RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 P2RY6Q15077 328 aa11.27□□□□□ -0.61
GPC1-209ENST00000495100 FAM216BQ8N7L0 139 aa11.27□□□□□ -0.61
GPC1-209ENST00000495100 SARAFQ96BY9 339 aa11.27□□□□□ -0.61
GPC1-209ENST00000495100 FTH1P19P0C7X4 201 aa11.26□□□□□ -0.61
GPC1-209ENST00000495100 G0S2P27469 103 aa11.26□□□□□ -0.61
GPC1-209ENST00000495100 ZNF90Q03938 601 aa11.26□□□□□ -0.61
GPC1-209ENST00000495100 SAMD10Q9BYL1 202 aa11.26□□□□□ -0.61
GPC1-209ENST00000495100 C1QTNF9P0C862 333 aa11.26□□□□□ -0.61
GPC1-209ENST00000495100 NTF3P20783 257 aa11.26□□□□□ -0.61
GPC1-209ENST00000495100 DAZAP2Q15038 168 aaPredicted RBP11.26□□□□□ -0.61
GPC1-209ENST00000495100 CISD2Q8N5K1 135 aaKnown RBP11.26□□□□□ -0.61
GPC1-209ENST00000495100 ASH1LQ9NR48 2969 aaKnown RBP11.26□□□□□ -0.61
GPC1-209ENST00000495100 LOC102723971A0A1B0GUV8 181 aa11.26□□□□□ -0.61
GPC1-209ENST00000495100 MDFIC2A0A1B0GVS7 189 aa11.26□□□□□ -0.61
GPC1-209ENST00000495100 C21orf140B9A014 251 aa11.26□□□□□ -0.61
GPC1-209ENST00000495100 RRHO14718 337 aa11.26□□□□□ -0.61
GPC1-209ENST00000495100 OR5G3P0C626 314 aa11.26□□□□□ -0.61
GPC1-209ENST00000495100 IL36GQ9NZH8 169 aa11.26□□□□□ -0.61
GPC1-209ENST00000495100 KIAA1549Q9HCM3 1950 aa11.25□□□□□ -0.61
GPC1-209ENST00000495100 LRRC30A6NM36 301 aa11.25□□□□□ -0.61
GPC1-209ENST00000495100 SLC31A2O15432 143 aa11.25□□□□□ -0.61
GPC1-209ENST00000495100 OR9G9P0C7N8 305 aa11.25□□□□□ -0.61
GPC1-209ENST00000495100 IGFBPL1Q8WX77 278 aa11.25□□□□□ -0.61
GPC1-209ENST00000495100 TCEAL7Q9BRU2 100 aa11.25□□□□□ -0.61
GPC1-209ENST00000495100 MYO9AB2RTY4 2548 aa11.25□□□□□ -0.61
GPC1-209ENST00000495100 OOEPA6NGQ2 149 aa11.25□□□□□ -0.61
GPC1-209ENST00000495100 Q6P435 159 aa11.25□□□□□ -0.61
GPC1-209ENST00000495100 HEPN1Q6WQI6 88 aa11.25□□□□□ -0.61
GPC1-209ENST00000495100 LRTM2Q8N967 370 aa11.25□□□□□ -0.61
GPC1-209ENST00000495100 ABHD5Q8WTS1 349 aa11.25□□□□□ -0.61
GPC1-209ENST00000495100 SPSB4Q96A44 273 aa11.25□□□□□ -0.61
GPC1-209ENST00000495100 GMPPAQ96IJ6 420 aaPredicted RBP11.25□□□□□ -0.61
GPC1-209ENST00000495100 WIPI2Q9Y4P8 454 aa11.25□□□□□ -0.61
GPC1-209ENST00000495100 LRBAP50851 2863 aa11.25□□□□□ -0.61
GPC1-209ENST00000495100 CD1BP29016 333 aa11.25□□□□□ -0.61
GPC1-209ENST00000495100 OR5I1Q13606 314 aa11.25□□□□□ -0.61
GPC1-209ENST00000495100 WDR82Q6UXN9 313 aa11.25□□□□□ -0.61
GPC1-209ENST00000495100 ZNF705AQ6ZN79 300 aaPredicted RBP11.25□□□□□ -0.61
GPC1-209ENST00000495100 SLC35E3Q7Z769 313 aa11.25□□□□□ -0.61
GPC1-209ENST00000495100 BAGE3Q86Y29 109 aa11.25□□□□□ -0.61
GPC1-209ENST00000495100 BAGE2Q86Y30 109 aa11.25□□□□□ -0.61
GPC1-209ENST00000495100 ZADH2Q8N4Q0 377 aa11.25□□□□□ -0.61
GPC1-209ENST00000495100 OR8G5Q8NG78 346 aa11.25□□□□□ -0.61
GPC1-209ENST00000495100 SGMS2Q8NHU3 365 aa11.25□□□□□ -0.61
GPC1-209ENST00000495100 PPP1R35Q8TAP8 253 aa11.25□□□□□ -0.61
GPC1-209ENST00000495100 COQ2Q96H96 371 aa11.25□□□□□ -0.61
GPC1-209ENST00000495100 TMEM147Q9BVK8 224 aa11.25□□□□□ -0.61
GPC1-209ENST00000495100 CXXC4Q9H2H0 198 aa11.25□□□□□ -0.61
GPC1-209ENST00000495100 PLSCR2Q9NRY7 297 aa11.25□□□□□ -0.61
GPC1-209ENST00000495100 POLQO75417 2590 aa11.24□□□□□ -0.61
GPC1-209ENST00000495100 NDUFA2O43678 99 aa11.24□□□□□ -0.61
GPC1-209ENST00000495100 ARL14EPLP0DKL9 152 aa11.24□□□□□ -0.61
GPC1-209ENST00000495100 HTD2P86397 168 aa11.24□□□□□ -0.61
GPC1-209ENST00000495100 CYB5R2Q6BCY4 276 aa11.24□□□□□ -0.61
GPC1-209ENST00000495100 COLCA1Q6ZS62 124 aa11.24□□□□□ -0.61
GPC1-209ENST00000495100 MRGPRGQ86SM5 289 aa11.24□□□□□ -0.61
GPC1-209ENST00000495100 OR10A7Q8NGE5 316 aa11.24□□□□□ -0.61
GPC1-209ENST00000495100 BLNKQ8WV28 456 aa11.24□□□□□ -0.61
GPC1-209ENST00000495100 TPPP3Q9BW30 176 aa11.24□□□□□ -0.61
GPC1-209ENST00000495100 RNF115Q9Y4L5 304 aa11.24□□□□□ -0.61
GPC1-209ENST00000495100 DYSFO75923 2080 aa11.24□□□□□ -0.61
GPC1-209ENST00000495100 TRAV17A0A0B4J275 112 aa11.24□□□□□ -0.61
GPC1-209ENST00000495100 C17orf112F2Z3M2 114 aa11.24□□□□□ -0.61
GPC1-209ENST00000495100 ERVFC1-1P60608 527 aa11.24□□□□□ -0.61
GPC1-209ENST00000495100 SPATA31B1PQ5VZV4 182 aa11.24□□□□□ -0.61
GPC1-209ENST00000495100 ZNF497Q6ZNH5 498 aa11.24□□□□□ -0.61
GPC1-209ENST00000495100 TMEM45BQ96B21 275 aa11.24□□□□□ -0.61
GPC1-209ENST00000495100 ZDHHC11Q9H8X9 412 aa11.24□□□□□ -0.61
GPC1-209ENST00000495100 DYNLRB1Q9NP97 96 aa11.24□□□□□ -0.61
GPC1-209ENST00000495100 MYO18BQ8IUG5 2567 aa11.24□□□□□ -0.61
GPC1-209ENST00000495100 TRAV34A0A0B4J273 112 aa11.23□□□□□ -0.61
GPC1-209ENST00000495100 TSTD3H0UI37 97 aa11.23□□□□□ -0.61
GPC1-209ENST00000495100 GABRA6Q16445 453 aa11.23□□□□□ -0.61
GPC1-209ENST00000495100 STUMQ69YW2 141 aa11.23□□□□□ -0.61
GPC1-209ENST00000495100 MRPL54Q6P161 138 aaKnown RBP11.23□□□□□ -0.61
GPC1-209ENST00000495100 ASCL4Q6XD76 172 aa11.23□□□□□ -0.61
GPC1-209ENST00000495100 BHLHA15Q7RTS1 189 aaPredicted RBP11.23□□□□□ -0.61
GPC1-209ENST00000495100 ODF3L1Q8IXM7 274 aa11.23□□□□□ -0.61
GPC1-209ENST00000495100 ZNF645Q8N7E2 425 aa11.23□□□□□ -0.61
GPC1-209ENST00000495100 TUBG2Q9NRH3 451 aa11.23□□□□□ -0.61
GPC1-209ENST00000495100 TRAPPC1Q9Y5R8 145 aa11.23□□□□□ -0.61
GPC1-209ENST00000495100 BTBD17A6NE02 478 aa11.23□□□□□ -0.61
GPC1-209ENST00000495100 F6UZH7 168 aa11.23□□□□□ -0.61
GPC1-209ENST00000495100 RNF224P0DH78 156 aa11.23□□□□□ -0.61
GPC1-209ENST00000495100 SMIM6P0DI80 62 aa11.23□□□□□ -0.61
GPC1-209ENST00000495100 B2MP61769 119 aa11.23□□□□□ -0.61
GPC1-209ENST00000495100 MRPS11P82912 194 aaKnown RBP11.23□□□□□ -0.61
GPC1-209ENST00000495100 TNFAIP6P98066 277 aaPredicted RBP11.23□□□□□ -0.61
GPC1-209ENST00000495100 PSG5Q15238 335 aa11.23□□□□□ -0.61
GPC1-209ENST00000495100 ACOT6Q3I5F7 207 aaPredicted RBP11.23□□□□□ -0.61
GPC1-209ENST00000495100 ACP7Q6ZNF0 438 aa11.23□□□□□ -0.61
GPC1-209ENST00000495100 Q8IYB0 196 aa11.23□□□□□ -0.61
GPC1-209ENST00000495100 AGAP20933 346 aa11.23□□□□□ -0.61
GPC1-209ENST00000495100 KLF3P57682 345 aaPredicted RBP11.23□□□□□ -0.61
GPC1-209ENST00000495100 PLGLAQ15195 96 aa11.23□□□□□ -0.61
GPC1-209ENST00000495100 ZNF506Q5JVG8 444 aa11.23□□□□□ -0.61
GPC1-209ENST00000495100 C1QL4Q86Z23 238 aa11.23□□□□□ -0.61
GPC1-209ENST00000495100 NEIL1Q96FI4 390 aaPredicted RBP11.23□□□□□ -0.61
GPC1-209ENST00000495100 ATG101Q9BSB4 218 aa11.23□□□□□ -0.61
GPC1-209ENST00000495100 NPCDR1Q9BY65 106 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms