RNA–Protein interactions for RNA: ENST00000525348.1

CD44-217, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-217ENST00000525348 LINC00471Q8N535 108 aa2.59□□□□□ -1.99
CD44-217ENST00000525348 ZNF433Q8N7K0 673 aaPredicted RBP2.59□□□□□ -1.99
CD44-217ENST00000525348 OR5A2Q8NGI9 324 aa2.59□□□□□ -1.99
CD44-217ENST00000525348 OR4C13Q8NGP0 309 aa2.59□□□□□ -1.99
CD44-217ENST00000525348 OR1S2Q8NGQ3 325 aa2.59□□□□□ -1.99
CD44-217ENST00000525348 OR13C6PQ8NH95 151 aa2.59□□□□□ -1.99
CD44-217ENST00000525348 NEIL3Q8TAT5 605 aa2.59□□□□□ -1.99
CD44-217ENST00000525348 EEF1AKMT1Q8WVE0 214 aa2.59□□□□□ -1.99
CD44-217ENST00000525348 UPRTQ96BW1 309 aa2.59□□□□□ -1.99
CD44-217ENST00000525348 IMP4Q96G21 291 aaKnown RBP2.59□□□□□ -1.99
CD44-217ENST00000525348 TMEM101Q96IK0 257 aa2.59□□□□□ -1.99
CD44-217ENST00000525348 HPDLQ96IR7 371 aa2.59□□□□□ -1.99
CD44-217ENST00000525348 IMMP1LQ96LU5 166 aa2.59□□□□□ -1.99
CD44-217ENST00000525348 TSPAN32Q96QS1 320 aa2.59□□□□□ -1.99
CD44-217ENST00000525348 LYSMD1Q96S90 227 aa2.59□□□□□ -1.99
CD44-217ENST00000525348 DOHHQ9BU89 302 aa2.59□□□□□ -1.99
CD44-217ENST00000525348 TM2D1Q9BX74 207 aa2.59□□□□□ -1.99
CD44-217ENST00000525348 DEFB129Q9H1M3 183 aa2.59□□□□□ -1.99
CD44-217ENST00000525348 MED28Q9H204 178 aa2.59□□□□□ -1.99
CD44-217ENST00000525348 OR51I1Q9H343 314 aa2.59□□□□□ -1.99
CD44-217ENST00000525348 RNF167Q9H6Y7 350 aa2.59□□□□□ -1.99
CD44-217ENST00000525348 NOX3Q9HBY0 568 aa2.59□□□□□ -1.99
CD44-217ENST00000525348 CA10Q9NS85 328 aa2.59□□□□□ -1.99
CD44-217ENST00000525348 UQCC1Q9NVA1 299 aa2.59□□□□□ -1.99
CD44-217ENST00000525348 ZNF226Q9NYT6 803 aa2.59□□□□□ -1.99
CD44-217ENST00000525348 TP53TG1Q9Y2A0 90 aa2.59□□□□□ -1.99
CD44-217ENST00000525348 FAM208AQ9UK61 1670 aaKnown RBP2.59□□□□□ -2
CD44-217ENST00000525348 NACAE9PAV3 2078 aa2.59□□□□□ -2
CD44-217ENST00000525348 RBBP6Q7Z6E9 1792 aaKnown RBP2.59□□□□□ -2
CD44-217ENST00000525348 DOCK5Q9H7D0 1870 aa2.58□□□□□ -2
CD44-217ENST00000525348 ADGRB1O14514 1584 aa2.58□□□□□ -2
CD44-217ENST00000525348 TRAV36DV7A0A075B6V5 113 aa2.58□□□□□ -2
CD44-217ENST00000525348 TCRBV3S1A0A5B6 114 aa2.58□□□□□ -2
CD44-217ENST00000525348 DHRS12A0PJE2 317 aa2.58□□□□□ -2
CD44-217ENST00000525348 ZNF705GA8MUZ8 300 aaPredicted RBP2.58□□□□□ -2
CD44-217ENST00000525348 IDSB3KWA1 339 aa2.58□□□□□ -2
CD44-217ENST00000525348 INMT-MINDY4F8WBC2 141 aa2.58□□□□□ -2
CD44-217ENST00000525348 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.58□□□□□ -2
CD44-217ENST00000525348 CLDN5O00501 218 aa2.58□□□□□ -2
CD44-217ENST00000525348 EFNA2O43921 213 aa2.58□□□□□ -2
CD44-217ENST00000525348 YPEL1O60688 119 aa2.58□□□□□ -2
CD44-217ENST00000525348 SERF1AO75920 110 aa2.58□□□□□ -2
CD44-217ENST00000525348 OR7C1O76099 320 aaPredicted RBP2.58□□□□□ -2
CD44-217ENST00000525348 CDRT1O95170 752 aa2.58□□□□□ -2
CD44-217ENST00000525348 SLC35G6P0C7Q6 338 aa2.58□□□□□ -2
CD44-217ENST00000525348 ZNF728P0DKX0 622 aa2.58□□□□□ -2
CD44-217ENST00000525348 OR12D1P0DN82 309 aa2.58□□□□□ -2
CD44-217ENST00000525348 ZNF32P17041 273 aa2.58□□□□□ -2
CD44-217ENST00000525348 TCN2P20062 427 aa2.58□□□□□ -2
CD44-217ENST00000525348 CD1CP29017 333 aa2.58□□□□□ -2
CD44-217ENST00000525348 RPL12P30050 165 aaKnown RBP2.58□□□□□ -2
CD44-217ENST00000525348 GABRA3P34903 492 aa2.58□□□□□ -2
CD44-217ENST00000525348 HRH1P35367 487 aa2.58□□□□□ -2
CD44-217ENST00000525348 RPL4P36578 427 aaKnown RBP2.58□□□□□ -2
CD44-217ENST00000525348 REG1BP48304 166 aa2.58□□□□□ -2
CD44-217ENST00000525348 GZMMP51124 257 aa2.58□□□□□ -2
CD44-217ENST00000525348 ZNF83P51522 516 aa2.58□□□□□ -2
CD44-217ENST00000525348 NDUFA8P51970 172 aa2.58□□□□□ -2
CD44-217ENST00000525348 ZNF140P52738 457 aaPredicted RBP2.58□□□□□ -2
CD44-217ENST00000525348 CRISP3P54108 245 aa2.58□□□□□ -2
CD44-217ENST00000525348 RPS25P62851 125 aaKnown RBP2.58□□□□□ -2
CD44-217ENST00000525348 ARG2P78540 354 aa2.58□□□□□ -2
CD44-217ENST00000525348 MEF2BQ02080 365 aaPredicted RBP2.58□□□□□ -2
CD44-217ENST00000525348 FMODQ06828 376 aa2.58□□□□□ -2
CD44-217ENST00000525348 BCL2L1Q07817 233 aa2.58□□□□□ -2
CD44-217ENST00000525348 GTF3C1Q12789 2109 aa2.58□□□□□ -2
CD44-217ENST00000525348 PSG7Q13046 419 aa2.58□□□□□ -2
CD44-217ENST00000525348 MMDQ15546 238 aa2.58□□□□□ -2
CD44-217ENST00000525348 SNRNP35Q16560 246 aaKnown RBP2.58□□□□□ -2
CD44-217ENST00000525348 IQCJQ1A5X6 159 aa2.58□□□□□ -2
CD44-217ENST00000525348 IAH1Q2TAA2 248 aaPredicted RBP2.58□□□□□ -2
CD44-217ENST00000525348 TRMT12Q53H54 448 aaKnown RBP2.58□□□□□ -2
CD44-217ENST00000525348 ZFAND6Q6FIF0 208 aa2.58□□□□□ -2
CD44-217ENST00000525348 EIF5AL1Q6IS14 154 aaKnown RBP2.58□□□□□ -2
CD44-217ENST00000525348 TBPL2Q6SJ96 375 aa2.58□□□□□ -2
CD44-217ENST00000525348 OPN5Q6U736 354 aa2.58□□□□□ -2
CD44-217ENST00000525348 GLIPR1L1Q6UWM5 242 aa2.58□□□□□ -2
CD44-217ENST00000525348 TEX43Q6ZNM6 134 aa2.58□□□□□ -2
CD44-217ENST00000525348 KRTAP5-2Q701N4 177 aa2.58□□□□□ -2
CD44-217ENST00000525348 ZNF547Q8IVP9 402 aa2.58□□□□□ -2
CD44-217ENST00000525348 OR2L13Q8N349 312 aa2.58□□□□□ -2
CD44-217ENST00000525348 FTMTQ8N4E7 242 aa2.58□□□□□ -2
CD44-217ENST00000525348 C14orf178Q8N769 122 aaPredicted RBP2.58□□□□□ -2
CD44-217ENST00000525348 OR8G5Q8NG78 346 aa2.58□□□□□ -2
CD44-217ENST00000525348 OR11G2Q8NGC1 345 aa2.58□□□□□ -2
CD44-217ENST00000525348 OR5B3Q8NH48 314 aa2.58□□□□□ -2
CD44-217ENST00000525348 DOK4Q8TEW6 326 aa2.58□□□□□ -2
CD44-217ENST00000525348 FRZBQ92765 325 aa2.58□□□□□ -2
CD44-217ENST00000525348 TMEM106AQ96A25 262 aa2.58□□□□□ -2
CD44-217ENST00000525348 SLC25A38Q96DW6 304 aa2.58□□□□□ -2
CD44-217ENST00000525348 DNAJA3Q96EY1 480 aa2.58□□□□□ -2
CD44-217ENST00000525348 ADTRPQ96IZ2 230 aa2.58□□□□□ -2
CD44-217ENST00000525348 IP6K3Q96PC2 410 aa2.58□□□□□ -2
CD44-217ENST00000525348 YPEL2Q96QA6 119 aa2.58□□□□□ -2
CD44-217ENST00000525348 HSPB9Q9BQS6 159 aa2.58□□□□□ -2
CD44-217ENST00000525348 NAA38Q9BRA0 125 aaKnown RBP2.58□□□□□ -2
CD44-217ENST00000525348 APOOQ9BUR5 198 aa2.58□□□□□ -2
CD44-217ENST00000525348 SMIM3Q9BZL3 60 aa2.58□□□□□ -2
CD44-217ENST00000525348 PRORYQ9H606 182 aa2.58□□□□□ -2
CD44-217ENST00000525348 ENY2Q9NPA8 101 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms