RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 AGAP20933 346 aa14.08□□□□□ -0.16
PCDHA1-203ENST00000504120 LEAP2Q969E1 77 aa14.08□□□□□ -0.16
PCDHA1-203ENST00000504120 PIMREGQ9BSJ6 248 aa14.08□□□□□ -0.16
PCDHA1-203ENST00000504120 B9A039 149 aa14.08□□□□□ -0.16
PCDHA1-203ENST00000504120 LIPFP07098 398 aa14.08□□□□□ -0.16
PCDHA1-203ENST00000504120 TIMM23BQ5SRD1 257 aa14.08□□□□□ -0.16
PCDHA1-203ENST00000504120 C19orf48Q6RUI8 117 aa14.08□□□□□ -0.16
PCDHA1-203ENST00000504120 SDHCQ99643 169 aaPredicted RBP14.08□□□□□ -0.16
PCDHA1-203ENST00000504120 LOC105371242A0A075B767 164 aa14.08□□□□□ -0.16
PCDHA1-203ENST00000504120 GLRXP35754 106 aa14.08□□□□□ -0.16
PCDHA1-203ENST00000504120 RAB9AP51151 201 aa14.08□□□□□ -0.16
PCDHA1-203ENST00000504120 EAF1Q96JC9 268 aaPredicted RBP14.08□□□□□ -0.16
PCDHA1-203ENST00000504120 RALYQ9UKM9 306 aaKnown RBP14.08□□□□□ -0.16
PCDHA1-203ENST00000504120 OTOFQ9HC10 1997 aa14.07□□□□□ -0.16
PCDHA1-203ENST00000504120 ZNF207O43670 478 aaKnown RBP14.07□□□□□ -0.16
PCDHA1-203ENST00000504120 MRPL18Q9H0U6 180 aaKnown RBP14.07□□□□□ -0.16
PCDHA1-203ENST00000504120 PTPRFP10586 1907 aa14.07□□□□□ -0.16
PCDHA1-203ENST00000504120 TGFBR3LH3BV60 316 aa14.07□□□□□ -0.16
PCDHA1-203ENST00000504120 PMCHL1Q16048 86 aa14.07□□□□□ -0.16
PCDHA1-203ENST00000504120 OR4C46A6NHA9 309 aa14.07□□□□□ -0.16
PCDHA1-203ENST00000504120 ARF6P62330 175 aa14.07□□□□□ -0.16
PCDHA1-203ENST00000504120 TMEM177Q53S58 311 aa14.07□□□□□ -0.16
PCDHA1-203ENST00000504120 ZCCHC14Q8WYQ9 949 aaKnown RBP14.07□□□□□ -0.16
PCDHA1-203ENST00000504120 MARVELD3Q96A59 401 aa14.07□□□□□ -0.16
PCDHA1-203ENST00000504120 A0A0G2JK05 382 aa14.07□□□□□ -0.16
PCDHA1-203ENST00000504120 ZNF25P17030 456 aaPredicted RBP14.07□□□□□ -0.16
PCDHA1-203ENST00000504120 NMUP48645 174 aa14.07□□□□□ -0.16
PCDHA1-203ENST00000504120 MEGF10Q96KG7 1140 aa14.07□□□□□ -0.16
PCDHA1-203ENST00000504120 LRRC37A2A6NM11 1700 aa14.07□□□□□ -0.16
PCDHA1-203ENST00000504120 NABP2Q9BQ15 211 aa14.06□□□□□ -0.16
PCDHA1-203ENST00000504120 TGIF2-C20orf24A0A0A6YYL0 155 aa14.06□□□□□ -0.16
PCDHA1-203ENST00000504120 SIGLEC5O15389 551 aa14.06□□□□□ -0.16
PCDHA1-203ENST00000504120 COL5A1-AS1Q5SY13 56 aa14.06□□□□□ -0.16
PCDHA1-203ENST00000504120 FDCSPQ8NFU4 85 aa14.06□□□□□ -0.16
PCDHA1-203ENST00000504120 OR1N2Q8NGR9 330 aa14.06□□□□□ -0.16
PCDHA1-203ENST00000504120 SIGLEC12Q96PQ1 595 aa14.06□□□□□ -0.16
PCDHA1-203ENST00000504120 AICDAQ9GZX7 198 aa14.06□□□□□ -0.16
PCDHA1-203ENST00000504120 PRR19A6NJB7 356 aa14.06□□□□□ -0.16
PCDHA1-203ENST00000504120 OR4B1Q8NGF8 309 aa14.06□□□□□ -0.16
PCDHA1-203ENST00000504120 GATAD1Q8WUU5 269 aa14.06□□□□□ -0.16
PCDHA1-203ENST00000504120 DNAJC13O75165 2243 aa14.06□□□□□ -0.16
PCDHA1-203ENST00000504120 CRXO43186 299 aaPredicted RBP14.06□□□□□ -0.16
PCDHA1-203ENST00000504120 CRYBB3P26998 211 aa14.06□□□□□ -0.16
PCDHA1-203ENST00000504120 TFPI2P48307 235 aa14.06□□□□□ -0.16
PCDHA1-203ENST00000504120 C1QL2Q7Z5L3 287 aa14.06□□□□□ -0.16
PCDHA1-203ENST00000504120 FADS6Q8N9I5 356 aa14.06□□□□□ -0.16
PCDHA1-203ENST00000504120 TET1Q8NFU7 2136 aa14.06□□□□□ -0.16
PCDHA1-203ENST00000504120 BTF3P20290 206 aaKnown RBP14.06□□□□□ -0.16
PCDHA1-203ENST00000504120 C2orf68Q2NKX9 166 aa14.06□□□□□ -0.16
PCDHA1-203ENST00000504120 FAM106AQ4KMX7 169 aa14.06□□□□□ -0.16
PCDHA1-203ENST00000504120 C1orf162Q8NEQ5 155 aaPredicted RBP14.06□□□□□ -0.16
PCDHA1-203ENST00000504120 FOXD3Q9UJU5 478 aaPredicted RBP14.06□□□□□ -0.16
PCDHA1-203ENST00000504120 IGKV1D-43A0A0B4J1Z2 117 aa14.05□□□□□ -0.16
PCDHA1-203ENST00000504120 ZIC3O60481 467 aa14.05□□□□□ -0.16
PCDHA1-203ENST00000504120 ACP7Q6ZNF0 438 aa14.05□□□□□ -0.16
PCDHA1-203ENST00000504120 VKORC1L1Q8N0U8 176 aa14.05□□□□□ -0.16
PCDHA1-203ENST00000504120 PGLYRP4Q96LB8 373 aa14.05□□□□□ -0.16
PCDHA1-203ENST00000504120 PARLQ9H300 379 aa14.05□□□□□ -0.16
PCDHA1-203ENST00000504120 LNP1A1A4G5 178 aa14.05□□□□□ -0.16
PCDHA1-203ENST00000504120 NPIPB11E5RHQ5 1161 aa14.05□□□□□ -0.16
PCDHA1-203ENST00000504120 NPIPB6E9PJ23 425 aa14.05□□□□□ -0.16
PCDHA1-203ENST00000504120 CA2P00918 260 aa14.05□□□□□ -0.16
PCDHA1-203ENST00000504120 GALNT14Q96FL9 552 aa14.05□□□□□ -0.16
PCDHA1-203ENST00000504120 ATP5G2Q06055 141 aa14.05□□□□□ -0.16
PCDHA1-203ENST00000504120 MUC15Q8N387 334 aa14.05□□□□□ -0.16
PCDHA1-203ENST00000504120 VWCEQ96DN2 955 aa14.05□□□□□ -0.16
PCDHA1-203ENST00000504120 C1QTNF5Q9BXJ0 243 aa14.05□□□□□ -0.16
PCDHA1-203ENST00000504120 AUP1Q9Y679 476 aa14.05□□□□□ -0.16
PCDHA1-203ENST00000504120 TRBV9A0A0B4J1U6 114 aa14.04□□□□□ -0.16
PCDHA1-203ENST00000504120 TMEM250H0YL14 139 aa14.04□□□□□ -0.16
PCDHA1-203ENST00000504120 LEPROTL1O95214 131 aa14.04□□□□□ -0.16
PCDHA1-203ENST00000504120 PLSCR2Q9NRY7 297 aa14.04□□□□□ -0.16
PCDHA1-203ENST00000504120 ZNF502Q8TBZ5 544 aa14.04□□□□□ -0.16
PCDHA1-203ENST00000504120 NPIPB3Q92617 1050 aa14.04□□□□□ -0.16
PCDHA1-203ENST00000504120 TPRP12270 2363 aaKnown RBP14.04□□□□□ -0.16
PCDHA1-203ENST00000504120 MAP1LC3AQ9H492 121 aa14.04□□□□□ -0.16
PCDHA1-203ENST00000504120 CKAP5Q14008 2032 aa14.04□□□□□ -0.16
PCDHA1-203ENST00000504120 CELA3AP09093 270 aa14.04□□□□□ -0.16
PCDHA1-203ENST00000504120 ANOS1P23352 680 aa14.04□□□□□ -0.16
PCDHA1-203ENST00000504120 GCHFRP30047 84 aa14.04□□□□□ -0.16
PCDHA1-203ENST00000504120 WDR25Q64LD2 544 aaPredicted RBP14.04□□□□□ -0.16
PCDHA1-203ENST00000504120 PNKDQ8N490 385 aa14.04□□□□□ -0.16
PCDHA1-203ENST00000504120 ZNRF1Q8ND25 227 aa14.04□□□□□ -0.16
PCDHA1-203ENST00000504120 MRPS18CQ9Y3D5 142 aaKnown RBP14.04□□□□□ -0.16
PCDHA1-203ENST00000504120 PATJQ8NI35 1801 aa14.03□□□□□ -0.16
PCDHA1-203ENST00000504120 MPTX1A8MV57 137 aa14.03□□□□□ -0.16
PCDHA1-203ENST00000504120 REG1AP05451 166 aa14.03□□□□□ -0.16
PCDHA1-203ENST00000504120 GCSHP23434 173 aa14.03□□□□□ -0.16
PCDHA1-203ENST00000504120 APOBEC3AP31941 199 aaPredicted RBP14.03□□□□□ -0.16
PCDHA1-203ENST00000504120 FXYD3Q14802 87 aa14.03□□□□□ -0.16
PCDHA1-203ENST00000504120 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.03□□□□□ -0.16
PCDHA1-203ENST00000504120 ELOVL1Q9BW60 279 aa14.03□□□□□ -0.16
PCDHA1-203ENST00000504120 TMEM238LA0A1B0GVL6 79 aa14.03□□□□□ -0.16
PCDHA1-203ENST00000504120 A6NJY4 79 aa14.03□□□□□ -0.16
PCDHA1-203ENST00000504120 C12orf77C9JDV5 145 aa14.03□□□□□ -0.16
PCDHA1-203ENST00000504120 EFEMP2O95967 443 aa14.03□□□□□ -0.16
PCDHA1-203ENST00000504120 CSRP2Q16527 193 aa14.03□□□□□ -0.16
PCDHA1-203ENST00000504120 ZNF506Q5JVG8 444 aa14.03□□□□□ -0.16
PCDHA1-203ENST00000504120 ABLIM2Q6H8Q1 611 aa14.03□□□□□ -0.16
PCDHA1-203ENST00000504120 LAMTOR1Q6IAA8 161 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms