RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 TIPINQ9BVW5 301 aa0.74□□□□□ -2.29
CCDC7-208ENST00000537047 NDEL1Q9GZM8 345 aa0.74□□□□□ -2.29
CCDC7-208ENST00000537047 CFAP45Q9UL16 551 aa0.74□□□□□ -2.29
CCDC7-208ENST00000537047 TIMM9Q9Y5J7 89 aa0.74□□□□□ -2.29
CCDC7-208ENST00000537047 DSCAMO60469 2012 aa0.74□□□□□ -2.29
CCDC7-208ENST00000537047 DICER1Q9UPY3 1922 aaKnown RBP0.74□□□□□ -2.29
CCDC7-208ENST00000537047 A0A0J9YW62 118 aa0.73□□□□□ -2.29
CCDC7-208ENST00000537047 CREBL2O60519 120 aaPredicted RBP0.73□□□□□ -2.29
CCDC7-208ENST00000537047 PGLYRP1O75594 196 aaPredicted RBP0.73□□□□□ -2.29
CCDC7-208ENST00000537047 IL6P05231 212 aa0.73□□□□□ -2.29
CCDC7-208ENST00000537047 HLA-DQB2P05538 268 aa0.73□□□□□ -2.29
CCDC7-208ENST00000537047 CXCL2P19875 107 aa0.73□□□□□ -2.29
CCDC7-208ENST00000537047 CXCL3P19876 107 aa0.73□□□□□ -2.29
CCDC7-208ENST00000537047 DDTP30046 118 aa0.73□□□□□ -2.29
CCDC7-208ENST00000537047 HLA-DRB3P79483 266 aa0.73□□□□□ -2.29
CCDC7-208ENST00000537047 ZNF705AQ6ZN79 300 aaPredicted RBP0.73□□□□□ -2.29
CCDC7-208ENST00000537047 KTN1-AS1Q86SY8 53 aa0.73□□□□□ -2.29
CCDC7-208ENST00000537047 CD302Q8IX05 232 aa0.73□□□□□ -2.29
CCDC7-208ENST00000537047 RIBC1Q8N443 379 aaPredicted RBP0.73□□□□□ -2.29
CCDC7-208ENST00000537047 OR51T1Q8NGJ9 327 aa0.73□□□□□ -2.29
CCDC7-208ENST00000537047 SLC37A2Q8TED4 501 aa0.73□□□□□ -2.29
CCDC7-208ENST00000537047 ASB13Q8WXK3 278 aa0.73□□□□□ -2.29
CCDC7-208ENST00000537047 RNASE6Q93091 150 aaKnown RBP0.73□□□□□ -2.29
CCDC7-208ENST00000537047 NMNAT3Q96T66 252 aa0.73□□□□□ -2.29
CCDC7-208ENST00000537047 DCUN1D5Q9BTE7 237 aa0.73□□□□□ -2.29
CCDC7-208ENST00000537047 TMEM109Q9BVC6 243 aa0.73□□□□□ -2.29
CCDC7-208ENST00000537047 MS4A6AQ9H2W1 248 aa0.73□□□□□ -2.29
CCDC7-208ENST00000537047 MED9Q9NWA0 146 aa0.73□□□□□ -2.29
CCDC7-208ENST00000537047 ZNHIT6Q9NWK9 470 aaKnown RBP0.73□□□□□ -2.29
CCDC7-208ENST00000537047 NUMA1Q14980 2115 aa0.73□□□□□ -2.29
CCDC7-208ENST00000537047 NUP160Q12769 1436 aa0.72□□□□□ -2.29
CCDC7-208ENST00000537047 TMED7-TICAM2A0A0A6YYA0 188 aa0.72□□□□□ -2.29
CCDC7-208ENST00000537047 IGHV1-18A0A0C4DH31 117 aa0.72□□□□□ -2.29
CCDC7-208ENST00000537047 HMSDA8MTL9 139 aa0.72□□□□□ -2.29
CCDC7-208ENST00000537047 HPGDSO60760 199 aa0.72□□□□□ -2.29
CCDC7-208ENST00000537047 OCMP0CE72 109 aaPredicted RBP0.72□□□□□ -2.29
CCDC7-208ENST00000537047 GPX2P18283 190 aa0.72□□□□□ -2.29
CCDC7-208ENST00000537047 CA5AP35218 305 aa0.72□□□□□ -2.29
CCDC7-208ENST00000537047 CLDN12P56749 244 aa0.72□□□□□ -2.29
CCDC7-208ENST00000537047 TPI1P60174 286 aa0.72□□□□□ -2.29
CCDC7-208ENST00000537047 HIST1H4AP62805 103 aaKnown RBP0.72□□□□□ -2.29
CCDC7-208ENST00000537047 MGAT3Q09327 533 aa0.72□□□□□ -2.29
CCDC7-208ENST00000537047 TMED1Q13445 227 aa0.72□□□□□ -2.29
CCDC7-208ENST00000537047 JOSD1Q15040 202 aaPredicted RBP0.72□□□□□ -2.29
CCDC7-208ENST00000537047 FAM19A5Q7Z5A7 132 aaPredicted RBP0.72□□□□□ -2.29
CCDC7-208ENST00000537047 GPHB5Q86YW7 130 aa0.72□□□□□ -2.29
CCDC7-208ENST00000537047 OR7G1Q8NGA0 311 aa0.72□□□□□ -2.29
CCDC7-208ENST00000537047 ANKRD36BP1Q96IX9 119 aa0.72□□□□□ -2.29
CCDC7-208ENST00000537047 ATP6V1G3Q96LB4 118 aa0.72□□□□□ -2.29
CCDC7-208ENST00000537047 DHRS9Q9BPW9 319 aa0.72□□□□□ -2.29
CCDC7-208ENST00000537047 WDR54Q9H977 334 aa0.72□□□□□ -2.29
CCDC7-208ENST00000537047 PCDH15Q96QU1 1955 aa0.72□□□□□ -2.29
CCDC7-208ENST00000537047 RAD50Q92878 1312 aa0.71□□□□□ -2.3
CCDC7-208ENST00000537047 TRAV7A0A075B6U4 112 aa0.71□□□□□ -2.3
CCDC7-208ENST00000537047 H7C2G1 150 aa0.71□□□□□ -2.3
CCDC7-208ENST00000537047 ATP8B1O43520 1251 aa0.71□□□□□ -2.3
CCDC7-208ENST00000537047 MRPS14O60783 128 aaKnown RBP0.71□□□□□ -2.3
CCDC7-208ENST00000537047 NDUFS6O75380 124 aaKnown RBP0.71□□□□□ -2.3
CCDC7-208ENST00000537047 APOMO95445 188 aa0.71□□□□□ -2.3
CCDC7-208ENST00000537047 NPPAP01160 153 aa0.71□□□□□ -2.3
CCDC7-208ENST00000537047 CD40LGP29965 261 aa0.71□□□□□ -2.3
CCDC7-208ENST00000537047 SLCO1A2P46721 670 aa0.71□□□□□ -2.3
CCDC7-208ENST00000537047 EVX1P49640 407 aa0.71□□□□□ -2.3
CCDC7-208ENST00000537047 SLC36A2Q495M3 483 aa0.71□□□□□ -2.3
CCDC7-208ENST00000537047 RASSF6Q6ZTQ3 369 aa0.71□□□□□ -2.3
CCDC7-208ENST00000537047 PACRGLQ8N7B6 248 aa0.71□□□□□ -2.3
CCDC7-208ENST00000537047 JOSD2Q8TAC2 188 aa0.71□□□□□ -2.3
CCDC7-208ENST00000537047 RAB2BQ8WUD1 216 aa0.71□□□□□ -2.3
CCDC7-208ENST00000537047 SMIM19Q96E16 107 aa0.71□□□□□ -2.3
CCDC7-208ENST00000537047 IMMP2LQ96T52 175 aa0.71□□□□□ -2.3
CCDC7-208ENST00000537047 CCL13Q99616 98 aa0.71□□□□□ -2.3
CCDC7-208ENST00000537047 TTTY13Q9BZ97 58 aa0.71□□□□□ -2.3
CCDC7-208ENST00000537047 SPACA1Q9HBV2 294 aa0.71□□□□□ -2.3
CCDC7-208ENST00000537047 XAGE1AQ9HD64 81 aa0.71□□□□□ -2.3
CCDC7-208ENST00000537047 EURLQ9NYK6 297 aa0.71□□□□□ -2.3
CCDC7-208ENST00000537047 DLG5Q8TDM6 1919 aa0.71□□□□□ -2.3
CCDC7-208ENST00000537047 ABCC12Q96J65 1359 aa0.7□□□□□ -2.3
CCDC7-208ENST00000537047 IGKV1-9A0A0C4DH69 117 aa0.7□□□□□ -2.3
CCDC7-208ENST00000537047 TINCRA0A1B0GVN0 87 aa0.7□□□□□ -2.3
CCDC7-208ENST00000537047 FABP12A6NFH5 140 aa0.7□□□□□ -2.3
CCDC7-208ENST00000537047 CALUO43852 315 aaPredicted RBP0.7□□□□□ -2.3
CCDC7-208ENST00000537047 CIAO1O76071 339 aa0.7□□□□□ -2.3
CCDC7-208ENST00000537047 RPSAP08865 295 aaKnown RBP0.7□□□□□ -2.3
CCDC7-208ENST00000537047 LGALS1P09382 135 aaKnown RBP0.7□□□□□ -2.3
CCDC7-208ENST00000537047 UGT2B7P16662 529 aa0.7□□□□□ -2.3
CCDC7-208ENST00000537047 PSMB6P28072 239 aa0.7□□□□□ -2.3
CCDC7-208ENST00000537047 CXCR4P61073 352 aa0.7□□□□□ -2.3
CCDC7-208ENST00000537047 CDK5R1Q15078 307 aa0.7□□□□□ -2.3
CCDC7-208ENST00000537047 C9orf64Q5T6V5 341 aa0.7□□□□□ -2.3
CCDC7-208ENST00000537047 TNFAIP8L2Q6P589 184 aaPredicted RBP0.7□□□□□ -2.3
CCDC7-208ENST00000537047 FP248Q71RG6 208 aaPredicted RBP0.7□□□□□ -2.3
CCDC7-208ENST00000537047 SLC36A1Q7Z2H8 476 aa0.7□□□□□ -2.3
CCDC7-208ENST00000537047 TMEM86AQ8N2M4 240 aa0.7□□□□□ -2.3
CCDC7-208ENST00000537047 RPP25LQ8N5L8 163 aaKnown RBP0.7□□□□□ -2.3
CCDC7-208ENST00000537047 HAVCR2Q8TDQ0 301 aa0.7□□□□□ -2.3
CCDC7-208ENST00000537047 MBD3L1Q8WWY6 194 aa0.7□□□□□ -2.3
CCDC7-208ENST00000537047 GNPNAT1Q96EK6 184 aaPredicted RBP0.7□□□□□ -2.3
CCDC7-208ENST00000537047 DERL2Q9GZP9 239 aa0.7□□□□□ -2.3
CCDC7-208ENST00000537047 CHST6Q9GZX3 395 aa0.7□□□□□ -2.3
CCDC7-208ENST00000537047 RBM7Q9Y580 266 aaKnown RBP0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms