RNA–Protein interactions for RNA: ENST00000517181.1

RNU1-54P-201, Transcript of RNA, U1 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU1-54P, Length 120 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-54P-201ENST00000517181 LRRC39Q96DD0 335 aa-0.21□□□□□ -2.44
RNU1-54P-201ENST00000517181 TMEM56Q96MV1 263 aa-0.21□□□□□ -2.44
RNU1-54P-201ENST00000517181 NMNAT3Q96T66 252 aa-0.21□□□□□ -2.44
RNU1-54P-201ENST00000517181 EMC3Q9P0I2 261 aa-0.21□□□□□ -2.44
RNU1-54P-201ENST00000517181 ENPP5Q9UJA9 477 aa-0.21□□□□□ -2.44
RNU1-54P-201ENST00000517181 TRAV8-1A0A0A6YYK1 113 aa-0.22□□□□□ -2.44
RNU1-54P-201ENST00000517181 COPEO14579 308 aa-0.22□□□□□ -2.44
RNU1-54P-201ENST00000517181 CREBL2O60519 120 aaPredicted RBP-0.22□□□□□ -2.44
RNU1-54P-201ENST00000517181 TRGC1P0CF51 173 aa-0.22□□□□□ -2.44
RNU1-54P-201ENST00000517181 ADORA1P30542 326 aa-0.22□□□□□ -2.44
RNU1-54P-201ENST00000517181 PSMD7P51665 324 aa-0.22□□□□□ -2.44
RNU1-54P-201ENST00000517181 XIAPP98170 497 aa-0.22□□□□□ -2.44
RNU1-54P-201ENST00000517181 FAM27BQ5VT28 67 aa-0.22□□□□□ -2.44
RNU1-54P-201ENST00000517181 DHFR2Q86XF0 187 aa-0.22□□□□□ -2.44
RNU1-54P-201ENST00000517181 C17orf78Q8N4C9 275 aa-0.22□□□□□ -2.44
RNU1-54P-201ENST00000517181 SLC22A24Q8N4F4 322 aa-0.22□□□□□ -2.44
RNU1-54P-201ENST00000517181 Q8WTZ3 238 aa-0.22□□□□□ -2.44
RNU1-54P-201ENST00000517181 KIF24Q5T7B8 1368 aa-0.22□□□□□ -2.45
RNU1-54P-201ENST00000517181 RP1P56715 2156 aa-0.22□□□□□ -2.45
RNU1-54P-201ENST00000517181 NUP160Q12769 1436 aa-0.22□□□□□ -2.45
RNU1-54P-201ENST00000517181 SYNE2Q8WXH0 6885 aaKnown RBP-0.23□□□□□ -2.45
RNU1-54P-201ENST00000517181 A0A087WX48 190 aa-0.23□□□□□ -2.45
RNU1-54P-201ENST00000517181 TRBV6-7A0A0A0MS04 114 aa-0.23□□□□□ -2.45
RNU1-54P-201ENST00000517181 RAB19A4D1S5 217 aa-0.23□□□□□ -2.45
RNU1-54P-201ENST00000517181 ATP8B1O43520 1251 aa-0.23□□□□□ -2.45
RNU1-54P-201ENST00000517181 MPZL2O60487 215 aa-0.23□□□□□ -2.45
RNU1-54P-201ENST00000517181 TFPTP0C1Z6 253 aa-0.23□□□□□ -2.45
RNU1-54P-201ENST00000517181 CCL2P13500 99 aa-0.23□□□□□ -2.45
RNU1-54P-201ENST00000517181 CDK9P50750 372 aaKnown RBP-0.23□□□□□ -2.45
RNU1-54P-201ENST00000517181 OR4C6Q8NH72 309 aa-0.23□□□□□ -2.45
RNU1-54P-201ENST00000517181 TLCD1Q96CP7 247 aa-0.23□□□□□ -2.45
RNU1-54P-201ENST00000517181 PRRG3Q9BZD7 231 aa-0.23□□□□□ -2.45
RNU1-54P-201ENST00000517181 SYNRGQ9UMZ2 1314 aa-0.23□□□□□ -2.45
RNU1-54P-201ENST00000517181 COL7A1Q02388 2944 aa-0.23□□□□□ -2.45
RNU1-54P-201ENST00000517181 ANKRD17O75179 2603 aaKnown RBP-0.23□□□□□ -2.45
RNU1-54P-201ENST00000517181 GOLGA8QA0A0J9YX86 632 aa-0.24□□□□□ -2.45
RNU1-54P-201ENST00000517181 IRGMA1A4Y4 181 aa-0.24□□□□□ -2.45
RNU1-54P-201ENST00000517181 GOLGA8RI6L899 631 aa-0.24□□□□□ -2.45
RNU1-54P-201ENST00000517181 ITGB1BP1O14713 200 aa-0.24□□□□□ -2.45
RNU1-54P-201ENST00000517181 LIN7AO14910 233 aaPredicted RBP-0.24□□□□□ -2.45
RNU1-54P-201ENST00000517181 COCHO43405 550 aa-0.24□□□□□ -2.45
RNU1-54P-201ENST00000517181 PPBPP02775 128 aa-0.24□□□□□ -2.45
RNU1-54P-201ENST00000517181 ATP5G1P05496 136 aa-0.24□□□□□ -2.45
RNU1-54P-201ENST00000517181 GP1BAP07359 652 aa-0.24□□□□□ -2.45
RNU1-54P-201ENST00000517181 TPM2P07951 284 aa-0.24□□□□□ -2.45
RNU1-54P-201ENST00000517181 SLC35E2BP0CK96 405 aa-0.24□□□□□ -2.45
RNU1-54P-201ENST00000517181 DLX6P56179 175 aa-0.24□□□□□ -2.45
RNU1-54P-201ENST00000517181 H2BFSP57053 126 aa-0.24□□□□□ -2.45
RNU1-54P-201ENST00000517181 TMEM33P57088 247 aa-0.24□□□□□ -2.45
RNU1-54P-201ENST00000517181 RAB8AP61006 207 aa-0.24□□□□□ -2.45
RNU1-54P-201ENST00000517181 AP1S1P61966 158 aa-0.24□□□□□ -2.45
RNU1-54P-201ENST00000517181 AKR1C1Q04828 323 aa-0.24□□□□□ -2.45
RNU1-54P-201ENST00000517181 SRSF6Q13247 344 aaKnown RBP-0.24□□□□□ -2.45
RNU1-54P-201ENST00000517181 OR4D1Q15615 310 aa-0.24□□□□□ -2.45
RNU1-54P-201ENST00000517181 LRRC26Q2I0M4 334 aa-0.24□□□□□ -2.45
RNU1-54P-201ENST00000517181 DYNC2LI1Q8TCX1 351 aa-0.24□□□□□ -2.45
RNU1-54P-201ENST00000517181 ASB13Q8WXK3 278 aa-0.24□□□□□ -2.45
RNU1-54P-201ENST00000517181 AQP3Q92482 292 aa-0.24□□□□□ -2.45
RNU1-54P-201ENST00000517181 TESCQ96BS2 214 aa-0.24□□□□□ -2.45
RNU1-54P-201ENST00000517181 ZFP30Q9Y2G7 519 aa-0.24□□□□□ -2.45
RNU1-54P-201ENST00000517181 KCPQ6ZWJ8 1503 aa-0.24□□□□□ -2.45
RNU1-54P-201ENST00000517181 FSIP2Q5CZC0 6907 aa-0.25□□□□□ -2.45
RNU1-54P-201ENST00000517181 A0A1B0GW54 56 aa-0.25□□□□□ -2.45
RNU1-54P-201ENST00000517181 HMMRO75330 724 aa-0.25□□□□□ -2.45
RNU1-54P-201ENST00000517181 FADS2O95864 444 aaKnown RBP-0.25□□□□□ -2.45
RNU1-54P-201ENST00000517181 CIRBPQ14011 172 aaKnown RBP-0.25□□□□□ -2.45
RNU1-54P-201ENST00000517181 C1orf158Q8N1D5 194 aa-0.25□□□□□ -2.45
RNU1-54P-201ENST00000517181 OR52E4Q8NGH9 312 aa-0.25□□□□□ -2.45
RNU1-54P-201ENST00000517181 SMIM12Q96EX1 92 aa-0.25□□□□□ -2.45
RNU1-54P-201ENST00000517181 SERPINB11Q96P15 392 aa-0.25□□□□□ -2.45
RNU1-54P-201ENST00000517181 SERPINI1Q99574 410 aa-0.25□□□□□ -2.45
RNU1-54P-201ENST00000517181 NAT8Q9UHE5 227 aa-0.25□□□□□ -2.45
RNU1-54P-201ENST00000517181 POFUT2Q9Y2G5 429 aa-0.25□□□□□ -2.45
RNU1-54P-201ENST00000517181 SBDSQ9Y3A5 250 aaKnown RBP eCLIP-0.25□□□□□ -2.45
RNU1-54P-201ENST00000517181 PCYT1BQ9Y5K3 369 aaPredicted RBP-0.25□□□□□ -2.45
RNU1-54P-201ENST00000517181 ADGRB2O60241 1585 aa-0.25□□□□□ -2.45
RNU1-54P-201ENST00000517181 IGSF10Q6WRI0 2623 aa-0.25□□□□□ -2.45
RNU1-54P-201ENST00000517181 TMEM94Q12767 1356 aa-0.26□□□□□ -2.45
RNU1-54P-201ENST00000517181 IGKV1D-42A0A075B6H8 117 aa-0.26□□□□□ -2.45
RNU1-54P-201ENST00000517181 TRBV10-2A0A0K0K1G8 114 aa-0.26□□□□□ -2.45
RNU1-54P-201ENST00000517181 TMEM212A6NML5 194 aa-0.26□□□□□ -2.45
RNU1-54P-201ENST00000517181 SDCBPO00560 298 aaPredicted RBP-0.26□□□□□ -2.45
RNU1-54P-201ENST00000517181 BRI3O95415 125 aa-0.26□□□□□ -2.45
RNU1-54P-201ENST00000517181 UBBP0CG47 229 aa-0.26□□□□□ -2.45
RNU1-54P-201ENST00000517181 CFL1P23528 166 aaKnown RBP-0.26□□□□□ -2.45
RNU1-54P-201ENST00000517181 KCNJ3P48549 501 aa-0.26□□□□□ -2.45
RNU1-54P-201ENST00000517181 FABP5Q01469 135 aa-0.26□□□□□ -2.45
RNU1-54P-201ENST00000517181 GNA13Q14344 377 aa-0.26□□□□□ -2.45
RNU1-54P-201ENST00000517181 ZNF345Q14585 488 aa-0.26□□□□□ -2.45
RNU1-54P-201ENST00000517181 ZNF846Q147U1 533 aa-0.26□□□□□ -2.45
RNU1-54P-201ENST00000517181 CDK10Q15131 360 aa-0.26□□□□□ -2.45
RNU1-54P-201ENST00000517181 CLEC12BQ2HXU8 276 aa-0.26□□□□□ -2.45
RNU1-54P-201ENST00000517181 RBM48Q5RL73 367 aaKnown RBP-0.26□□□□□ -2.45
RNU1-54P-201ENST00000517181 C9orf64Q5T6V5 341 aa-0.26□□□□□ -2.45
RNU1-54P-201ENST00000517181 CCDC12Q8WUD4 166 aaPredicted RBP-0.26□□□□□ -2.45
RNU1-54P-201ENST00000517181 YIPF3Q9GZM5 350 aa-0.26□□□□□ -2.45
RNU1-54P-201ENST00000517181 TNRC6AQ8NDV7 1962 aaKnown RBP-0.26□□□□□ -2.45
RNU1-54P-201ENST00000517181 SHBGP04278 402 aa-0.27□□□□□ -2.45
RNU1-54P-201ENST00000517181 HLA-DQB2P05538 268 aa-0.27□□□□□ -2.45
RNU1-54P-201ENST00000517181 MSMBP08118 114 aa-0.27□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms