RNA–Protein interactions for RNA: ENST00000502848.5

NR1I3-216, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 914 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-216ENST00000502848 SLC51BQ86UW2 128 aa7.36□□□□□ -1.23
NR1I3-216ENST00000502848 PUSL1Q8N0Z8 303 aaKnown RBP7.36□□□□□ -1.23
NR1I3-216ENST00000502848 GRPEL2Q8TAA5 225 aa7.36□□□□□ -1.23
NR1I3-216ENST00000502848 DCUN1D4Q92564 292 aa7.36□□□□□ -1.23
NR1I3-216ENST00000502848 LHX4Q969G2 390 aa7.36□□□□□ -1.23
NR1I3-216ENST00000502848 RPEQ96AT9 228 aa7.36□□□□□ -1.23
NR1I3-216ENST00000502848 FLYWCH2Q96CP2 140 aaKnown RBP7.36□□□□□ -1.23
NR1I3-216ENST00000502848 PHYHIPLQ96FC7 376 aa7.36□□□□□ -1.23
NR1I3-216ENST00000502848 SLC25A31Q9H0C2 315 aa7.36□□□□□ -1.23
NR1I3-216ENST00000502848 NARFLQ9H6Q4 476 aa7.36□□□□□ -1.23
NR1I3-216ENST00000502848 LYRM2Q9NU23 88 aaPredicted RBP7.36□□□□□ -1.23
NR1I3-216ENST00000502848 PRNDQ9UKY0 176 aa7.36□□□□□ -1.23
NR1I3-216ENST00000502848 FOXA2Q9Y261 457 aaPredicted RBP7.36□□□□□ -1.23
NR1I3-216ENST00000502848 RCL1Q9Y2P8 373 aaKnown RBP7.36□□□□□ -1.23
NR1I3-216ENST00000502848 USP9YO00507 2555 aaPredicted RBP7.35□□□□□ -1.23
NR1I3-216ENST00000502848 IGHV1-3A0A0C4DH29 117 aa7.35□□□□□ -1.23
NR1I3-216ENST00000502848 A0A0G2JRQ6 117 aa7.35□□□□□ -1.23
NR1I3-216ENST00000502848 A0A1W2PPE3 182 aa7.35□□□□□ -1.23
NR1I3-216ENST00000502848 KANTRA0A1W2PQU2 76 aa7.35□□□□□ -1.23
NR1I3-216ENST00000502848 C15orf61A6NNL5 157 aa7.35□□□□□ -1.23
NR1I3-216ENST00000502848 INS-IGF2F8WCM5 200 aa7.35□□□□□ -1.23
NR1I3-216ENST00000502848 BCL2L11O43521 198 aa7.35□□□□□ -1.23
NR1I3-216ENST00000502848 SYNGR2O43760 224 aa7.35□□□□□ -1.23
NR1I3-216ENST00000502848 IGHV3-7P01780 117 aa7.35□□□□□ -1.23
NR1I3-216ENST00000502848 HOXB4P17483 251 aaPredicted RBP7.35□□□□□ -1.23
NR1I3-216ENST00000502848 CXCL2P19875 107 aa7.35□□□□□ -1.23
NR1I3-216ENST00000502848 RPL12P30050 165 aaKnown RBP7.35□□□□□ -1.23
NR1I3-216ENST00000502848 G6PCP35575 357 aa7.35□□□□□ -1.23
NR1I3-216ENST00000502848 SPCS3P61009 180 aa7.35□□□□□ -1.23
NR1I3-216ENST00000502848 RPL23AP62750 156 aaKnown RBP7.35□□□□□ -1.23
NR1I3-216ENST00000502848 C1orf229Q6ZS94 237 aaPredicted RBP7.35□□□□□ -1.23
NR1I3-216ENST00000502848 TMUB2Q71RG4 321 aa7.35□□□□□ -1.23
NR1I3-216ENST00000502848 ZNF767PQ75MW2 155 aa7.35□□□□□ -1.23
NR1I3-216ENST00000502848 STPG2Q8N412 459 aa7.35□□□□□ -1.23
NR1I3-216ENST00000502848 PNKDQ8N490 385 aa7.35□□□□□ -1.23
NR1I3-216ENST00000502848 DMBX1Q8NFW5 382 aa7.35□□□□□ -1.23
NR1I3-216ENST00000502848 OR5B3Q8NH48 314 aa7.35□□□□□ -1.23
NR1I3-216ENST00000502848 MALSU1Q96EH3 234 aa7.35□□□□□ -1.23
NR1I3-216ENST00000502848 SMIM8Q96KF7 97 aa7.35□□□□□ -1.23
NR1I3-216ENST00000502848 HARBI1Q96MB7 349 aa7.35□□□□□ -1.23
NR1I3-216ENST00000502848 TSNAXQ99598 290 aaKnown RBP7.35□□□□□ -1.23
NR1I3-216ENST00000502848 MS4A7Q9GZW8 240 aaPredicted RBP7.35□□□□□ -1.23
NR1I3-216ENST00000502848 ARL6Q9H0F7 186 aa7.35□□□□□ -1.23
NR1I3-216ENST00000502848 TMEM14BQ9NUH8 114 aa7.35□□□□□ -1.23
NR1I3-216ENST00000502848 OR5AC2Q9NZP5 309 aa7.35□□□□□ -1.23
NR1I3-216ENST00000502848 SPTAN1Q13813 2472 aaKnown RBP7.34□□□□□ -1.23
NR1I3-216ENST00000502848 A0A1W2PPI3 338 aa7.34□□□□□ -1.23
NR1I3-216ENST00000502848 FAM157AC9JC47 383 aa7.34□□□□□ -1.23
NR1I3-216ENST00000502848 RNASEK-C17orf49H0YIS7 233 aa7.34□□□□□ -1.23
NR1I3-216ENST00000502848 SCGB1D2O95969 90 aa7.34□□□□□ -1.23
NR1I3-216ENST00000502848 ARG1P05089 322 aa7.34□□□□□ -1.23
NR1I3-216ENST00000502848 MAS1LP35410 378 aa7.34□□□□□ -1.23
NR1I3-216ENST00000502848 DYNLT3P51808 116 aa7.34□□□□□ -1.23
NR1I3-216ENST00000502848 LGALS4P56470 323 aa7.34□□□□□ -1.23
NR1I3-216ENST00000502848 UBE2KP61086 200 aa7.34□□□□□ -1.23
NR1I3-216ENST00000502848 UBA52P62987 128 aaKnown RBP7.34□□□□□ -1.23
NR1I3-216ENST00000502848 VAMP2P63027 116 aa7.34□□□□□ -1.23
NR1I3-216ENST00000502848 PRR20EP86478 221 aa7.34□□□□□ -1.23
NR1I3-216ENST00000502848 PRR20CP86479 221 aa7.34□□□□□ -1.23
NR1I3-216ENST00000502848 PRR20DP86480 221 aa7.34□□□□□ -1.23
NR1I3-216ENST00000502848 PRR20BP86481 221 aa7.34□□□□□ -1.23
NR1I3-216ENST00000502848 PRR20AP86496 221 aa7.34□□□□□ -1.23
NR1I3-216ENST00000502848 RELBQ01201 579 aa7.34□□□□□ -1.23
NR1I3-216ENST00000502848 OPCMLQ14982 345 aa7.34□□□□□ -1.23
NR1I3-216ENST00000502848 VMA21Q3ZAQ7 101 aa7.34□□□□□ -1.23
NR1I3-216ENST00000502848 OR2B11Q5JQS5 317 aa7.34□□□□□ -1.23
NR1I3-216ENST00000502848 CXorf66Q5JRM2 361 aaPredicted RBP7.34□□□□□ -1.23
NR1I3-216ENST00000502848 OR4A47Q6IF82 309 aa7.34□□□□□ -1.23
NR1I3-216ENST00000502848 Q6ZRM9 215 aa7.34□□□□□ -1.23
NR1I3-216ENST00000502848 OR2C3Q8N628 320 aa7.34□□□□□ -1.23
NR1I3-216ENST00000502848 LINC01356Q8N9X3 169 aa7.34□□□□□ -1.23
NR1I3-216ENST00000502848 TEX45Q8NA69 505 aa7.34□□□□□ -1.23
NR1I3-216ENST00000502848 OR4A16Q8NH70 328 aa7.34□□□□□ -1.23
NR1I3-216ENST00000502848 STOML3Q8TAV4 291 aa7.34□□□□□ -1.23
NR1I3-216ENST00000502848 TMEM167AQ8TBQ9 72 aa7.34□□□□□ -1.23
NR1I3-216ENST00000502848 TBX15Q96SF7 602 aa7.34□□□□□ -1.23
NR1I3-216ENST00000502848 ARPC5LQ9BPX5 153 aa7.34□□□□□ -1.23
NR1I3-216ENST00000502848 SIRT7Q9NRC8 400 aa7.34□□□□□ -1.23
NR1I3-216ENST00000502848 TMEM140Q9NV12 185 aa7.34□□□□□ -1.23
NR1I3-216ENST00000502848 LSM5Q9Y4Y9 91 aaKnown RBP7.34□□□□□ -1.23
NR1I3-216ENST00000502848 USF3Q68DE3 2245 aa7.33□□□□□ -1.24
NR1I3-216ENST00000502848 H7C2Y5 167 aa7.33□□□□□ -1.24
NR1I3-216ENST00000502848 SHOXO15266 292 aa7.33□□□□□ -1.24
NR1I3-216ENST00000502848 JTBO76095 146 aa7.33□□□□□ -1.24
NR1I3-216ENST00000502848 KBTBD11O94819 623 aa7.33□□□□□ -1.24
NR1I3-216ENST00000502848 IFNA7P01567 189 aa7.33□□□□□ -1.24
NR1I3-216ENST00000502848 IGKV1-16P04430 117 aa7.33□□□□□ -1.24
NR1I3-216ENST00000502848 HKR1P10072 659 aa7.33□□□□□ -1.24
NR1I3-216ENST00000502848 COX7A1P24310 79 aa7.33□□□□□ -1.24
NR1I3-216ENST00000502848 COL8A1P27658 744 aa7.33□□□□□ -1.24
NR1I3-216ENST00000502848 AP2S1P53680 142 aaPredicted RBP7.33□□□□□ -1.24
NR1I3-216ENST00000502848 POLR2GP62487 172 aaKnown RBP eCLIP7.33□□□□□ -1.24
NR1I3-216ENST00000502848 RPP30P78346 268 aaKnown RBP7.33□□□□□ -1.24
NR1I3-216ENST00000502848 EBI3Q14213 229 aa7.33□□□□□ -1.24
NR1I3-216ENST00000502848 STX12Q86Y82 276 aa7.33□□□□□ -1.24
NR1I3-216ENST00000502848 THNSL2Q86YJ6 484 aa7.33□□□□□ -1.24
NR1I3-216ENST00000502848 MRPL41Q8IXM3 137 aaKnown RBP7.33□□□□□ -1.24
NR1I3-216ENST00000502848 TEX29Q8N6K0 151 aa7.33□□□□□ -1.24
NR1I3-216ENST00000502848 OR8H1Q8NGG4 311 aa7.33□□□□□ -1.24
NR1I3-216ENST00000502848 CLCC1Q96S66 551 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms