RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 PGA3P0DJD8 388 aa2.72□□□□□ -1.97
ECHDC1-217ENST00000488087 PGA5P0DJD9 388 aa2.72□□□□□ -1.97
ECHDC1-217ENST00000488087 SMIM17P0DL12 118 aa2.72□□□□□ -1.97
ECHDC1-217ENST00000488087 PPIAL4FP0DN26 164 aa2.72□□□□□ -1.97
ECHDC1-217ENST00000488087 KCNE1P15382 129 aa2.72□□□□□ -1.97
ECHDC1-217ENST00000488087 ANK1P16157 1881 aa2.72□□□□□ -1.97
ECHDC1-217ENST00000488087 CSNK2A2P19784 350 aaPredicted RBP2.72□□□□□ -1.97
ECHDC1-217ENST00000488087 AZU1P20160 251 aa2.72□□□□□ -1.97
ECHDC1-217ENST00000488087 CDK2P24941 298 aa2.72□□□□□ -1.97
ECHDC1-217ENST00000488087 PRSS3P35030 304 aa2.72□□□□□ -1.97
ECHDC1-217ENST00000488087 DRD3P35462 400 aa2.72□□□□□ -1.97
ECHDC1-217ENST00000488087 CTRLP40313 264 aa2.72□□□□□ -1.97
ECHDC1-217ENST00000488087 AQP2P41181 271 aa2.72□□□□□ -1.97
ECHDC1-217ENST00000488087 OR1E2P47887 323 aa2.72□□□□□ -1.97
ECHDC1-217ENST00000488087 LGALS7P47929 136 aa2.72□□□□□ -1.97
ECHDC1-217ENST00000488087 PPOXP50336 477 aa2.72□□□□□ -1.97
ECHDC1-217ENST00000488087 DUSP3P51452 185 aaPredicted RBP2.72□□□□□ -1.97
ECHDC1-217ENST00000488087 FKBP1AP62942 108 aaKnown RBP2.72□□□□□ -1.97
ECHDC1-217ENST00000488087 HLA-DRB3P79483 266 aa2.72□□□□□ -1.97
ECHDC1-217ENST00000488087 SLAQ13239 276 aa2.72□□□□□ -1.97
ECHDC1-217ENST00000488087 GGTLC2Q14390 218 aa2.72□□□□□ -1.97
ECHDC1-217ENST00000488087 ARL6IP1Q15041 203 aa2.72□□□□□ -1.97
ECHDC1-217ENST00000488087 ELOCQ15369 112 aa2.72□□□□□ -1.97
ECHDC1-217ENST00000488087 OR7A5Q15622 319 aa2.72□□□□□ -1.97
ECHDC1-217ENST00000488087 TP53I3Q53FA7 332 aa2.72□□□□□ -1.97
ECHDC1-217ENST00000488087 TRMT12Q53H54 448 aaKnown RBP2.72□□□□□ -1.97
ECHDC1-217ENST00000488087 LRRC10Q5BKY1 277 aa2.72□□□□□ -1.97
ECHDC1-217ENST00000488087 ACTL10Q5JWF8 245 aa2.72□□□□□ -1.97
ECHDC1-217ENST00000488087 GPR157Q5UAW9 335 aa2.72□□□□□ -1.97
ECHDC1-217ENST00000488087 SDHAF4Q5VUM1 108 aa2.72□□□□□ -1.97
ECHDC1-217ENST00000488087 AADACL3Q5VUY0 350 aa2.72□□□□□ -1.97
ECHDC1-217ENST00000488087 RAET1LQ5VY80 246 aa2.72□□□□□ -1.97
ECHDC1-217ENST00000488087 ARL9Q6T311 187 aa2.72□□□□□ -1.97
ECHDC1-217ENST00000488087 CXCL17Q6UXB2 119 aa2.72□□□□□ -1.97
ECHDC1-217ENST00000488087 ZNF705AQ6ZN79 300 aaPredicted RBP2.72□□□□□ -1.97
ECHDC1-217ENST00000488087 MBOAT2Q6ZWT7 520 aa2.72□□□□□ -1.97
ECHDC1-217ENST00000488087 DEFB128Q7Z7B8 93 aa2.72□□□□□ -1.97
ECHDC1-217ENST00000488087 CLECL1Q8IZS7 167 aa2.72□□□□□ -1.97
ECHDC1-217ENST00000488087 CCDC71LQ8N9Z2 235 aa2.72□□□□□ -1.97
ECHDC1-217ENST00000488087 GPR32P1Q8NGA4 272 aa2.72□□□□□ -1.97
ECHDC1-217ENST00000488087 OR4C5Q8NGB2 326 aa2.72□□□□□ -1.97
ECHDC1-217ENST00000488087 OR5L1Q8NGL2 311 aa2.72□□□□□ -1.97
ECHDC1-217ENST00000488087 OR2T27Q8NH04 317 aa2.72□□□□□ -1.97
ECHDC1-217ENST00000488087 SYNPRQ8TBG9 265 aa2.72□□□□□ -1.97
ECHDC1-217ENST00000488087 MARCH1Q8TCQ1 289 aa2.72□□□□□ -1.97
ECHDC1-217ENST00000488087 CACNG8Q8WXS5 425 aa2.72□□□□□ -1.97
ECHDC1-217ENST00000488087 MAL2Q969L2 176 aa2.72□□□□□ -1.97
ECHDC1-217ENST00000488087 RBMXL1Q96E39 390 aaKnown RBP2.72□□□□□ -1.97
ECHDC1-217ENST00000488087 NEURL3Q96EH8 262 aa2.72□□□□□ -1.97
ECHDC1-217ENST00000488087 C2orf50Q96LR7 162 aa2.72□□□□□ -1.97
ECHDC1-217ENST00000488087 TSSK3Q96PN8 268 aa2.72□□□□□ -1.97
ECHDC1-217ENST00000488087 P2RX4Q99571 388 aa2.72□□□□□ -1.97
ECHDC1-217ENST00000488087 GABRG3Q99928 467 aa2.72□□□□□ -1.97
ECHDC1-217ENST00000488087 AGMATQ9BSE5 352 aa2.72□□□□□ -1.97
ECHDC1-217ENST00000488087 SRXN1Q9BYN0 137 aa2.72□□□□□ -1.97
ECHDC1-217ENST00000488087 CHST6Q9GZX3 395 aa2.72□□□□□ -1.97
ECHDC1-217ENST00000488087 OR51I1Q9H343 314 aa2.72□□□□□ -1.97
ECHDC1-217ENST00000488087 TCEAL2Q9H3H9 227 aaPredicted RBP2.72□□□□□ -1.97
ECHDC1-217ENST00000488087 GLIPR2Q9H4G4 154 aa2.72□□□□□ -1.97
ECHDC1-217ENST00000488087 PXMP2Q9NR77 195 aa2.72□□□□□ -1.97
ECHDC1-217ENST00000488087 CMC2Q9NRP2 79 aa2.72□□□□□ -1.97
ECHDC1-217ENST00000488087 BET1LQ9NYM9 111 aa2.72□□□□□ -1.97
ECHDC1-217ENST00000488087 IL36GQ9NZH8 169 aa2.72□□□□□ -1.97
ECHDC1-217ENST00000488087 NAT8Q9UHE5 227 aa2.72□□□□□ -1.97
ECHDC1-217ENST00000488087 TBX21Q9UL17 535 aa2.72□□□□□ -1.97
ECHDC1-217ENST00000488087 NOP16Q9Y3C1 178 aaKnown RBP2.72□□□□□ -1.97
ECHDC1-217ENST00000488087 AK6Q9Y3D8 172 aaKnown RBP2.72□□□□□ -1.97
ECHDC1-217ENST00000488087 RBM7Q9Y580 266 aaKnown RBP2.72□□□□□ -1.97
ECHDC1-217ENST00000488087 TRIP11Q15643 1979 aa2.72□□□□□ -1.97
ECHDC1-217ENST00000488087 TDRD6O60522 2096 aaKnown RBP2.72□□□□□ -1.97
ECHDC1-217ENST00000488087 MYLKQ15746 1914 aa2.72□□□□□ -1.97
ECHDC1-217ENST00000488087 THSD7BQ9C0I4 1608 aa2.71□□□□□ -1.97
ECHDC1-217ENST00000488087 NYNRINQ9P2P1 1898 aaKnown RBP2.71□□□□□ -1.98
ECHDC1-217ENST00000488087 BORCS7-ASMTA0A0B4J1R7 106 aa2.71□□□□□ -1.98
ECHDC1-217ENST00000488087 A0A0G2JN53 185 aa2.71□□□□□ -1.98
ECHDC1-217ENST00000488087 PRSS37A4D1T9 235 aa2.71□□□□□ -1.98
ECHDC1-217ENST00000488087 NKX2-6A6NCS4 301 aa2.71□□□□□ -1.98
ECHDC1-217ENST00000488087 RBFOX3A6NFN3 312 aa2.71□□□□□ -1.98
ECHDC1-217ENST00000488087 ZNF860A6NHJ4 632 aa2.71□□□□□ -1.98
ECHDC1-217ENST00000488087 VSTM2BA6NLU5 285 aa2.71□□□□□ -1.98
ECHDC1-217ENST00000488087 HIDE1A8MVS5 230 aa2.71□□□□□ -1.98
ECHDC1-217ENST00000488087 H0Y9J4 135 aa2.71□□□□□ -1.98
ECHDC1-217ENST00000488087 K7N7A8 449 aa2.71□□□□□ -1.98
ECHDC1-217ENST00000488087 XKRYO14609 159 aa2.71□□□□□ -1.98
ECHDC1-217ENST00000488087 PIN1P1O15428 100 aa2.71□□□□□ -1.98
ECHDC1-217ENST00000488087 RBFOX2O43251 390 aaKnown RBP eCLIP2.71□□□□□ -1.98
ECHDC1-217ENST00000488087 CXCL13O43927 109 aa2.71□□□□□ -1.98
ECHDC1-217ENST00000488087 VAMP5O95183 116 aa2.71□□□□□ -1.98
ECHDC1-217ENST00000488087 TSPAN13O95857 204 aa2.71□□□□□ -1.98
ECHDC1-217ENST00000488087 HBE1P02100 147 aa2.71□□□□□ -1.98
ECHDC1-217ENST00000488087 OPN1SWP03999 348 aa2.71□□□□□ -1.98
ECHDC1-217ENST00000488087 CD3DP04234 171 aa2.71□□□□□ -1.98
ECHDC1-217ENST00000488087 TACSTD2P09758 323 aa2.71□□□□□ -1.98
ECHDC1-217ENST00000488087 OR4Q2P0C623 313 aa2.71□□□□□ -1.98
ECHDC1-217ENST00000488087 PTHLHP12272 177 aa2.71□□□□□ -1.98
ECHDC1-217ENST00000488087 CTSEP14091 401 aa2.71□□□□□ -1.98
ECHDC1-217ENST00000488087 ZNF43P17038 809 aa2.71□□□□□ -1.98
ECHDC1-217ENST00000488087 ZNF7P17097 686 aaPredicted RBP2.71□□□□□ -1.98
ECHDC1-217ENST00000488087 TCN2P20062 427 aa2.71□□□□□ -1.98
ECHDC1-217ENST00000488087 GZMHP20718 246 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms