RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 GRIN2BQ13224 1484 aa1.39□□□□□ -2.19
HMGB1P35-201ENST00000503360 RTL1A6NKG5 1358 aa1.39□□□□□ -2.19
HMGB1P35-201ENST00000503360 NUP155O75694 1391 aa1.39□□□□□ -2.19
HMGB1P35-201ENST00000503360 MTUS2Q5JR59 1369 aa1.39□□□□□ -2.19
HMGB1P35-201ENST00000503360 KIF24Q5T7B8 1368 aa1.39□□□□□ -2.19
HMGB1P35-201ENST00000503360 C7orf66A4D0T2 115 aa1.39□□□□□ -2.19
HMGB1P35-201ENST00000503360 TRAPPC13A5PLN9 417 aa1.39□□□□□ -2.19
HMGB1P35-201ENST00000503360 LINC00862A6NCI5 91 aa1.39□□□□□ -2.19
HMGB1P35-201ENST00000503360 COLCA2A8K830 154 aa1.39□□□□□ -2.19
HMGB1P35-201ENST00000503360 G3V2T6 193 aa1.39□□□□□ -2.19
HMGB1P35-201ENST00000503360 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.39□□□□□ -2.19
HMGB1P35-201ENST00000503360 H7C1C5 153 aa1.39□□□□□ -2.19
HMGB1P35-201ENST00000503360 PIRO00625 290 aa1.39□□□□□ -2.19
HMGB1P35-201ENST00000503360 CCNKO75909 580 aa1.39□□□□□ -2.19
HMGB1P35-201ENST00000503360 NRASP01111 189 aa1.39□□□□□ -2.19
HMGB1P35-201ENST00000503360 HRASP01112 189 aa1.39□□□□□ -2.19
HMGB1P35-201ENST00000503360 KRASP01116 189 aa1.39□□□□□ -2.19
HMGB1P35-201ENST00000503360 PDYNP01213 254 aa1.39□□□□□ -2.19
HMGB1P35-201ENST00000503360 C1QBP02746 253 aa1.39□□□□□ -2.19
HMGB1P35-201ENST00000503360 GYPCP04921 128 aa1.39□□□□□ -2.19
HMGB1P35-201ENST00000503360 C8GP07360 202 aa1.39□□□□□ -2.19
HMGB1P35-201ENST00000503360 CD28P10747 220 aa1.39□□□□□ -2.19
HMGB1P35-201ENST00000503360 SPI1P17947 270 aa1.39□□□□□ -2.19
HMGB1P35-201ENST00000503360 PPIBP23284 216 aaKnown RBP1.39□□□□□ -2.19
HMGB1P35-201ENST00000503360 S100GP29377 79 aa1.39□□□□□ -2.19
HMGB1P35-201ENST00000503360 ERP29P30040 261 aaKnown RBP1.39□□□□□ -2.19
HMGB1P35-201ENST00000503360 MPV17P39210 176 aa1.39□□□□□ -2.19
HMGB1P35-201ENST00000503360 DAPP51397 102 aa1.39□□□□□ -2.19
HMGB1P35-201ENST00000503360 TAS2R45P59539 299 aa1.39□□□□□ -2.19
HMGB1P35-201ENST00000503360 FGF12P61328 243 aa1.39□□□□□ -2.19
HMGB1P35-201ENST00000503360 LCN6P62502 163 aa1.39□□□□□ -2.19
HMGB1P35-201ENST00000503360 RHOBP62745 196 aa1.39□□□□□ -2.19
HMGB1P35-201ENST00000503360 TNFAIP6P98066 277 aaPredicted RBP1.39□□□□□ -2.19
HMGB1P35-201ENST00000503360 ENDOGQ14249 297 aaKnown RBP1.39□□□□□ -2.19
HMGB1P35-201ENST00000503360 GRK1Q15835 563 aa1.39□□□□□ -2.19
HMGB1P35-201ENST00000503360 SP6Q3SY56 376 aa1.39□□□□□ -2.19
HMGB1P35-201ENST00000503360 IBA57Q5T440 356 aaKnown RBP1.39□□□□□ -2.19
HMGB1P35-201ENST00000503360 ZNF880Q6PDB4 577 aa1.39□□□□□ -2.19
HMGB1P35-201ENST00000503360 DCUN1D2Q6PH85 259 aa1.39□□□□□ -2.19
HMGB1P35-201ENST00000503360 SCXQ7RTU7 201 aa1.39□□□□□ -2.19
HMGB1P35-201ENST00000503360 AMN1Q8IY45 258 aa1.39□□□□□ -2.19
HMGB1P35-201ENST00000503360 C1orf174Q8IYL3 243 aa1.39□□□□□ -2.19
HMGB1P35-201ENST00000503360 UMODL1-AS1Q8N2C9 162 aa1.39□□□□□ -2.19
HMGB1P35-201ENST00000503360 ZNF664Q8N3J9 261 aa1.39□□□□□ -2.19
HMGB1P35-201ENST00000503360 MIR7-3HGQ8N6C7 128 aa1.39□□□□□ -2.19
HMGB1P35-201ENST00000503360 GDPD1Q8N9F7 314 aa1.39□□□□□ -2.19
HMGB1P35-201ENST00000503360 OR8B12Q8NGG6 310 aa1.39□□□□□ -2.19
HMGB1P35-201ENST00000503360 OR10K1Q8NGX5 313 aa1.39□□□□□ -2.19
HMGB1P35-201ENST00000503360 ITLN2Q8WWU7 325 aaPredicted RBP1.39□□□□□ -2.19
HMGB1P35-201ENST00000503360 MAFIPQ8WZ33 124 aa1.39□□□□□ -2.19
HMGB1P35-201ENST00000503360 OR5P3Q8WZ94 311 aa1.39□□□□□ -2.19
HMGB1P35-201ENST00000503360 MAL2Q969L2 176 aa1.39□□□□□ -2.19
HMGB1P35-201ENST00000503360 TSPAN32Q96QS1 320 aa1.39□□□□□ -2.19
HMGB1P35-201ENST00000503360 B9D2Q9BPU9 175 aa1.39□□□□□ -2.19
HMGB1P35-201ENST00000503360 SHANK2-AS3Q9BTD1 123 aa1.39□□□□□ -2.19
HMGB1P35-201ENST00000503360 PBDC1Q9BVG4 233 aa1.39□□□□□ -2.19
HMGB1P35-201ENST00000503360 TMEM147Q9BVK8 224 aa1.39□□□□□ -2.19
HMGB1P35-201ENST00000503360 C1QTNF6Q9BXI9 259 aa1.39□□□□□ -2.19
HMGB1P35-201ENST00000503360 C20orf27Q9GZN8 174 aa1.39□□□□□ -2.19
HMGB1P35-201ENST00000503360 CCDC90BQ9GZT6 254 aa1.39□□□□□ -2.19
HMGB1P35-201ENST00000503360 CXorf21Q9HAI6 301 aa1.39□□□□□ -2.19
HMGB1P35-201ENST00000503360 LYRM2Q9NU23 88 aaPredicted RBP1.39□□□□□ -2.19
HMGB1P35-201ENST00000503360 ACER3Q9NUN7 267 aa1.39□□□□□ -2.19
HMGB1P35-201ENST00000503360 PRNDQ9UKY0 176 aa1.39□□□□□ -2.19
HMGB1P35-201ENST00000503360 SSR3Q9UNL2 185 aa1.39□□□□□ -2.19
HMGB1P35-201ENST00000503360 GINS2Q9Y248 185 aa1.39□□□□□ -2.19
HMGB1P35-201ENST00000503360 SLC35A3Q9Y2D2 325 aa1.39□□□□□ -2.19
HMGB1P35-201ENST00000503360 MRPS16Q9Y3D3 137 aaKnown RBP1.39□□□□□ -2.19
HMGB1P35-201ENST00000503360 TRAPPC1Q9Y5R8 145 aa1.39□□□□□ -2.19
HMGB1P35-201ENST00000503360 TMEM56-RWDD3S4R434 201 aa1.39□□□□□ -2.19
HMGB1P35-201ENST00000503360 YTHDC2Q9H6S0 1430 aaKnown RBP1.39□□□□□ -2.19
HMGB1P35-201ENST00000503360 MIA3Q5JRA6 1907 aa1.38□□□□□ -2.19
HMGB1P35-201ENST00000503360 DHX57Q6P158 1386 aaKnown RBP1.38□□□□□ -2.19
HMGB1P35-201ENST00000503360 hCG_1818297A0A087WSY0 165 aa1.38□□□□□ -2.19
HMGB1P35-201ENST00000503360 TRAV40A0A0B4J280 105 aa1.38□□□□□ -2.19
HMGB1P35-201ENST00000503360 A0A1W2PQ67 120 aa1.38□□□□□ -2.19
HMGB1P35-201ENST00000503360 MAP1LC3B2A6NCE7 125 aa1.38□□□□□ -2.19
HMGB1P35-201ENST00000503360 ZNF729A6NN14 1252 aaPredicted RBP1.38□□□□□ -2.19
HMGB1P35-201ENST00000503360 A8MT66 165 aa1.38□□□□□ -2.19
HMGB1P35-201ENST00000503360 IGLL5B9A064 214 aa1.38□□□□□ -2.19
HMGB1P35-201ENST00000503360 COX7A2LO14548 114 aa1.38□□□□□ -2.19
HMGB1P35-201ENST00000503360 LGALS1P09382 135 aaKnown RBP1.38□□□□□ -2.19
HMGB1P35-201ENST00000503360 RBP1P09455 135 aa1.38□□□□□ -2.19
HMGB1P35-201ENST00000503360 ZNF705DP0CH99 300 aaPredicted RBP1.38□□□□□ -2.19
HMGB1P35-201ENST00000503360 NTF3P20783 257 aa1.38□□□□□ -2.19
HMGB1P35-201ENST00000503360 GTF2A1P52655 376 aaPredicted RBP1.38□□□□□ -2.19
HMGB1P35-201ENST00000503360 KRTAP10-10P60014 251 aa1.38□□□□□ -2.19
HMGB1P35-201ENST00000503360 RPS20P60866 119 aaKnown RBP1.38□□□□□ -2.19
HMGB1P35-201ENST00000503360 GNG5P63218 68 aa1.38□□□□□ -2.19
HMGB1P35-201ENST00000503360 DEFA6Q01524 100 aa1.38□□□□□ -2.19
HMGB1P35-201ENST00000503360 BSPH1Q075Z2 132 aa1.38□□□□□ -2.19
HMGB1P35-201ENST00000503360 APOFQ13790 326 aa1.38□□□□□ -2.19
HMGB1P35-201ENST00000503360 CST6Q15828 149 aa1.38□□□□□ -2.19
HMGB1P35-201ENST00000503360 LY6EQ16553 131 aa1.38□□□□□ -2.19
HMGB1P35-201ENST00000503360 C12orf74Q32Q52 190 aa1.38□□□□□ -2.19
HMGB1P35-201ENST00000503360 SCGB2B2Q4G0G5 96 aa1.38□□□□□ -2.19
HMGB1P35-201ENST00000503360 TMEM128Q5BJH2 165 aa1.38□□□□□ -2.19
HMGB1P35-201ENST00000503360 TMEM78Q5T7P6 136 aa1.38□□□□□ -2.19
HMGB1P35-201ENST00000503360 TOMM20LQ6UXN7 152 aa1.38□□□□□ -2.19
HMGB1P35-201ENST00000503360 FAM24BQ8N5W8 94 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms