RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 TMEM164Q5U3C3 297 aa13.76□□□□□ -0.21
PCDHGA11-202ENST00000518882 KCNIP4Q6PIL6 250 aa13.76□□□□□ -0.21
PCDHGA11-202ENST00000518882 TMPRSS7Q7RTY8 843 aa13.76□□□□□ -0.21
PCDHGA11-202ENST00000518882 TMEM144Q7Z5S9 345 aa13.76□□□□□ -0.21
PCDHGA11-202ENST00000518882 ARRDC1-AS1Q9H2J1 176 aa13.76□□□□□ -0.21
PCDHGA11-202ENST00000518882 MSL2Q9HCI7 577 aa13.76□□□□□ -0.21
PCDHGA11-202ENST00000518882 TRBV20OR9-2A0A075B6H5 130 aa13.76□□□□□ -0.21
PCDHGA11-202ENST00000518882 RBFOX2O43251 390 aaKnown RBP eCLIP13.76□□□□□ -0.21
PCDHGA11-202ENST00000518882 PDE6DO43924 150 aa13.76□□□□□ -0.21
PCDHGA11-202ENST00000518882 CNN1P51911 297 aaKnown RBP13.76□□□□□ -0.21
PCDHGA11-202ENST00000518882 VKORC1L1Q8N0U8 176 aa13.76□□□□□ -0.21
PCDHGA11-202ENST00000518882 LURAP1Q96LR2 239 aa13.76□□□□□ -0.21
PCDHGA11-202ENST00000518882 TMEM204Q9BSN7 226 aa13.76□□□□□ -0.21
PCDHGA11-202ENST00000518882 CXXC4Q9H2H0 198 aa13.76□□□□□ -0.21
PCDHGA11-202ENST00000518882 FCGR3BO75015 233 aa13.75□□□□□ -0.21
PCDHGA11-202ENST00000518882 OR4A8P0C604 315 aa13.75□□□□□ -0.21
PCDHGA11-202ENST00000518882 COL8A2P25067 703 aa13.75□□□□□ -0.21
PCDHGA11-202ENST00000518882 DUTP33316 252 aaKnown RBP13.75□□□□□ -0.21
PCDHGA11-202ENST00000518882 LCN2P80188 198 aa13.75□□□□□ -0.21
PCDHGA11-202ENST00000518882 CD177Q8N6Q3 437 aa13.75□□□□□ -0.21
PCDHGA11-202ENST00000518882 TMEM18Q96B42 140 aa13.75□□□□□ -0.21
PCDHGA11-202ENST00000518882 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.75□□□□□ -0.21
PCDHGA11-202ENST00000518882 LNP1A1A4G5 178 aa13.75□□□□□ -0.21
PCDHGA11-202ENST00000518882 RRHO14718 337 aa13.75□□□□□ -0.21
PCDHGA11-202ENST00000518882 TAS2R60P59551 318 aa13.75□□□□□ -0.21
PCDHGA11-202ENST00000518882 SSTP61278 116 aa13.75□□□□□ -0.21
PCDHGA11-202ENST00000518882 EDDM3AQ14507 147 aa13.75□□□□□ -0.21
PCDHGA11-202ENST00000518882 INO80CQ6PI98 192 aaPredicted RBP13.75□□□□□ -0.21
PCDHGA11-202ENST00000518882 TREML4Q6UXN2 200 aa13.75□□□□□ -0.21
PCDHGA11-202ENST00000518882 GBGT1Q8N5D6 347 aa13.75□□□□□ -0.21
PCDHGA11-202ENST00000518882 RAB1CQ92928 201 aa13.75□□□□□ -0.21
PCDHGA11-202ENST00000518882 NOL4LQ96MY1 436 aaPredicted RBP13.75□□□□□ -0.21
PCDHGA11-202ENST00000518882 FAM234AQ9H0X4 552 aa13.75□□□□□ -0.21
PCDHGA11-202ENST00000518882 ZDHHC11Q9H8X9 412 aa13.75□□□□□ -0.21
PCDHGA11-202ENST00000518882 KCNIP2Q9NS61 270 aa13.75□□□□□ -0.21
PCDHGA11-202ENST00000518882 A0A0U1RQK1 487 aa13.74□□□□□ -0.21
PCDHGA11-202ENST00000518882 A0A1W2PPV4 95 aa13.74□□□□□ -0.21
PCDHGA11-202ENST00000518882 ZNF320A2RRD8 509 aa13.74□□□□□ -0.21
PCDHGA11-202ENST00000518882 ARL14EPLP0DKL9 152 aa13.74□□□□□ -0.21
PCDHGA11-202ENST00000518882 CD99P14209 185 aa13.74□□□□□ -0.21
PCDHGA11-202ENST00000518882 MRPL41Q8IXM3 137 aaKnown RBP13.74□□□□□ -0.21
PCDHGA11-202ENST00000518882 SDSLQ96GA7 329 aa13.74□□□□□ -0.21
PCDHGA11-202ENST00000518882 MGST2Q99735 147 aa13.74□□□□□ -0.21
PCDHGA11-202ENST00000518882 NDUFAF3Q9BU61 184 aa13.74□□□□□ -0.21
PCDHGA11-202ENST00000518882 PRSS46E5RG02 174 aa13.74□□□□□ -0.21
PCDHGA11-202ENST00000518882 TNFSF15O95150 251 aa13.74□□□□□ -0.21
PCDHGA11-202ENST00000518882 IGHV3-13P01766 116 aa13.74□□□□□ -0.21
PCDHGA11-202ENST00000518882 IGHV3-7P01780 117 aa13.74□□□□□ -0.21
PCDHGA11-202ENST00000518882 ZNF883P0CG24 379 aa13.74□□□□□ -0.21
PCDHGA11-202ENST00000518882 FABP6P51161 128 aa13.74□□□□□ -0.21
PCDHGA11-202ENST00000518882 TRIP6Q15654 476 aaKnown RBP13.74□□□□□ -0.21
PCDHGA11-202ENST00000518882 TMEM249Q2WGJ8 235 aa13.74□□□□□ -0.21
PCDHGA11-202ENST00000518882 AARDQ4LEZ3 155 aa13.74□□□□□ -0.21
PCDHGA11-202ENST00000518882 TMEM256Q8N2U0 113 aa13.74□□□□□ -0.21
PCDHGA11-202ENST00000518882 WDR31Q8NA23 367 aa13.74□□□□□ -0.21
PCDHGA11-202ENST00000518882 C2orf88Q9BSF0 95 aa13.74□□□□□ -0.21
PCDHGA11-202ENST00000518882 TRAPPC1Q9Y5R8 145 aa13.74□□□□□ -0.21
PCDHGA11-202ENST00000518882 TRAV3A0A0B4J244 114 aa13.73□□□□□ -0.21
PCDHGA11-202ENST00000518882 ZNF891A8MT65 544 aaPredicted RBP13.73□□□□□ -0.21
PCDHGA11-202ENST00000518882 TIMM8AO60220 97 aaPredicted RBP13.73□□□□□ -0.21
PCDHGA11-202ENST00000518882 NUPR1O60356 82 aa13.73□□□□□ -0.21
PCDHGA11-202ENST00000518882 IGKV3-15P01624 115 aa13.73□□□□□ -0.21
PCDHGA11-202ENST00000518882 GPR12P47775 334 aa13.73□□□□□ -0.21
PCDHGA11-202ENST00000518882 PRAMEF5Q5TYX0 476 aa13.73□□□□□ -0.21
PCDHGA11-202ENST00000518882 MIC13Q5XKP0 118 aa13.73□□□□□ -0.21
PCDHGA11-202ENST00000518882 Q6ZT83 130 aa13.73□□□□□ -0.21
PCDHGA11-202ENST00000518882 TCF23Q7RTU1 214 aa13.73□□□□□ -0.21
PCDHGA11-202ENST00000518882 SFRP2Q96HF1 295 aa13.73□□□□□ -0.21
PCDHGA11-202ENST00000518882 FER1L6-AS2Q96M78 137 aa13.73□□□□□ -0.21
PCDHGA11-202ENST00000518882 MS4A5Q9H3V2 200 aa13.73□□□□□ -0.21
PCDHGA11-202ENST00000518882 CLCF1Q9UBD9 225 aa13.73□□□□□ -0.21
PCDHGA11-202ENST00000518882 PXMP4Q9Y6I8 212 aa13.73□□□□□ -0.21
PCDHGA11-202ENST00000518882 SPINT2O43291 252 aa13.73□□□□□ -0.21
PCDHGA11-202ENST00000518882 HNF1AP20823 631 aa13.73□□□□□ -0.21
PCDHGA11-202ENST00000518882 HTD2P86397 168 aa13.73□□□□□ -0.21
PCDHGA11-202ENST00000518882 SMIM21Q3B7S5 101 aa13.73□□□□□ -0.21
PCDHGA11-202ENST00000518882 FAM214BQ7L5A3 538 aa13.73□□□□□ -0.21
PCDHGA11-202ENST00000518882 C1orf159Q96HA4 380 aa13.73□□□□□ -0.21
PCDHGA11-202ENST00000518882 CFAP47Q6ZTR5 3102 aa13.72□□□□□ -0.21
PCDHGA11-202ENST00000518882 SCO2A0A1W2PP80 73 aa13.72□□□□□ -0.21
PCDHGA11-202ENST00000518882 GCH1P30793 250 aa13.72□□□□□ -0.21
PCDHGA11-202ENST00000518882 VDAC2P45880 294 aaPredicted RBP13.72□□□□□ -0.21
PCDHGA11-202ENST00000518882 PAX5Q02548 391 aa13.72□□□□□ -0.21
PCDHGA11-202ENST00000518882 RPL39P5Q59GN2 51 aa13.72□□□□□ -0.21
PCDHGA11-202ENST00000518882 ABHD12Q8N2K0 398 aa13.72□□□□□ -0.21
PCDHGA11-202ENST00000518882 CNEP1R1Q8N9A8 125 aa13.72□□□□□ -0.21
PCDHGA11-202ENST00000518882 SGMS2Q8NHU3 365 aa13.72□□□□□ -0.21
PCDHGA11-202ENST00000518882 TRIB1Q96RU8 372 aa13.72□□□□□ -0.21
PCDHGA11-202ENST00000518882 GGTLC1Q9BX51 225 aa13.72□□□□□ -0.21
PCDHGA11-202ENST00000518882 ELOVL5Q9NYP7 299 aa13.72□□□□□ -0.21
PCDHGA11-202ENST00000518882 INTS1Q8N201 2190 aaKnown RBP13.72□□□□□ -0.21
PCDHGA11-202ENST00000518882 HPRT1P00492 218 aa13.71□□□□□ -0.21
PCDHGA11-202ENST00000518882 ADH4P08319 380 aa13.71□□□□□ -0.21
PCDHGA11-202ENST00000518882 STAG3L2P0CL84 134 aa13.71□□□□□ -0.21
PCDHGA11-202ENST00000518882 STAG3L3P0CL85 134 aa13.71□□□□□ -0.21
PCDHGA11-202ENST00000518882 OPRK1P41145 380 aa13.71□□□□□ -0.21
PCDHGA11-202ENST00000518882 SPCS3P61009 180 aa13.71□□□□□ -0.21
PCDHGA11-202ENST00000518882 FOXL1Q12952 345 aa13.71□□□□□ -0.21
PCDHGA11-202ENST00000518882 HEYLQ9NQ87 328 aaPredicted RBP13.71□□□□□ -0.21
PCDHGA11-202ENST00000518882 F6UZH7 168 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms