RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 RTL8CO15255 209 aa5.62□□□□□ -1.51
PDPN-205ENST00000487038 CRYZL1O95825 349 aa5.62□□□□□ -1.51
PDPN-205ENST00000487038 IGHV3-23P01764 117 aa5.62□□□□□ -1.51
PDPN-205ENST00000487038 C8orf88P0DMB2 117 aa5.62□□□□□ -1.51
PDPN-205ENST00000487038 HIST1H1BP16401 226 aaKnown RBP5.62□□□□□ -1.51
PDPN-205ENST00000487038 CMC4P56277 68 aaPredicted RBP5.62□□□□□ -1.51
PDPN-205ENST00000487038 RPS27AP62979 156 aaKnown RBP5.62□□□□□ -1.51
PDPN-205ENST00000487038 GNGT1P63211 74 aa5.62□□□□□ -1.51
PDPN-205ENST00000487038 TTC23Q5W5X9 447 aa5.62□□□□□ -1.51
PDPN-205ENST00000487038 IDO2Q6ZQW0 420 aa5.62□□□□□ -1.51
PDPN-205ENST00000487038 AMIGO2Q86SJ2 522 aa5.62□□□□□ -1.51
PDPN-205ENST00000487038 OR5B3Q8NH48 314 aa5.62□□□□□ -1.51
PDPN-205ENST00000487038 OR4A5Q8NH83 315 aa5.62□□□□□ -1.51
PDPN-205ENST00000487038 ADTRPQ96IZ2 230 aa5.62□□□□□ -1.51
PDPN-205ENST00000487038 CXorf58Q96LI9 332 aa5.62□□□□□ -1.51
PDPN-205ENST00000487038 SLC29A1Q99808 456 aa5.62□□□□□ -1.51
PDPN-205ENST00000487038 ZNF430Q9H8G1 570 aaPredicted RBP5.62□□□□□ -1.51
PDPN-205ENST00000487038 C12orf4Q9NQ89 552 aa5.62□□□□□ -1.51
PDPN-205ENST00000487038 SDHAF2Q9NX18 166 aa5.62□□□□□ -1.51
PDPN-205ENST00000487038 RBM7Q9Y580 266 aaKnown RBP5.62□□□□□ -1.51
PDPN-205ENST00000487038 AP4S1Q9Y587 144 aa5.62□□□□□ -1.51
PDPN-205ENST00000487038 IRGMA1A4Y4 181 aa5.61□□□□□ -1.51
PDPN-205ENST00000487038 SRRM4A7MD48 611 aaKnown RBP5.61□□□□□ -1.51
PDPN-205ENST00000487038 CDK2AP2O75956 126 aa5.61□□□□□ -1.51
PDPN-205ENST00000487038 LIMS3P0CW19 117 aa5.61□□□□□ -1.51
PDPN-205ENST00000487038 LIMS4P0CW20 117 aa5.61□□□□□ -1.51
PDPN-205ENST00000487038 SAA1P0DJI8 122 aaPredicted RBP5.61□□□□□ -1.51
PDPN-205ENST00000487038 DEFA4P12838 97 aa5.61□□□□□ -1.51
PDPN-205ENST00000487038 MYL12AP19105 171 aa5.61□□□□□ -1.51
PDPN-205ENST00000487038 SRMP19623 302 aa5.61□□□□□ -1.51
PDPN-205ENST00000487038 MAPK3P27361 379 aaPredicted RBP5.61□□□□□ -1.51
PDPN-205ENST00000487038 MRPS15P82914 257 aaKnown RBP5.61□□□□□ -1.51
PDPN-205ENST00000487038 TMEM187Q14656 261 aa5.61□□□□□ -1.51
PDPN-205ENST00000487038 MRGPRG-AS1Q2M3A8 158 aa5.61□□□□□ -1.51
PDPN-205ENST00000487038 LGALS9BQ3B8N2 356 aa5.61□□□□□ -1.51
PDPN-205ENST00000487038 CEACAM19Q7Z692 300 aa5.61□□□□□ -1.51
PDPN-205ENST00000487038 ZNF575Q86XF7 245 aa5.61□□□□□ -1.51
PDPN-205ENST00000487038 POM121L12Q8N7R1 296 aa5.61□□□□□ -1.51
PDPN-205ENST00000487038 VSTM2AQ8TAG5 236 aa5.61□□□□□ -1.51
PDPN-205ENST00000487038 GGHQ92820 318 aa5.61□□□□□ -1.51
PDPN-205ENST00000487038 CENPNQ96H22 339 aaPredicted RBP5.61□□□□□ -1.51
PDPN-205ENST00000487038 CYYR1Q96J86 154 aa5.61□□□□□ -1.51
PDPN-205ENST00000487038 FYTTD1Q96QD9 318 aaKnown RBP5.61□□□□□ -1.51
PDPN-205ENST00000487038 RNF126Q9BV68 326 aa5.61□□□□□ -1.51
PDPN-205ENST00000487038 TM2D1Q9BX74 207 aa5.61□□□□□ -1.51
PDPN-205ENST00000487038 AMBNQ9NP70 447 aa5.61□□□□□ -1.51
PDPN-205ENST00000487038 DAZ1Q9NQZ3 744 aaKnown RBP5.61□□□□□ -1.51
PDPN-205ENST00000487038 ZNF446Q9NWS9 450 aa5.61□□□□□ -1.51
PDPN-205ENST00000487038 TRBV5-7A0A0A0MS05 114 aa5.6□□□□□ -1.51
PDPN-205ENST00000487038 A0A1W2PPK0 400 aa5.6□□□□□ -1.51
PDPN-205ENST00000487038 SAC3D1A6NKF1 404 aa5.6□□□□□ -1.51
PDPN-205ENST00000487038 M0R2N4 97 aa5.6□□□□□ -1.51
PDPN-205ENST00000487038 DEFB4AO15263 64 aa5.6□□□□□ -1.51
PDPN-205ENST00000487038 OGG1O15527 345 aa5.6□□□□□ -1.51
PDPN-205ENST00000487038 MRPS14O60783 128 aaKnown RBP5.6□□□□□ -1.51
PDPN-205ENST00000487038 CA1P00915 261 aaPredicted RBP5.6□□□□□ -1.51
PDPN-205ENST00000487038 AMBPP02760 352 aa5.6□□□□□ -1.51
PDPN-205ENST00000487038 ALPLP05186 524 aa5.6□□□□□ -1.51
PDPN-205ENST00000487038 GABRB1P18505 474 aa5.6□□□□□ -1.51
PDPN-205ENST00000487038 DCKP27707 260 aa5.6□□□□□ -1.51
PDPN-205ENST00000487038 PSMB6P28072 239 aa5.6□□□□□ -1.51
PDPN-205ENST00000487038 GPR183P32249 361 aa5.6□□□□□ -1.51
PDPN-205ENST00000487038 RPL27AP46776 148 aaKnown RBP5.6□□□□□ -1.51
PDPN-205ENST00000487038 TAS2R43P59537 309 aa5.6□□□□□ -1.51
PDPN-205ENST00000487038 OR2G6Q5TZ20 316 aa5.6□□□□□ -1.51
PDPN-205ENST00000487038 PLET1Q6UQ28 207 aa5.6□□□□□ -1.51
PDPN-205ENST00000487038 UNQ9165/PRO28630Q6UXU0 137 aa5.6□□□□□ -1.51
PDPN-205ENST00000487038 CCDC197Q8NCU1 140 aa5.6□□□□□ -1.51
PDPN-205ENST00000487038 OR4A4PQ8NGN8 299 aa5.6□□□□□ -1.51
PDPN-205ENST00000487038 OR10J5Q8NHC4 309 aa5.6□□□□□ -1.51
PDPN-205ENST00000487038 TMEM190Q8WZ59 177 aa5.6□□□□□ -1.51
PDPN-205ENST00000487038 NICN1Q9BSH3 213 aa5.6□□□□□ -1.51
PDPN-205ENST00000487038 DCUN1D5Q9BTE7 237 aa5.6□□□□□ -1.51
PDPN-205ENST00000487038 URM1Q9BTM9 101 aaKnown RBP5.6□□□□□ -1.51
PDPN-205ENST00000487038 Q9N2K0 584 aa5.6□□□□□ -1.51
PDPN-205ENST00000487038 FGF20Q9NP95 211 aaPredicted RBP5.6□□□□□ -1.51
PDPN-205ENST00000487038 MRPS18AQ9NVS2 196 aaKnown RBP5.6□□□□□ -1.51
PDPN-205ENST00000487038 BABAM2Q9NXR7 383 aa5.6□□□□□ -1.51
PDPN-205ENST00000487038 THYN1Q9P016 225 aa5.6□□□□□ -1.51
PDPN-205ENST00000487038 AASSQ9UDR5 926 aa5.6□□□□□ -1.51
PDPN-205ENST00000487038 AK3Q9UIJ7 227 aa5.6□□□□□ -1.51
PDPN-205ENST00000487038 MRPS7Q9Y2R9 242 aaKnown RBP5.6□□□□□ -1.51
PDPN-205ENST00000487038 S4R3C0 116 aa5.6□□□□□ -1.51
PDPN-205ENST00000487038 ERICH4A6NGS2 130 aa5.59□□□□□ -1.51
PDPN-205ENST00000487038 HMX3A6NHT5 357 aa5.59□□□□□ -1.51
PDPN-205ENST00000487038 TRDCB7Z8K6 153 aa5.59□□□□□ -1.51
PDPN-205ENST00000487038 EI24O14681 340 aa5.59□□□□□ -1.51
PDPN-205ENST00000487038 BET1O15155 118 aa5.59□□□□□ -1.51
PDPN-205ENST00000487038 CYB5BO43169 146 aa5.59□□□□□ -1.51
PDPN-205ENST00000487038 KBTBD11O94819 623 aa5.59□□□□□ -1.51
PDPN-205ENST00000487038 S1PR2O95136 353 aa5.59□□□□□ -1.51
PDPN-205ENST00000487038 BPNT1O95861 308 aa5.59□□□□□ -1.51
PDPN-205ENST00000487038 CLEC3BP05452 202 aa5.59□□□□□ -1.51
PDPN-205ENST00000487038 CRYGCP07315 174 aa5.59□□□□□ -1.51
PDPN-205ENST00000487038 HTR2CP28335 458 aa5.59□□□□□ -1.51
PDPN-205ENST00000487038 DUTP33316 252 aaKnown RBP5.59□□□□□ -1.51
PDPN-205ENST00000487038 MAS1LP35410 378 aa5.59□□□□□ -1.51
PDPN-205ENST00000487038 RPS11P62280 158 aaKnown RBP eCLIP5.59□□□□□ -1.51
PDPN-205ENST00000487038 SSX1Q16384 188 aa5.59□□□□□ -1.51
PDPN-205ENST00000487038 ZIK1Q3SY52 487 aaPredicted RBP5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms