RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 NUBP2Q9Y5Y2 271 aa17.8■□□□□ 0.44
SFSWAP-204ENST00000535399 NBEAL1Q6ZS30 2694 aa17.8■□□□□ 0.44
SFSWAP-204ENST00000535399 PGLYRP1O75594 196 aaPredicted RBP17.79■□□□□ 0.44
SFSWAP-204ENST00000535399 ELANEP08246 267 aa17.79■□□□□ 0.44
SFSWAP-204ENST00000535399 SAA1P0DJI8 122 aaPredicted RBP17.79■□□□□ 0.44
SFSWAP-204ENST00000535399 TAS2R19P59542 299 aa17.79■□□□□ 0.44
SFSWAP-204ENST00000535399 RPL23AP62750 156 aaKnown RBP17.79■□□□□ 0.44
SFSWAP-204ENST00000535399 CATR1Q13166 79 aa17.79■□□□□ 0.44
SFSWAP-204ENST00000535399 FXYD3Q14802 87 aa17.79■□□□□ 0.44
SFSWAP-204ENST00000535399 KHDC1LQ5JSQ8 128 aa17.79■□□□□ 0.44
SFSWAP-204ENST00000535399 IDO2Q6ZQW0 420 aa17.79■□□□□ 0.44
SFSWAP-204ENST00000535399 LHFPL1Q86WI0 220 aa17.79■□□□□ 0.44
SFSWAP-204ENST00000535399 SPAG16Q8N0X2 631 aa17.79■□□□□ 0.44
SFSWAP-204ENST00000535399 MINDY2Q8NBR6 621 aa17.79■□□□□ 0.44
SFSWAP-204ENST00000535399 OR51H1Q8NH63 302 aa17.79■□□□□ 0.44
SFSWAP-204ENST00000535399 GPR31O00270 319 aa17.78■□□□□ 0.44
SFSWAP-204ENST00000535399 RBFOX2O43251 390 aaKnown RBP eCLIP17.78■□□□□ 0.44
SFSWAP-204ENST00000535399 RAMP3O60896 148 aa17.78■□□□□ 0.44
SFSWAP-204ENST00000535399 IFNA6P05013 189 aa17.78■□□□□ 0.44
SFSWAP-204ENST00000535399 PSMB8P28062 276 aa17.78■□□□□ 0.44
SFSWAP-204ENST00000535399 UCP3P55916 312 aa17.78■□□□□ 0.44
SFSWAP-204ENST00000535399 PRSS8Q16651 343 aa17.78■□□□□ 0.44
SFSWAP-204ENST00000535399 ECSCRQ19T08 205 aa17.78■□□□□ 0.44
SFSWAP-204ENST00000535399 STEAP1BQ6NZ63 245 aa17.78■□□□□ 0.44
SFSWAP-204ENST00000535399 LCNL1Q6ZST4 164 aa17.78■□□□□ 0.44
SFSWAP-204ENST00000535399 ARRDC1Q8N5I2 433 aa17.78■□□□□ 0.44
SFSWAP-204ENST00000535399 ABHD5Q8WTS1 349 aa17.78■□□□□ 0.44
SFSWAP-204ENST00000535399 ARPC1AQ92747 370 aa17.78■□□□□ 0.44
SFSWAP-204ENST00000535399 R3HDM4Q96D70 268 aa17.78■□□□□ 0.44
SFSWAP-204ENST00000535399 FAM103A1Q9BTL3 118 aaKnown RBP17.78■□□□□ 0.44
SFSWAP-204ENST00000535399 RSRP1Q9BUV0 290 aa17.78■□□□□ 0.44
SFSWAP-204ENST00000535399 ZFP57Q9NU63 452 aa17.78■□□□□ 0.44
SFSWAP-204ENST00000535399 RAB3DO95716 219 aa17.77■□□□□ 0.44
SFSWAP-204ENST00000535399 IGLV1-40P01703 118 aa17.77■□□□□ 0.44
SFSWAP-204ENST00000535399 RPLP1P05386 114 aaKnown RBP17.77■□□□□ 0.44
SFSWAP-204ENST00000535399 GNB1P62873 340 aa17.77■□□□□ 0.44
SFSWAP-204ENST00000535399 CXorf66Q5JRM2 361 aaPredicted RBP17.77■□□□□ 0.44
SFSWAP-204ENST00000535399 LPCAT3Q6P1A2 487 aa17.77■□□□□ 0.44
SFSWAP-204ENST00000535399 C18orf65Q6ZTR6 163 aa17.77■□□□□ 0.44
SFSWAP-204ENST00000535399 CMTM1Q8IZ96 169 aa17.77■□□□□ 0.44
SFSWAP-204ENST00000535399 VKORC1L1Q8N0U8 176 aa17.77■□□□□ 0.44
SFSWAP-204ENST00000535399 OR4F17Q8NGA8 305 aa17.77■□□□□ 0.44
SFSWAP-204ENST00000535399 GRPEL2Q8TAA5 225 aa17.77■□□□□ 0.44
SFSWAP-204ENST00000535399 OR4F4Q96R69 305 aa17.77■□□□□ 0.44
SFSWAP-204ENST00000535399 V9GYH0 126 aa17.77■□□□□ 0.44
SFSWAP-204ENST00000535399 ZNF735P0CB33 412 aa17.76■□□□□ 0.43
SFSWAP-204ENST00000535399 S100A5P33763 92 aa17.76■□□□□ 0.43
SFSWAP-204ENST00000535399 PHLDA2Q53GA4 152 aa17.76■□□□□ 0.43
SFSWAP-204ENST00000535399 CCDC190Q86UF4 302 aa17.76■□□□□ 0.43
SFSWAP-204ENST00000535399 KLK15Q9H2R5 256 aa17.76■□□□□ 0.43
SFSWAP-204ENST00000535399 SOX15O60248 233 aa17.75■□□□□ 0.43
SFSWAP-204ENST00000535399 CNIH1O95406 144 aa17.75■□□□□ 0.43
SFSWAP-204ENST00000535399 RLN1P04808 185 aa17.75■□□□□ 0.43
SFSWAP-204ENST00000535399 TMEM267Q0VDI3 215 aaPredicted RBP17.75■□□□□ 0.43
SFSWAP-204ENST00000535399 AKIRIN2Q53H80 203 aa17.75■□□□□ 0.43
SFSWAP-204ENST00000535399 SLC38A6Q8IZM9 456 aa17.75■□□□□ 0.43
SFSWAP-204ENST00000535399 PUSL1Q8N0Z8 303 aaKnown RBP17.75■□□□□ 0.43
SFSWAP-204ENST00000535399 TCTEX1D1Q8N7M0 179 aa17.75■□□□□ 0.43
SFSWAP-204ENST00000535399 LFNGQ8NES3 379 aa17.75■□□□□ 0.43
SFSWAP-204ENST00000535399 MYOZ3Q8TDC0 251 aa17.75■□□□□ 0.43
SFSWAP-204ENST00000535399 CD300LFQ8TDQ1 290 aa17.75■□□□□ 0.43
SFSWAP-204ENST00000535399 RHOVQ96L33 236 aa17.75■□□□□ 0.43
SFSWAP-204ENST00000535399 ZNF430Q9H8G1 570 aaPredicted RBP17.75■□□□□ 0.43
SFSWAP-204ENST00000535399 FOXA2Q9Y261 457 aaPredicted RBP17.75■□□□□ 0.43
SFSWAP-204ENST00000535399 ANKRD20A5PA0PJZ0 165 aa17.74■□□□□ 0.43
SFSWAP-204ENST00000535399 OR2A4O95047 310 aa17.74■□□□□ 0.43
SFSWAP-204ENST00000535399 HRASP01112 189 aa17.74■□□□□ 0.43
SFSWAP-204ENST00000535399 MEF2DQ14814 521 aa17.74■□□□□ 0.43
SFSWAP-204ENST00000535399 ZNF79Q15937 498 aa17.74■□□□□ 0.43
SFSWAP-204ENST00000535399 FAAP20Q6NZ36 180 aa17.74■□□□□ 0.43
SFSWAP-204ENST00000535399 UNQ5815/PRO19632Q6UWF5 114 aa17.74■□□□□ 0.43
SFSWAP-204ENST00000535399 OR2A7Q96R45 310 aa17.74■□□□□ 0.43
SFSWAP-204ENST00000535399 A0A1W2PN81 502 aa17.73■□□□□ 0.43
SFSWAP-204ENST00000535399 HPRT1P00492 218 aa17.73■□□□□ 0.43
SFSWAP-204ENST00000535399 PF4V1P10720 104 aa17.73■□□□□ 0.43
SFSWAP-204ENST00000535399 F2RP25116 425 aa17.73■□□□□ 0.43
SFSWAP-204ENST00000535399 CHRNA7P36544 502 aa17.73■□□□□ 0.43
SFSWAP-204ENST00000535399 TAS2R31P59538 309 aa17.73■□□□□ 0.43
SFSWAP-204ENST00000535399 KIAA0141Q14154 515 aaPredicted RBP17.73■□□□□ 0.43
SFSWAP-204ENST00000535399 POU2AF1Q16633 256 aa17.73■□□□□ 0.43
SFSWAP-204ENST00000535399 POC5Q8NA72 575 aa17.73■□□□□ 0.43
SFSWAP-204ENST00000535399 OR4C16Q8NGL9 310 aa17.73■□□□□ 0.43
SFSWAP-204ENST00000535399 OR6Q1Q8NGQ2 317 aa17.73■□□□□ 0.43
SFSWAP-204ENST00000535399 TERB2Q8NHR7 220 aa17.73■□□□□ 0.43
SFSWAP-204ENST00000535399 VSTM2AQ8TAG5 236 aa17.73■□□□□ 0.43
SFSWAP-204ENST00000535399 TMEM167AQ8TBQ9 72 aa17.73■□□□□ 0.43
SFSWAP-204ENST00000535399 PLEKHA2Q9HB19 425 aa17.73■□□□□ 0.43
SFSWAP-204ENST00000535399 TNCP24821 2201 aa17.72■□□□□ 0.43
SFSWAP-204ENST00000535399 CREBL2O60519 120 aaPredicted RBP17.72■□□□□ 0.43
SFSWAP-204ENST00000535399 KBTBD11O94819 623 aa17.72■□□□□ 0.43
SFSWAP-204ENST00000535399 S1PR2O95136 353 aa17.72■□□□□ 0.43
SFSWAP-204ENST00000535399 AKAIN1P0CW23 69 aa17.72■□□□□ 0.43
SFSWAP-204ENST00000535399 PGAM2P15259 253 aa17.72■□□□□ 0.43
SFSWAP-204ENST00000535399 ETV6P41212 452 aa17.72■□□□□ 0.43
SFSWAP-204ENST00000535399 CDX1P47902 265 aaPredicted RBP17.72■□□□□ 0.43
SFSWAP-204ENST00000535399 TNXAQ16473 311 aa17.72■□□□□ 0.43
SFSWAP-204ENST00000535399 ZNF585BQ52M93 769 aa17.72■□□□□ 0.43
SFSWAP-204ENST00000535399 PYDC2Q56P42 97 aa17.72■□□□□ 0.43
SFSWAP-204ENST00000535399 ASPHD1Q5U4P2 390 aa17.72■□□□□ 0.43
SFSWAP-204ENST00000535399 SSX9Q7RTT3 188 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 246.5 ms