Q9GZU7 261 aa12.3□□□□□ -0.44
DDX55-209ENST00000542286 CISD1Q9NZ45 108 aaKnown RBP12.3□□□□□ -0.44
DDX55-209ENST00000542286 SH3BGRL2Q9UJC5 107 aa12.3□□□□□ -0.44
DDX55-209ENST00000542286 IGF2RP11717 2491 aa12.3□□□□□ -0.44
DDX55-209ENST00000542286 DLEU1O43261 78 aa12.3□□□□□ -0.44
DDX55-209ENST00000542286 IFNA5P01569 189 aa12.3□□□□□ -0.44
DDX55-209ENST00000542286 BCL2P10415 239 aa12.3□□□□□ -0.44
DDX55-209ENST00000542286 BMP5P22003 454 aa12.3□□□□□ -0.44
DDX55-209ENST00000542286 IQCJQ1A5X6 159 aa12.3□□□□□ -0.44
DDX55-209ENST00000542286 ZNF718Q3SXZ3 478 aa12.3□□□□□ -0.44
DDX55-209ENST00000542286 IGFL2Q6UWQ7 119 aa12.3□□□□□ -0.44
DDX55-209ENST00000542286 ZNF645Q8N7E2 425 aa12.3□□□□□ -0.44
DDX55-209ENST00000542286 HIPK2Q9H2X6 1198 aa12.3□□□□□ -0.44
DDX55-209ENST00000542286 TNCP24821 2201 aa12.3□□□□□ -0.44
DDX55-209ENST00000542286 CGAP01215 116 aa12.3□□□□□ -0.44
DDX55-209ENST00000542286 IGKV1D-33P01593 117 aa12.3□□□□□ -0.44
DDX55-209ENST00000542286 IGKV1-33P01594 117 aa12.3□□□□□ -0.44
DDX55-209ENST00000542286 PFN1P07737 140 aaKnown RBP12.3□□□□□ -0.44
DDX55-209ENST00000542286 NPSP0C0P6 89 aa12.3□□□□□ -0.44
DDX55-209ENST00000542286 CEACAM1P13688 526 aa12.3□□□□□ -0.44
DDX55-209ENST00000542286 MOGAT3Q86VF5 341 aa12.3□□□□□ -0.44
DDX55-209ENST00000542286 DEFB108BQ8NET1 73 aa12.3□□□□□ -0.44
DDX55-209ENST00000542286 TMEM37Q8WXS4 190 aa12.3□□□□□ -0.44
DDX55-209ENST00000542286 NINJ1Q92982 152 aa12.3□□□□□ -0.44
DDX55-209ENST00000542286 TMEM18Q96B42 140 aa12.3□□□□□ -0.44
DDX55-209ENST00000542286 RAB40CQ96S21 281 aa12.3□□□□□ -0.44
DDX55-209ENST00000542286 PLSCR4Q9NRQ2 329 aa12.3□□□□□ -0.44
DDX55-209ENST00000542286 IGKV1D-17A0A075B6S4 117 aa12.29□□□□□ -0.44
DDX55-209ENST00000542286 TRAV1-1A0A0B4J248 108 aa12.29□□□□□ -0.44
DDX55-209ENST00000542286 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.29□□□□□ -0.44
DDX55-209ENST00000542286 PROP1O75360 226 aa12.29□□□□□ -0.44
DDX55-209ENST00000542286 EDDM3BP56851 147 aa12.29□□□□□ -0.44
DDX55-209ENST00000542286 CLEC12BQ2HXU8 276 aa12.29□□□□□ -0.44
DDX55-209ENST00000542286 DPPA3Q6W0C5 159 aa12.29□□□□□ -0.44
DDX55-209ENST00000542286 FAM215AQ9Y5M1 114 aa12.29□□□□□ -0.44
DDX55-209ENST00000542286 ATRXP46100 2492 aa12.29□□□□□ -0.44
DDX55-209ENST00000542286 TMEM210A6NLX4 147 aa12.29□□□□□ -0.44
DDX55-209ENST00000542286 PPP5D1E7EU14 171 aa12.29□□□□□ -0.44
DDX55-209ENST00000542286 GZMHP20718 246 aa12.29□□□□□ -0.44
DDX55-209ENST00000542286 PRDX2P32119 198 aa12.29□□□□□ -0.44
DDX55-209ENST00000542286 RPL39P5Q59GN2 51 aa12.29□□□□□ -0.44
DDX55-209ENST00000542286 NCR3LG1Q68D85 454 aa12.29□□□□□ -0.44
DDX55-209ENST00000542286 SCGB1C1Q8TD33 95 aa12.29□□□□□ -0.44
DDX55-209ENST00000542286 LSM10Q969L4 123 aaKnown RBP12.29□□□□□ -0.44
DDX55-209ENST00000542286 OR2V2Q96R30 315 aa12.29□□□□□ -0.44
DDX55-209ENST00000542286 OOEPA6NGQ2 149 aa12.28□□□□□ -0.44
DDX55-209ENST00000542286 A6NNC1 897 aa12.28□□□□□ -0.44
DDX55-209ENST00000542286 SCGB1D1O95968 90 aa12.28□□□□□ -0.44
DDX55-209ENST00000542286 PDLIM4P50479 330 aa12.28□□□□□ -0.44
DDX55-209ENST00000542286 FAM27E3Q08E93 113 aa12.28□□□□□ -0.44
DDX55-209ENST00000542286 ADIRFQ15847 76 aa12.28□□□□□ -0.44
DDX55-209ENST00000542286 C1orf229Q6ZS94 237 aaPredicted RBP12.28□□□□□ -0.44
DDX55-209ENST00000542286 C16orf82Q7Z2V1 217 aa12.28□□□□□ -0.44
DDX55-209ENST00000542286 ZCCHC24Q8N2G6 241 aaKnown RBP12.28□□□□□ -0.44
DDX55-209ENST00000542286 SNRNP40Q96DI7 357 aaKnown RBP12.28□□□□□ -0.44
DDX55-209ENST00000542286 ACY3Q96HD9 319 aa12.28□□□□□ -0.44
DDX55-209ENST00000542286 PYGO2Q9BRQ0 406 aa12.28□□□□□ -0.44
DDX55-209ENST00000542286 SLC25A15Q9Y619 301 aa12.28□□□□□ -0.44
DDX55-209ENST00000542286 ASH1LQ9NR48 2969 aaKnown RBP12.28□□□□□ -0.44
DDX55-209ENST00000542286 C1QTNF9BB2RNN3 333 aa12.28□□□□□ -0.44
DDX55-209ENST00000542286 RPL29P47914 159 aaKnown RBP12.28□□□□□ -0.44
DDX55-209ENST00000542286 SLC38A11Q08AI6 406 aa12.28□□□□□ -0.44
DDX55-209ENST00000542286 ZNF787Q6DD87 383 aa12.28□□□□□ -0.44
DDX55-209ENST00000542286 GATAD1Q8WUU5 269 aa12.28□□□□□ -0.44
DDX55-209ENST00000542286 IFNL4K9M1U5 179 aa12.27□□□□□ -0.44
DDX55-209ENST00000542286 IGLV1-44P01699 117 aa12.27□□□□□ -0.44
DDX55-209ENST00000542286 CD82P27701 267 aa12.27□□□□□ -0.44
DDX55-209ENST00000542286 ZNF134P52741 427 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms