RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 ZFAND1Q8TCF1 268 aa4.26□□□□□ -1.73
HMGB1P40-201ENST00000525121 DDB2Q92466 427 aa4.26□□□□□ -1.73
HMGB1P40-201ENST00000525121 R3HDM4Q96D70 268 aa4.26□□□□□ -1.73
HMGB1P40-201ENST00000525121 C5orf30Q96GV9 206 aa4.26□□□□□ -1.73
HMGB1P40-201ENST00000525121 RITA1Q96K30 269 aa4.26□□□□□ -1.73
HMGB1P40-201ENST00000525121 NXF2Q9GZY0 626 aaKnown RBP4.26□□□□□ -1.73
HMGB1P40-201ENST00000525121 FXYD6Q9H0Q3 95 aa4.26□□□□□ -1.73
HMGB1P40-201ENST00000525121 RBM38Q9H0Z9 239 aaKnown RBP4.26□□□□□ -1.73
HMGB1P40-201ENST00000525121 HRASLSQ9HDD0 168 aa4.26□□□□□ -1.73
HMGB1P40-201ENST00000525121 ZFP57Q9NU63 452 aa4.26□□□□□ -1.73
HMGB1P40-201ENST00000525121 COMMD9Q9P000 198 aa4.26□□□□□ -1.73
HMGB1P40-201ENST00000525121 KLK11Q9UBX7 282 aa4.26□□□□□ -1.73
HMGB1P40-201ENST00000525121 LINC00527Q9UJ94 153 aa4.26□□□□□ -1.73
HMGB1P40-201ENST00000525121 C14orf166Q9Y224 244 aaKnown RBP4.26□□□□□ -1.73
HMGB1P40-201ENST00000525121 WSB1Q9Y6I7 421 aa4.26□□□□□ -1.73
HMGB1P40-201ENST00000525121 A0A1W2PN81 502 aa4.25□□□□□ -1.73
HMGB1P40-201ENST00000525121 DPPA5A6NC42 116 aa4.25□□□□□ -1.73
HMGB1P40-201ENST00000525121 CYB5BO43169 146 aa4.25□□□□□ -1.73
HMGB1P40-201ENST00000525121 GSTZ1O43708 216 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P40-201ENST00000525121 SNAPC5O75971 98 aa4.25□□□□□ -1.73
HMGB1P40-201ENST00000525121 ATG12O94817 140 aa4.25□□□□□ -1.73
HMGB1P40-201ENST00000525121 OR2A4O95047 310 aa4.25□□□□□ -1.73
HMGB1P40-201ENST00000525121 TSPAN15O95858 294 aa4.25□□□□□ -1.73
HMGB1P40-201ENST00000525121 HPRT1P00492 218 aa4.25□□□□□ -1.73
HMGB1P40-201ENST00000525121 IGLV2-14P01704 120 aa4.25□□□□□ -1.73
HMGB1P40-201ENST00000525121 SERPINE2P07093 398 aa4.25□□□□□ -1.73
HMGB1P40-201ENST00000525121 SAA1P0DJI8 122 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P40-201ENST00000525121 NQO2P16083 231 aa4.25□□□□□ -1.73
HMGB1P40-201ENST00000525121 GNRHRP30968 328 aa4.25□□□□□ -1.73
HMGB1P40-201ENST00000525121 MAS1LP35410 378 aa4.25□□□□□ -1.73
HMGB1P40-201ENST00000525121 CHRNA7P36544 502 aa4.25□□□□□ -1.73
HMGB1P40-201ENST00000525121 PPP5CP53041 499 aa4.25□□□□□ -1.73
HMGB1P40-201ENST00000525121 UCP3P55916 312 aa4.25□□□□□ -1.73
HMGB1P40-201ENST00000525121 TAS2R31P59538 309 aa4.25□□□□□ -1.73
HMGB1P40-201ENST00000525121 RPL23AP62750 156 aaKnown RBP4.25□□□□□ -1.73
HMGB1P40-201ENST00000525121 RPL30P62888 115 aaKnown RBP4.25□□□□□ -1.73
HMGB1P40-201ENST00000525121 CD83Q01151 205 aa4.25□□□□□ -1.73
HMGB1P40-201ENST00000525121 PRSS8Q16651 343 aa4.25□□□□□ -1.73
HMGB1P40-201ENST00000525121 PHLDA2Q53GA4 152 aa4.25□□□□□ -1.73
HMGB1P40-201ENST00000525121 AKIRIN2Q53H80 203 aa4.25□□□□□ -1.73
HMGB1P40-201ENST00000525121 TRIQKQ629K1 86 aa4.25□□□□□ -1.73
HMGB1P40-201ENST00000525121 IDO2Q6ZQW0 420 aa4.25□□□□□ -1.73
HMGB1P40-201ENST00000525121 SSX9Q7RTT3 188 aa4.25□□□□□ -1.73
HMGB1P40-201ENST00000525121 SLC25A42Q86VD7 318 aa4.25□□□□□ -1.73
HMGB1P40-201ENST00000525121 LYSMD2Q8IV50 215 aa4.25□□□□□ -1.73
HMGB1P40-201ENST00000525121 ZNF695Q8IW36 515 aa4.25□□□□□ -1.73
HMGB1P40-201ENST00000525121 MRPL41Q8IXM3 137 aaKnown RBP4.25□□□□□ -1.73
HMGB1P40-201ENST00000525121 Q8N402 240 aa4.25□□□□□ -1.73
HMGB1P40-201ENST00000525121 KLHL30-AS1Q8NEE0 82 aa4.25□□□□□ -1.73
HMGB1P40-201ENST00000525121 OR5M8Q8NGP6 311 aa4.25□□□□□ -1.73
HMGB1P40-201ENST00000525121 OR4A5Q8NH83 315 aa4.25□□□□□ -1.73
HMGB1P40-201ENST00000525121 WIPF2Q8TF74 440 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P40-201ENST00000525121 RBMXL1Q96E39 390 aaKnown RBP4.25□□□□□ -1.73
HMGB1P40-201ENST00000525121 ZNF486Q96H40 463 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P40-201ENST00000525121 RHOVQ96L33 236 aa4.25□□□□□ -1.73
HMGB1P40-201ENST00000525121 TMEM68Q96MH6 324 aa4.25□□□□□ -1.73
HMGB1P40-201ENST00000525121 SCGB3A2Q96PL1 93 aa4.25□□□□□ -1.73
HMGB1P40-201ENST00000525121 OR2A7Q96R45 310 aa4.25□□□□□ -1.73
HMGB1P40-201ENST00000525121 SPIN2AQ99865 258 aa4.25□□□□□ -1.73
HMGB1P40-201ENST00000525121 PRRT1Q99946 306 aa4.25□□□□□ -1.73
HMGB1P40-201ENST00000525121 SPIN2BQ9BPZ2 258 aa4.25□□□□□ -1.73
HMGB1P40-201ENST00000525121 TINAGL1Q9GZM7 467 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P40-201ENST00000525121 PLEKHA2Q9HB19 425 aa4.25□□□□□ -1.73
HMGB1P40-201ENST00000525121 TPSG1Q9NRR2 321 aa4.25□□□□□ -1.73
HMGB1P40-201ENST00000525121 ZNF355PQ9NSJ1 428 aa4.25□□□□□ -1.73
HMGB1P40-201ENST00000525121 MCUBQ9NWR8 336 aa4.25□□□□□ -1.73
HMGB1P40-201ENST00000525121 COPZ2Q9P299 210 aa4.25□□□□□ -1.73
HMGB1P40-201ENST00000525121 SCP2D1Q9UJQ7 156 aa4.25□□□□□ -1.73
HMGB1P40-201ENST00000525121 STAB1Q9NY15 2570 aa4.25□□□□□ -1.73
HMGB1P40-201ENST00000525121 PIGBOS1A0A0B4J2F0 54 aa4.24□□□□□ -1.73
HMGB1P40-201ENST00000525121 TEX13DA0A0J9YY54 714 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P40-201ENST00000525121 ANKRD20A5PA0PJZ0 165 aa4.24□□□□□ -1.73
HMGB1P40-201ENST00000525121 LINC01548A6NM66 108 aa4.24□□□□□ -1.73
HMGB1P40-201ENST00000525121 G3V318 75 aa4.24□□□□□ -1.73
HMGB1P40-201ENST00000525121 H3BUA1 57 aa4.24□□□□□ -1.73
HMGB1P40-201ENST00000525121 FCN1O00602 326 aa4.24□□□□□ -1.73
HMGB1P40-201ENST00000525121 RAMP3O60896 148 aa4.24□□□□□ -1.73
HMGB1P40-201ENST00000525121 PGLYRP1O75594 196 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P40-201ENST00000525121 B3GALNT1O75752 331 aa4.24□□□□□ -1.73
HMGB1P40-201ENST00000525121 KBTBD11O94819 623 aa4.24□□□□□ -1.73
HMGB1P40-201ENST00000525121 DHFRP00374 187 aa4.24□□□□□ -1.73
HMGB1P40-201ENST00000525121 IGLV2-23P01705 113 aa4.24□□□□□ -1.73
HMGB1P40-201ENST00000525121 CD74P04233 296 aa4.24□□□□□ -1.73
HMGB1P40-201ENST00000525121 RPLP1P05386 114 aaKnown RBP4.24□□□□□ -1.73
HMGB1P40-201ENST00000525121 CD33P20138 364 aa4.24□□□□□ -1.73
HMGB1P40-201ENST00000525121 F2RP25116 425 aa4.24□□□□□ -1.73
HMGB1P40-201ENST00000525121 PSMB8P28062 276 aa4.24□□□□□ -1.73
HMGB1P40-201ENST00000525121 RPL27AP46776 148 aaKnown RBP4.24□□□□□ -1.73
HMGB1P40-201ENST00000525121 CRIP2P52943 208 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P40-201ENST00000525121 PIGPP57054 158 aa4.24□□□□□ -1.73
HMGB1P40-201ENST00000525121 TPPP2P59282 170 aa4.24□□□□□ -1.73
HMGB1P40-201ENST00000525121 RPL8P62917 257 aaKnown RBP4.24□□□□□ -1.73
HMGB1P40-201ENST00000525121 NDPQ00604 133 aa4.24□□□□□ -1.73
HMGB1P40-201ENST00000525121 EIF4EBP1Q13541 118 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P40-201ENST00000525121 SURF2Q15527 256 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P40-201ENST00000525121 TRIM16LQ309B1 348 aa4.24□□□□□ -1.73
HMGB1P40-201ENST00000525121 ZNF57Q68EA5 555 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P40-201ENST00000525121 C10orf99Q6UWK7 81 aa4.24□□□□□ -1.73
HMGB1P40-201ENST00000525121 TBC1D26Q86UD7 250 aa4.24□□□□□ -1.73
HMGB1P40-201ENST00000525121 TOMM5Q8N4H5 51 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms