RNA–Protein interactions for RNA: ENST00000526058.1

CCS-203, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 4

Gene CCS, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-203ENST00000526058 TCTEX1D2Q8WW35 142 aa13.15□□□□□ -0.3
CCS-203ENST00000526058 HSD17B10Q99714 261 aaKnown RBP13.15□□□□□ -0.3
CCS-203ENST00000526058 SLA2Q9H6Q3 261 aa13.15□□□□□ -0.3
CCS-203ENST00000526058 IFT46Q9NQC8 304 aa13.15□□□□□ -0.3
CCS-203ENST00000526058 ZNF355PQ9NSJ1 428 aa13.15□□□□□ -0.3
CCS-203ENST00000526058 MRPS7Q9Y2R9 242 aaKnown RBP13.15□□□□□ -0.3
CCS-203ENST00000526058 IGHV4OR15-8A0A075B7B6 117 aa13.14□□□□□ -0.31
CCS-203ENST00000526058 A0A087WW49 117 aa13.14□□□□□ -0.31
CCS-203ENST00000526058 MSGN1A6NI15 193 aa13.14□□□□□ -0.31
CCS-203ENST00000526058 SLURP1P55000 103 aa13.14□□□□□ -0.31
CCS-203ENST00000526058 FXYD4P59646 89 aa13.14□□□□□ -0.31
CCS-203ENST00000526058 CDK10Q15131 360 aa13.14□□□□□ -0.31
CCS-203ENST00000526058 CTF1Q16619 201 aa13.14□□□□□ -0.31
CCS-203ENST00000526058 C9orf66Q5T8R8 295 aa13.14□□□□□ -0.31
CCS-203ENST00000526058 ZNF66Q6ZN08 573 aa13.14□□□□□ -0.31
CCS-203ENST00000526058 ANKRD13BQ86YJ7 626 aa13.14□□□□□ -0.31
CCS-203ENST00000526058 ACOT12Q8WYK0 555 aa13.14□□□□□ -0.31
CCS-203ENST00000526058 DCUN1D4Q92564 292 aa13.14□□□□□ -0.31
CCS-203ENST00000526058 RHOVQ96L33 236 aa13.14□□□□□ -0.31
CCS-203ENST00000526058 ZNF430Q9H8G1 570 aaPredicted RBP13.14□□□□□ -0.31
CCS-203ENST00000526058 SCOCQ9UIL1 159 aa13.14□□□□□ -0.31
CCS-203ENST00000526058 ANAPC10Q9UM13 185 aa13.14□□□□□ -0.31
CCS-203ENST00000526058 LINC01619G3V211 115 aa13.13□□□□□ -0.31
CCS-203ENST00000526058 RFX2P48378 723 aa13.13□□□□□ -0.31
CCS-203ENST00000526058 DEFB121Q5J5C9 76 aa13.13□□□□□ -0.31
CCS-203ENST00000526058 GIMAP1Q8WWP7 306 aa13.13□□□□□ -0.31
CCS-203ENST00000526058 SRSF12Q8WXF0 261 aaKnown RBP13.13□□□□□ -0.31
CCS-203ENST00000526058 DLX4Q92988 240 aaPredicted RBP13.13□□□□□ -0.31
CCS-203ENST00000526058 TMEM68Q96MH6 324 aa13.13□□□□□ -0.31
CCS-203ENST00000526058 PHB2Q99623 299 aa13.13□□□□□ -0.31
CCS-203ENST00000526058 SLC5A7Q9GZV3 580 aa13.13□□□□□ -0.31
CCS-203ENST00000526058 HPGDSO60760 199 aa13.12□□□□□ -0.31
CCS-203ENST00000526058 GABARAPO95166 117 aa13.12□□□□□ -0.31
CCS-203ENST00000526058 PMP2P02689 132 aa13.12□□□□□ -0.31
CCS-203ENST00000526058 ELK1P19419 428 aa13.12□□□□□ -0.31
CCS-203ENST00000526058 PRSS3P35030 304 aa13.12□□□□□ -0.31
CCS-203ENST00000526058 RORCP51449 518 aa13.12□□□□□ -0.31
CCS-203ENST00000526058 DGCR2P98153 550 aa13.12□□□□□ -0.31
CCS-203ENST00000526058 DEFA5Q01523 94 aa13.12□□□□□ -0.31
CCS-203ENST00000526058 C10orf55Q5SWW7 151 aa13.12□□□□□ -0.31
CCS-203ENST00000526058 GPR107Q5VW38 600 aa13.12□□□□□ -0.31
CCS-203ENST00000526058 TMEM17Q86X19 198 aa13.12□□□□□ -0.31
CCS-203ENST00000526058 OR4S2Q8NH73 311 aa13.12□□□□□ -0.31
CCS-203ENST00000526058 EHFQ9NZC4 300 aa13.12□□□□□ -0.31
CCS-203ENST00000526058 H3BUA1 57 aa13.11□□□□□ -0.31
CCS-203ENST00000526058 OVOL1O14753 267 aa13.11□□□□□ -0.31
CCS-203ENST00000526058 RAMP3O60896 148 aa13.11□□□□□ -0.31
CCS-203ENST00000526058 APOA1P02647 267 aa13.11□□□□□ -0.31
CCS-203ENST00000526058 HSPB1P04792 205 aaKnown RBP13.11□□□□□ -0.31
CCS-203ENST00000526058 NAT1P18440 290 aa13.11□□□□□ -0.31
CCS-203ENST00000526058 MSMO1Q15800 293 aa13.11□□□□□ -0.31
CCS-203ENST00000526058 ZNF818PQ6ZRF7 136 aa13.11□□□□□ -0.31
CCS-203ENST00000526058 MMD2Q8IY49 270 aa13.11□□□□□ -0.31
CCS-203ENST00000526058 ZBTB34Q8NCN2 500 aa13.11□□□□□ -0.31
CCS-203ENST00000526058 CMTM3Q96MX0 182 aa13.11□□□□□ -0.31
CCS-203ENST00000526058 MRPS26Q9BYN8 205 aaKnown RBP13.11□□□□□ -0.31
CCS-203ENST00000526058 TINAGL1Q9GZM7 467 aaPredicted RBP13.11□□□□□ -0.31
CCS-203ENST00000526058 COA4Q9NYJ1 87 aa13.11□□□□□ -0.31
CCS-203ENST00000526058 SORL1Q92673 2214 aa13.11□□□□□ -0.31
CCS-203ENST00000526058 C13orf42A0A1B0GVH6 325 aa13.1□□□□□ -0.31
CCS-203ENST00000526058 SMIM31A0A1B0GVY4 71 aa13.1□□□□□ -0.31
CCS-203ENST00000526058 SULT1C2O00338 296 aa13.1□□□□□ -0.31
CCS-203ENST00000526058 RBMXL2O75526 392 aaKnown RBP13.1□□□□□ -0.31
CCS-203ENST00000526058 DYRK1AQ13627 763 aa13.1□□□□□ -0.31
CCS-203ENST00000526058 DHRS11Q6UWP2 260 aa13.1□□□□□ -0.31
CCS-203ENST00000526058 SSX9Q7RTT3 188 aa13.1□□□□□ -0.31
CCS-203ENST00000526058 SNX29P2Q8IUI4 249 aa13.1□□□□□ -0.31
CCS-203ENST00000526058 LYSMD2Q8IV50 215 aa13.1□□□□□ -0.31
CCS-203ENST00000526058 PUSL1Q8N0Z8 303 aaKnown RBP13.1□□□□□ -0.31
CCS-203ENST00000526058 GPX8Q8TED1 209 aa13.1□□□□□ -0.31
CCS-203ENST00000526058 ZNF2Q9BSG1 426 aaPredicted RBP13.1□□□□□ -0.31
CCS-203ENST00000526058 MPPED1O15442 326 aa13.09□□□□□ -0.31
CCS-203ENST00000526058 CREBL2O60519 120 aaPredicted RBP13.09□□□□□ -0.31
CCS-203ENST00000526058 ACTL6BO94805 426 aa13.09□□□□□ -0.31
CCS-203ENST00000526058 KBTBD11O94819 623 aa13.09□□□□□ -0.31
CCS-203ENST00000526058 OR2A4O95047 310 aa13.09□□□□□ -0.31
CCS-203ENST00000526058 BRI3O95415 125 aa13.09□□□□□ -0.31
CCS-203ENST00000526058 HLA-DMAP28067 261 aa13.09□□□□□ -0.31
CCS-203ENST00000526058 GNRHRP30968 328 aa13.09□□□□□ -0.31
CCS-203ENST00000526058 ECI1P42126 302 aa13.09□□□□□ -0.31
CCS-203ENST00000526058 KIR2DS2P43631 304 aa13.09□□□□□ -0.31
CCS-203ENST00000526058 ALDH3B2P48448 385 aa13.09□□□□□ -0.31
CCS-203ENST00000526058 HERV-K104P61576 105 aa13.09□□□□□ -0.31
CCS-203ENST00000526058 SPAG16Q8N0X2 631 aa13.09□□□□□ -0.31
CCS-203ENST00000526058 ADAD2Q8NCV1 583 aaKnown RBP13.09□□□□□ -0.31
CCS-203ENST00000526058 OR5H2Q8NGV7 314 aa13.09□□□□□ -0.31
CCS-203ENST00000526058 OR2A7Q96R45 310 aa13.09□□□□□ -0.31
CCS-203ENST00000526058 PRR25Q96S07 402 aa13.09□□□□□ -0.31
CCS-203ENST00000526058 ZMAT5Q9UDW3 170 aaKnown RBP13.09□□□□□ -0.31
CCS-203ENST00000526058 A0A0G2JLM5 398 aa13.08□□□□□ -0.32
CCS-203ENST00000526058 ANKRD34BA5PLL1 514 aa13.08□□□□□ -0.32
CCS-203ENST00000526058 E7EUB6 86 aa13.08□□□□□ -0.32
CCS-203ENST00000526058 PRH1P02810 166 aa13.08□□□□□ -0.32
CCS-203ENST00000526058 OR9G9P0C7N8 305 aa13.08□□□□□ -0.32
CCS-203ENST00000526058 HRH1P35367 487 aa13.08□□□□□ -0.32
CCS-203ENST00000526058 TAS2R46P59540 309 aa13.08□□□□□ -0.32
CCS-203ENST00000526058 GPR141Q7Z602 305 aa13.08□□□□□ -0.32
CCS-203ENST00000526058 VSTM2AQ8TAG5 236 aa13.08□□□□□ -0.32
CCS-203ENST00000526058 TMEM167AQ8TBQ9 72 aa13.08□□□□□ -0.32
CCS-203ENST00000526058 MOB3AQ96BX8 217 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms