RNA–Protein interactions for RNA: ENST00000533801.6

ATP2C1-224, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,690 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-224ENST00000533801 LINC01560Q8TB33 94 aa13.19□□□□□ -0.3
ATP2C1-224ENST00000533801 LURAP1Q96LR2 239 aa13.19□□□□□ -0.3
ATP2C1-224ENST00000533801 SFXN3Q9BWM7 321 aa13.19□□□□□ -0.3
ATP2C1-224ENST00000533801 DPRXA6NFQ7 191 aa13.19□□□□□ -0.3
ATP2C1-224ENST00000533801 SRP19P09132 144 aaKnown RBP13.19□□□□□ -0.3
ATP2C1-224ENST00000533801 CD200P41217 278 aa13.19□□□□□ -0.3
ATP2C1-224ENST00000533801 RPS23P62266 143 aaKnown RBP13.19□□□□□ -0.3
ATP2C1-224ENST00000533801 C10orf91Q5T1B1 145 aa13.19□□□□□ -0.3
ATP2C1-224ENST00000533801 C1orf229Q6ZS94 237 aaPredicted RBP13.19□□□□□ -0.3
ATP2C1-224ENST00000533801 AGMATQ9BSE5 352 aa13.19□□□□□ -0.3
ATP2C1-224ENST00000533801 TMEM140Q9NV12 185 aa13.19□□□□□ -0.3
ATP2C1-224ENST00000533801 CACNA1AO00555 2505 aa13.18□□□□□ -0.3
ATP2C1-224ENST00000533801 SAA2-SAA4A0A096LPE2 208 aa13.18□□□□□ -0.3
ATP2C1-224ENST00000533801 SAA2P0DJI9 122 aaPredicted RBP13.18□□□□□ -0.3
ATP2C1-224ENST00000533801 CLDND2Q8NHS1 167 aa13.18□□□□□ -0.3
ATP2C1-224ENST00000533801 ENY2Q9NPA8 101 aa13.18□□□□□ -0.3
ATP2C1-224ENST00000533801 IGHV3-72A0A0B4J1Y9 119 aa13.18□□□□□ -0.3
ATP2C1-224ENST00000533801 A0A0U1RQK1 487 aa13.18□□□□□ -0.3
ATP2C1-224ENST00000533801 ACTL6BO94805 426 aa13.18□□□□□ -0.3
ATP2C1-224ENST00000533801 SLC25A6P12236 298 aa13.18□□□□□ -0.3
ATP2C1-224ENST00000533801 LRRC75BQ2VPJ9 315 aa13.18□□□□□ -0.3
ATP2C1-224ENST00000533801 RPP25LQ8N5L8 163 aaKnown RBP13.18□□□□□ -0.3
ATP2C1-224ENST00000533801 CTRB1P17538 263 aa13.18□□□□□ -0.3
ATP2C1-224ENST00000533801 PDLIM3Q53GG5 364 aaPredicted RBP13.18□□□□□ -0.3
ATP2C1-224ENST00000533801 CT45A1Q5HYN5 189 aa13.18□□□□□ -0.3
ATP2C1-224ENST00000533801 CTRB2Q6GPI1 263 aa13.18□□□□□ -0.3
ATP2C1-224ENST00000533801 CT45A3Q8NHU0 189 aa13.18□□□□□ -0.3
ATP2C1-224ENST00000533801 OR6C3Q9NZP0 311 aa13.18□□□□□ -0.3
ATP2C1-224ENST00000533801 RRHO14718 337 aa13.17□□□□□ -0.3
ATP2C1-224ENST00000533801 IGFL3Q6UXB1 125 aa13.17□□□□□ -0.3
ATP2C1-224ENST00000533801 SCRT1Q9BWW7 348 aa13.17□□□□□ -0.3
ATP2C1-224ENST00000533801 HIPK2Q9H2X6 1198 aa13.17□□□□□ -0.3
ATP2C1-224ENST00000533801 LYPD6BQ8NI32 183 aa13.17□□□□□ -0.3
ATP2C1-224ENST00000533801 HSPB7Q9UBY9 170 aa13.17□□□□□ -0.3
ATP2C1-224ENST00000533801 TANC2Q9HCD6 1990 aa13.17□□□□□ -0.3
ATP2C1-224ENST00000533801 TIMP3P35625 211 aa13.17□□□□□ -0.3
ATP2C1-224ENST00000533801 RPL31P62899 125 aaKnown RBP13.17□□□□□ -0.3
ATP2C1-224ENST00000533801 KRTCAP3Q53RY4 240 aa13.17□□□□□ -0.3
ATP2C1-224ENST00000533801 BIN3Q9NQY0 253 aa13.17□□□□□ -0.3
ATP2C1-224ENST00000533801 A0A1W2PPV4 95 aa13.16□□□□□ -0.3
ATP2C1-224ENST00000533801 ENSAO43768 121 aaKnown RBP13.16□□□□□ -0.3
ATP2C1-224ENST00000533801 NCMAPQ5T1S8 102 aa13.16□□□□□ -0.3
ATP2C1-224ENST00000533801 SMIM7Q9BQ49 75 aa13.16□□□□□ -0.3
ATP2C1-224ENST00000533801 TMEM147Q9BVK8 224 aa13.16□□□□□ -0.3
ATP2C1-224ENST00000533801 BSNQ9UPA5 3926 aa13.16□□□□□ -0.3
ATP2C1-224ENST00000533801 BCL2P10415 239 aa13.16□□□□□ -0.3
ATP2C1-224ENST00000533801 ZBTB34Q8NCN2 500 aa13.16□□□□□ -0.3
ATP2C1-224ENST00000533801 PRR7Q8TB68 274 aa13.16□□□□□ -0.3
ATP2C1-224ENST00000533801 SLC25A10Q9UBX3 287 aaPredicted RBP13.16□□□□□ -0.3
ATP2C1-224ENST00000533801 TGIF2-C20orf24A0A0A6YYL0 155 aa13.16□□□□□ -0.3
ATP2C1-224ENST00000533801 PIGBOS1A0A0B4J2F0 54 aa13.16□□□□□ -0.3
ATP2C1-224ENST00000533801 CYB5BO43169 146 aa13.16□□□□□ -0.3
ATP2C1-224ENST00000533801 PAGE4O60829 102 aa13.16□□□□□ -0.3
ATP2C1-224ENST00000533801 TMEM41BQ5BJD5 291 aa13.16□□□□□ -0.3
ATP2C1-224ENST00000533801 Q8TCH9 128 aa13.16□□□□□ -0.3
ATP2C1-224ENST00000533801 IFI27L2Q9H2X8 130 aa13.16□□□□□ -0.3
ATP2C1-224ENST00000533801 SVEP1Q4LDE5 3571 aa13.15□□□□□ -0.3
ATP2C1-224ENST00000533801 LY6HO94772 140 aa13.15□□□□□ -0.3
ATP2C1-224ENST00000533801 RAB5AP20339 215 aa13.15□□□□□ -0.3
ATP2C1-224ENST00000533801 EIF2S3LQ2VIR3 472 aaKnown RBP13.15□□□□□ -0.3
ATP2C1-224ENST00000533801 MIC13Q5XKP0 118 aa13.15□□□□□ -0.3
ATP2C1-224ENST00000533801 WFIKKN1Q96NZ8 548 aa13.15□□□□□ -0.3
ATP2C1-224ENST00000533801 UNKLQ9H9P5 680 aaKnown RBP13.15□□□□□ -0.3
ATP2C1-224ENST00000533801 ZNF66Q6ZN08 573 aa13.15□□□□□ -0.3
ATP2C1-224ENST00000533801 RAB24Q969Q5 203 aa13.15□□□□□ -0.3
ATP2C1-224ENST00000533801 PINX1Q96BK5 328 aaKnown RBP13.15□□□□□ -0.3
ATP2C1-224ENST00000533801 TVP23CQ96ET8 276 aa13.15□□□□□ -0.3
ATP2C1-224ENST00000533801 RAB29O14966 203 aa13.15□□□□□ -0.31
ATP2C1-224ENST00000533801 IGKV1-16P04430 117 aa13.15□□□□□ -0.31
ATP2C1-224ENST00000533801 JPT1Q9UK76 154 aa13.15□□□□□ -0.31
ATP2C1-224ENST00000533801 HPRT1P00492 218 aa13.14□□□□□ -0.31
ATP2C1-224ENST00000533801 GRNP28799 593 aaKnown RBP13.14□□□□□ -0.31
ATP2C1-224ENST00000533801 HABP2Q14520 560 aaPredicted RBP13.14□□□□□ -0.31
ATP2C1-224ENST00000533801 ADIPOQQ15848 244 aa13.14□□□□□ -0.31
ATP2C1-224ENST00000533801 RBMS3Q6XE24 437 aaKnown RBP13.14□□□□□ -0.31
ATP2C1-224ENST00000533801 Q8NA96 180 aa13.14□□□□□ -0.31
ATP2C1-224ENST00000533801 RAXQ9Y2V3 346 aa13.14□□□□□ -0.31
ATP2C1-224ENST00000533801 HIVEP3Q5T1R4 2406 aa13.14□□□□□ -0.31
ATP2C1-224ENST00000533801 PLAUP00749 431 aa13.14□□□□□ -0.31
ATP2C1-224ENST00000533801 FABP9Q0Z7S8 132 aa13.14□□□□□ -0.31
ATP2C1-224ENST00000533801 TBR1Q16650 682 aa13.14□□□□□ -0.31
ATP2C1-224ENST00000533801 WDR25Q64LD2 544 aaPredicted RBP13.14□□□□□ -0.31
ATP2C1-224ENST00000533801 LYPD2Q6UXB3 125 aa13.14□□□□□ -0.31
ATP2C1-224ENST00000533801 TMEM14EPQ6UXP3 125 aa13.14□□□□□ -0.31
ATP2C1-224ENST00000533801 SLC16A13Q7RTY0 426 aa13.14□□□□□ -0.31
ATP2C1-224ENST00000533801 MOB3BQ86TA1 216 aa13.14□□□□□ -0.31
ATP2C1-224ENST00000533801 C12orf57Q99622 126 aa13.14□□□□□ -0.31
ATP2C1-224ENST00000533801 NPCDR1Q9BY65 106 aa13.14□□□□□ -0.31
ATP2C1-224ENST00000533801 KBTBD11-OT1A0A1B0GTJ5 212 aa13.14□□□□□ -0.31
ATP2C1-224ENST00000533801 CD1BP29016 333 aa13.14□□□□□ -0.31
ATP2C1-224ENST00000533801 LOXL3P58215 753 aa13.14□□□□□ -0.31
ATP2C1-224ENST00000533801 RHEBQ15382 184 aa13.14□□□□□ -0.31
ATP2C1-224ENST00000533801 OR51G1Q8NGK1 321 aa13.14□□□□□ -0.31
ATP2C1-224ENST00000533801 OR10X1Q8NGY0 326 aa13.14□□□□□ -0.31
ATP2C1-224ENST00000533801 CSMD1Q96PZ7 3565 aa13.13□□□□□ -0.31
ATP2C1-224ENST00000533801 LOC102723971A0A1B0GUV8 181 aa13.13□□□□□ -0.31
ATP2C1-224ENST00000533801 NKX6-3A6NJ46 265 aa13.13□□□□□ -0.31
ATP2C1-224ENST00000533801 IFNA1P01562 189 aa13.13□□□□□ -0.31
ATP2C1-224ENST00000533801 MT-ND4LP03901 98 aa13.13□□□□□ -0.31
ATP2C1-224ENST00000533801 GATA2P23769 480 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms