RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 IGHV1-69-2A0A0G2JMI3 117 aa5.73□□□□□ -1.49
USP39-219ENST00000496047 A0A0G2JRQ6 117 aa5.73□□□□□ -1.49
USP39-219ENST00000496047 hCG_1809904A0A1W2PP81 198 aa5.73□□□□□ -1.49
USP39-219ENST00000496047 A0A1W2PPE2 198 aa5.73□□□□□ -1.49
USP39-219ENST00000496047 A0A1W2PR64 198 aa5.73□□□□□ -1.49
USP39-219ENST00000496047 A0A1W2PRV1 198 aa5.73□□□□□ -1.49
USP39-219ENST00000496047 SHISA9B4DS77 424 aa5.73□□□□□ -1.49
USP39-219ENST00000496047 H3BP45 60 aa5.73□□□□□ -1.49
USP39-219ENST00000496047 CST7O76096 145 aa5.73□□□□□ -1.49
USP39-219ENST00000496047 IFNA17P01571 189 aa5.73□□□□□ -1.49
USP39-219ENST00000496047 IGKV1-39P01597 117 aa5.73□□□□□ -1.49
USP39-219ENST00000496047 MBP02144 154 aa5.73□□□□□ -1.49
USP39-219ENST00000496047 IGKV1D-39P04432 117 aa5.73□□□□□ -1.49
USP39-219ENST00000496047 METTL15P1P0C7V9 234 aa5.73□□□□□ -1.49
USP39-219ENST00000496047 FAM157CP0CG43 387 aa5.73□□□□□ -1.49
USP39-219ENST00000496047 ATP6V0CP27449 155 aa5.73□□□□□ -1.49
USP39-219ENST00000496047 HOXA1P49639 335 aaPredicted RBP5.73□□□□□ -1.49
USP39-219ENST00000496047 PPOXP50336 477 aa5.73□□□□□ -1.49
USP39-219ENST00000496047 DVL1P1P54792 670 aaPredicted RBP5.73□□□□□ -1.49
USP39-219ENST00000496047 RPL31P62899 125 aaKnown RBP5.73□□□□□ -1.49
USP39-219ENST00000496047 MRPS11P82912 194 aaKnown RBP5.73□□□□□ -1.49
USP39-219ENST00000496047 SERF2P84101 59 aa5.73□□□□□ -1.49
USP39-219ENST00000496047 SLC38A11Q08AI6 406 aa5.73□□□□□ -1.49
USP39-219ENST00000496047 EIF4EBP1Q13541 118 aaPredicted RBP5.73□□□□□ -1.49
USP39-219ENST00000496047 SPANXN5Q5MJ07 72 aa5.73□□□□□ -1.49
USP39-219ENST00000496047 CDPF1Q6NVV7 123 aa5.73□□□□□ -1.49
USP39-219ENST00000496047 FAM71F2Q6NXP2 309 aa5.73□□□□□ -1.49
USP39-219ENST00000496047 LYG1Q8N1E2 194 aa5.73□□□□□ -1.49
USP39-219ENST00000496047 MUC15Q8N387 334 aa5.73□□□□□ -1.49
USP39-219ENST00000496047 FAM216BQ8N7L0 139 aa5.73□□□□□ -1.49
USP39-219ENST00000496047 ZNF709Q8N972 641 aa5.73□□□□□ -1.49
USP39-219ENST00000496047 BPIFCQ8NFQ6 507 aa5.73□□□□□ -1.49
USP39-219ENST00000496047 OR52E5Q8NH55 327 aa5.73□□□□□ -1.49
USP39-219ENST00000496047 CCL17Q92583 94 aa5.73□□□□□ -1.49
USP39-219ENST00000496047 RBMXL1Q96E39 390 aaKnown RBP5.73□□□□□ -1.49
USP39-219ENST00000496047 TIMD4Q96H15 378 aa5.73□□□□□ -1.49
USP39-219ENST00000496047 PSMG3Q9BT73 122 aaPredicted RBP5.73□□□□□ -1.49
USP39-219ENST00000496047 TMEM147Q9BVK8 224 aa5.73□□□□□ -1.49
USP39-219ENST00000496047 SEC11CQ9BY50 192 aa5.73□□□□□ -1.49
USP39-219ENST00000496047 KRTAP9-9Q9BYP9 154 aa5.73□□□□□ -1.49
USP39-219ENST00000496047 KRTAP9-4Q9BYQ2 154 aa5.73□□□□□ -1.49
USP39-219ENST00000496047 NKX6-2Q9C056 277 aaPredicted RBP5.73□□□□□ -1.49
USP39-219ENST00000496047 EIF5A2Q9GZV4 153 aaKnown RBP5.73□□□□□ -1.49
USP39-219ENST00000496047 PARP12Q9H0J9 701 aaKnown RBP5.73□□□□□ -1.49
USP39-219ENST00000496047 RAB1BQ9H0U4 201 aa5.73□□□□□ -1.49
USP39-219ENST00000496047 RBKSQ9H477 322 aa5.73□□□□□ -1.49
USP39-219ENST00000496047 FKBP11Q9NYL4 201 aa5.73□□□□□ -1.49
USP39-219ENST00000496047 CISD1Q9NZ45 108 aaKnown RBP5.73□□□□□ -1.49
USP39-219ENST00000496047 KAAG1Q9UBP8 84 aa5.73□□□□□ -1.49
USP39-219ENST00000496047 TIMM9Q9Y5J7 89 aa5.73□□□□□ -1.49
USP39-219ENST00000496047 FREM2Q5SZK8 3169 aa5.73□□□□□ -1.49
USP39-219ENST00000496047 RP1L1Q8IWN7 2480 aaPredicted RBP5.72□□□□□ -1.49
USP39-219ENST00000496047 TMEM218A2RU14 115 aa5.72□□□□□ -1.49
USP39-219ENST00000496047 C17orf98A8MV24 154 aa5.72□□□□□ -1.49
USP39-219ENST00000496047 E7EQL1 145 aa5.72□□□□□ -1.49
USP39-219ENST00000496047 ZG16O60844 167 aa5.72□□□□□ -1.49
USP39-219ENST00000496047 TFF1P04155 84 aa5.72□□□□□ -1.49
USP39-219ENST00000496047 H2AFB1P0C5Y9 115 aa5.72□□□□□ -1.49
USP39-219ENST00000496047 GNG10P50151 68 aa5.72□□□□□ -1.49
USP39-219ENST00000496047 RAB13P51153 203 aa5.72□□□□□ -1.49
USP39-219ENST00000496047 LOXL3P58215 753 aa5.72□□□□□ -1.49
USP39-219ENST00000496047 SPCS3P61009 180 aa5.72□□□□□ -1.49
USP39-219ENST00000496047 ZNF672Q499Z4 452 aaPredicted RBP5.72□□□□□ -1.49
USP39-219ENST00000496047 OR8G2PQ6IF36 304 aa5.72□□□□□ -1.49
USP39-219ENST00000496047 BTNL8Q6UX41 500 aa5.72□□□□□ -1.49
USP39-219ENST00000496047 VSTM2AQ8TAG5 236 aa5.72□□□□□ -1.49
USP39-219ENST00000496047 AGMATQ9BSE5 352 aa5.72□□□□□ -1.49
USP39-219ENST00000496047 DCTN5Q9BTE1 182 aa5.72□□□□□ -1.49
USP39-219ENST00000496047 IFI27L2Q9H2X8 130 aa5.72□□□□□ -1.49
USP39-219ENST00000496047 NARFLQ9H6Q4 476 aa5.72□□□□□ -1.49
USP39-219ENST00000496047 SLC35D1Q9NTN3 355 aa5.72□□□□□ -1.49
USP39-219ENST00000496047 UQCC1Q9NVA1 299 aa5.72□□□□□ -1.49
USP39-219ENST00000496047 RPUSD1Q9UJJ7 312 aaKnown RBP5.72□□□□□ -1.49
USP39-219ENST00000496047 AMMECR1Q9Y4X0 333 aaPredicted RBP5.72□□□□□ -1.49
USP39-219ENST00000496047 SAA2-SAA4A0A096LPE2 208 aa5.71□□□□□ -1.5
USP39-219ENST00000496047 UBE2L5PA0A1B0GUS4 154 aa5.71□□□□□ -1.5
USP39-219ENST00000496047 LINC00473A8K010 186 aa5.71□□□□□ -1.5
USP39-219ENST00000496047 RNASEK-C17orf49H0YIS7 233 aa5.71□□□□□ -1.5
USP39-219ENST00000496047 RAMP3O60896 148 aa5.71□□□□□ -1.5
USP39-219ENST00000496047 MPDU1O75352 247 aa5.71□□□□□ -1.5
USP39-219ENST00000496047 FSTL3O95633 263 aa5.71□□□□□ -1.5
USP39-219ENST00000496047 SAA2P0DJI9 122 aaPredicted RBP5.71□□□□□ -1.5
USP39-219ENST00000496047 CGB3P0DN86 165 aa5.71□□□□□ -1.5
USP39-219ENST00000496047 CGB7P0DN87 165 aa5.71□□□□□ -1.5
USP39-219ENST00000496047 TAGLN2P37802 199 aaKnown RBP5.71□□□□□ -1.5
USP39-219ENST00000496047 SNCAP37840 140 aa5.71□□□□□ -1.5
USP39-219ENST00000496047 OR2B8PP59922 312 aa5.71□□□□□ -1.5
USP39-219ENST00000496047 RPL30P62888 115 aaKnown RBP5.71□□□□□ -1.5
USP39-219ENST00000496047 GUK1Q16774 197 aa5.71□□□□□ -1.5
USP39-219ENST00000496047 C17orf58Q2M2W7 97 aa5.71□□□□□ -1.5
USP39-219ENST00000496047 SPRNQ5BIV9 151 aa5.71□□□□□ -1.5
USP39-219ENST00000496047 FAM201AQ5SY85 155 aa5.71□□□□□ -1.5
USP39-219ENST00000496047 NCR3LG1Q68D85 454 aa5.71□□□□□ -1.5
USP39-219ENST00000496047 CLEC9AQ6UXN8 241 aa5.71□□□□□ -1.5
USP39-219ENST00000496047 TMEM14EPQ6UXP3 125 aa5.71□□□□□ -1.5
USP39-219ENST00000496047 HEPN1Q6WQI6 88 aa5.71□□□□□ -1.5
USP39-219ENST00000496047 SLC25A48Q6ZT89 311 aaKnown RBP5.71□□□□□ -1.5
USP39-219ENST00000496047 THNSL2Q86YJ6 484 aa5.71□□□□□ -1.5
USP39-219ENST00000496047 ZNF525Q8N782 197 aa5.71□□□□□ -1.5
USP39-219ENST00000496047 C8orf31Q8N9H6 132 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms