RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 ANKRD7Q92527 254 aa3□□□□□ -1.93
HMGB1P3-201ENST00000502802 RMI2Q96E14 147 aa3□□□□□ -1.93
HMGB1P3-201ENST00000502802 ANKRD36BP1Q96IX9 119 aa3□□□□□ -1.93
HMGB1P3-201ENST00000502802 TXNIPQ9H3M7 391 aa3□□□□□ -1.93
HMGB1P3-201ENST00000502802 EMC3Q9P0I2 261 aa3□□□□□ -1.93
HMGB1P3-201ENST00000502802 V9GYY5 206 aaPredicted RBP3□□□□□ -1.93
HMGB1P3-201ENST00000502802 MUC22E2RYF6 1773 aaPredicted RBP3□□□□□ -1.93
HMGB1P3-201ENST00000502802 APC2O95996 2303 aa2.99□□□□□ -1.93
HMGB1P3-201ENST00000502802 SMG1Q96Q15 3661 aaKnown RBP2.99□□□□□ -1.93
HMGB1P3-201ENST00000502802 URB1O60287 2271 aaKnown RBP2.99□□□□□ -1.93
HMGB1P3-201ENST00000502802 A0A1W2PNU3 283 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P3-201ENST00000502802 OR6C70A6NIJ9 312 aa2.99□□□□□ -1.93
HMGB1P3-201ENST00000502802 GOLGA6L19H0YKK7 550 aa2.99□□□□□ -1.93
HMGB1P3-201ENST00000502802 KLRC4O43908 158 aa2.99□□□□□ -1.93
HMGB1P3-201ENST00000502802 S100A2P29034 98 aa2.99□□□□□ -1.93
HMGB1P3-201ENST00000502802 COILP38432 576 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P3-201ENST00000502802 INPP1P49441 399 aa2.99□□□□□ -1.93
HMGB1P3-201ENST00000502802 ARPC4P59998 168 aa2.99□□□□□ -1.93
HMGB1P3-201ENST00000502802 MYL6P60660 151 aa2.99□□□□□ -1.93
HMGB1P3-201ENST00000502802 UBE2IP63279 158 aaKnown RBP2.99□□□□□ -1.93
HMGB1P3-201ENST00000502802 HLA-DRB5Q30154 266 aa2.99□□□□□ -1.93
HMGB1P3-201ENST00000502802 N4BP2L1Q5TBK1 243 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P3-201ENST00000502802 LAIR2Q6ISS4 152 aa2.99□□□□□ -1.93
HMGB1P3-201ENST00000502802 SPNS3Q6ZMD2 512 aa2.99□□□□□ -1.93
HMGB1P3-201ENST00000502802 OR5D18Q8NGL1 313 aa2.99□□□□□ -1.93
HMGB1P3-201ENST00000502802 MAL2Q969L2 176 aa2.99□□□□□ -1.93
HMGB1P3-201ENST00000502802 TAMM41Q96BW9 452 aa2.99□□□□□ -1.93
HMGB1P3-201ENST00000502802 REEP6Q96HR9 211 aa2.99□□□□□ -1.93
HMGB1P3-201ENST00000502802 TP53TG1Q9Y2A0 90 aa2.99□□□□□ -1.93
HMGB1P3-201ENST00000502802 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.99□□□□□ -1.93
HMGB1P3-201ENST00000502802 TRAPPC1Q9Y5R8 145 aa2.99□□□□□ -1.93
HMGB1P3-201ENST00000502802 BOD1L1Q8NFC6 3051 aa2.99□□□□□ -1.93
HMGB1P3-201ENST00000502802 TRPM6Q9BX84 2022 aa2.98□□□□□ -1.93
HMGB1P3-201ENST00000502802 YLPM1P49750 1951 aaKnown RBP2.98□□□□□ -1.93
HMGB1P3-201ENST00000502802 CHD5Q8TDI0 1954 aa2.98□□□□□ -1.93
HMGB1P3-201ENST00000502802 PVALEFA0A1B0GWK0 134 aa2.98□□□□□ -1.93
HMGB1P3-201ENST00000502802 FAM92AA1XBS5 289 aa2.98□□□□□ -1.93
HMGB1P3-201ENST00000502802 ZW10O43264 779 aa2.98□□□□□ -1.93
HMGB1P3-201ENST00000502802 IGHG2P01859 326 aa2.98□□□□□ -1.93
HMGB1P3-201ENST00000502802 TRGV3P03979 118 aa2.98□□□□□ -1.93
HMGB1P3-201ENST00000502802 PFN1P07737 140 aaKnown RBP2.98□□□□□ -1.93
HMGB1P3-201ENST00000502802 GABRA1P14867 456 aa2.98□□□□□ -1.93
HMGB1P3-201ENST00000502802 SNRPFP62306 86 aaKnown RBP2.98□□□□□ -1.93
HMGB1P3-201ENST00000502802 C4orf26Q17RF5 130 aa2.98□□□□□ -1.93
HMGB1P3-201ENST00000502802 RGS21Q2M5E4 152 aa2.98□□□□□ -1.93
HMGB1P3-201ENST00000502802 ZFAND6Q6FIF0 208 aa2.98□□□□□ -1.93
HMGB1P3-201ENST00000502802 SPOPLQ6IQ16 392 aa2.98□□□□□ -1.93
HMGB1P3-201ENST00000502802 DNM1P34Q6PK57 102 aa2.98□□□□□ -1.93
HMGB1P3-201ENST00000502802 VN1R4Q7Z5H5 301 aa2.98□□□□□ -1.93
HMGB1P3-201ENST00000502802 C12orf29Q8N999 325 aa2.98□□□□□ -1.93
HMGB1P3-201ENST00000502802 TSTD1Q8NFU3 115 aa2.98□□□□□ -1.93
HMGB1P3-201ENST00000502802 CMTM5Q96DZ9 223 aa2.98□□□□□ -1.93
HMGB1P3-201ENST00000502802 TMEM208Q9BTX3 173 aa2.98□□□□□ -1.93
HMGB1P3-201ENST00000502802 FKBP14Q9NWM8 211 aa2.98□□□□□ -1.93
HMGB1P3-201ENST00000502802 ZNF586Q9NXT0 402 aa2.98□□□□□ -1.93
HMGB1P3-201ENST00000502802 DHCR7Q9UBM7 475 aaKnown RBP2.98□□□□□ -1.93
HMGB1P3-201ENST00000502802 RP1P56715 2156 aa2.98□□□□□ -1.93
HMGB1P3-201ENST00000502802 COL12A1Q99715 3063 aa2.98□□□□□ -1.93
HMGB1P3-201ENST00000502802 CFAP46Q8IYW2 2715 aa2.98□□□□□ -1.93
HMGB1P3-201ENST00000502802 SETXQ7Z333 2677 aaKnown RBP2.97□□□□□ -1.93
HMGB1P3-201ENST00000502802 ANKRD36A6QL64 1941 aa2.97□□□□□ -1.93
HMGB1P3-201ENST00000502802 PSMG1O95456 288 aa2.97□□□□□ -1.93
HMGB1P3-201ENST00000502802 HLA-DRAP01903 254 aa2.97□□□□□ -1.93
HMGB1P3-201ENST00000502802 APODP05090 189 aa2.97□□□□□ -1.93
HMGB1P3-201ENST00000502802 RPSAP08865 295 aaKnown RBP2.97□□□□□ -1.93
HMGB1P3-201ENST00000502802 ZNF14P17017 642 aaPredicted RBP2.97□□□□□ -1.93
HMGB1P3-201ENST00000502802 MAGEA2P43356 314 aa2.97□□□□□ -1.93
HMGB1P3-201ENST00000502802 CDC34P49427 236 aaPredicted RBP2.97□□□□□ -1.93
HMGB1P3-201ENST00000502802 CASP8Q14790 479 aa2.97□□□□□ -1.93
HMGB1P3-201ENST00000502802 MMDQ15546 238 aa2.97□□□□□ -1.93
HMGB1P3-201ENST00000502802 SLC36A2Q495M3 483 aa2.97□□□□□ -1.93
HMGB1P3-201ENST00000502802 KRTAP13-2Q52LG2 175 aa2.97□□□□□ -1.93
HMGB1P3-201ENST00000502802 CENPWQ5EE01 88 aa2.97□□□□□ -1.93
HMGB1P3-201ENST00000502802 CDKL4Q5MAI5 379 aa2.97□□□□□ -1.93
HMGB1P3-201ENST00000502802 PTRHD1Q6GMV3 140 aaKnown RBP2.97□□□□□ -1.93
HMGB1P3-201ENST00000502802 IGFL1Q6UW32 110 aa2.97□□□□□ -1.93
HMGB1P3-201ENST00000502802 RIBC1Q8N443 379 aaPredicted RBP2.97□□□□□ -1.93
HMGB1P3-201ENST00000502802 TMEM156Q8N614 296 aa2.97□□□□□ -1.93
HMGB1P3-201ENST00000502802 DEFB119Q8N690 84 aa2.97□□□□□ -1.93
HMGB1P3-201ENST00000502802 OR9I1Q8NGQ6 314 aa2.97□□□□□ -1.93
HMGB1P3-201ENST00000502802 OTUB2Q96DC9 234 aa2.97□□□□□ -1.93
HMGB1P3-201ENST00000502802 SMIM19Q96E16 107 aa2.97□□□□□ -1.93
HMGB1P3-201ENST00000502802 PYURFQ96I23 114 aa2.97□□□□□ -1.93
HMGB1P3-201ENST00000502802 GABARAPL1Q9H0R8 117 aa2.97□□□□□ -1.93
HMGB1P3-201ENST00000502802 CENPHQ9H3R5 247 aa2.97□□□□□ -1.93
HMGB1P3-201ENST00000502802 LRRC19Q9H756 370 aa2.97□□□□□ -1.93
HMGB1P3-201ENST00000502802 UCK1Q9HA47 277 aa2.97□□□□□ -1.93
HMGB1P3-201ENST00000502802 USE1Q9NZ43 259 aa2.97□□□□□ -1.93
HMGB1P3-201ENST00000502802 TMEM216Q9P0N5 145 aa2.97□□□□□ -1.93
HMGB1P3-201ENST00000502802 MARCOQ9UEW3 520 aaPredicted RBP2.97□□□□□ -1.93
HMGB1P3-201ENST00000502802 ICOSQ9Y6W8 199 aa2.97□□□□□ -1.93
HMGB1P3-201ENST00000502802 COL5A1P20908 1838 aaPredicted RBP2.97□□□□□ -1.93
HMGB1P3-201ENST00000502802 TENM4Q6N022 2769 aa2.97□□□□□ -1.93
HMGB1P3-201ENST00000502802 HELZ2Q9BYK8 2649 aaKnown RBP2.97□□□□□ -1.93
HMGB1P3-201ENST00000502802 PTPRQQ9UMZ3 2332 aa2.97□□□□□ -1.93
HMGB1P3-201ENST00000502802 UNC13CQ8NB66 2214 aa2.96□□□□□ -1.94
HMGB1P3-201ENST00000502802 IGKV1OR2-108A0A075B7D4 117 aa2.96□□□□□ -1.94
HMGB1P3-201ENST00000502802 OR5H14A6NHG9 310 aa2.96□□□□□ -1.94
HMGB1P3-201ENST00000502802 METTL15A6NJ78 407 aa2.96□□□□□ -1.94
HMGB1P3-201ENST00000502802 ARGFXA6NJG6 315 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms