RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 C9orf66Q5T8R8 295 aa9.97□□□□□ -0.81
HDAC1-209ENST00000484305 VKORC1L1Q8N0U8 176 aa9.97□□□□□ -0.81
HDAC1-209ENST00000484305 MFSD4AQ8N468 514 aa9.97□□□□□ -0.81
HDAC1-209ENST00000484305 POC5Q8NA72 575 aa9.97□□□□□ -0.81
HDAC1-209ENST00000484305 OR5AP2Q8NGF4 316 aa9.97□□□□□ -0.81
HDAC1-209ENST00000484305 DCUN1D4Q92564 292 aa9.97□□□□□ -0.81
HDAC1-209ENST00000484305 KCTD12Q96CX2 325 aaKnown RBP9.97□□□□□ -0.81
HDAC1-209ENST00000484305 RHOVQ96L33 236 aa9.97□□□□□ -0.81
HDAC1-209ENST00000484305 SLA2Q9H6Q3 261 aa9.97□□□□□ -0.81
HDAC1-209ENST00000484305 ZNF430Q9H8G1 570 aaPredicted RBP9.97□□□□□ -0.81
HDAC1-209ENST00000484305 IFT46Q9NQC8 304 aa9.97□□□□□ -0.81
HDAC1-209ENST00000484305 ZNF355PQ9NSJ1 428 aa9.97□□□□□ -0.81
HDAC1-209ENST00000484305 COMMD3Q9UBI1 195 aa9.97□□□□□ -0.81
HDAC1-209ENST00000484305 SCOCQ9UIL1 159 aa9.97□□□□□ -0.81
HDAC1-209ENST00000484305 MRPS7Q9Y2R9 242 aaKnown RBP9.97□□□□□ -0.81
HDAC1-209ENST00000484305 LINC01619G3V211 115 aa9.96□□□□□ -0.82
HDAC1-209ENST00000484305 TNFSF12O43508 249 aa9.96□□□□□ -0.82
HDAC1-209ENST00000484305 SLURP1P55000 103 aa9.96□□□□□ -0.82
HDAC1-209ENST00000484305 FXYD4P59646 89 aa9.96□□□□□ -0.82
HDAC1-209ENST00000484305 DGCR2P98153 550 aa9.96□□□□□ -0.82
HDAC1-209ENST00000484305 CDK10Q15131 360 aa9.96□□□□□ -0.82
HDAC1-209ENST00000484305 DEFB121Q5J5C9 76 aa9.96□□□□□ -0.82
HDAC1-209ENST00000484305 ZNF66Q6ZN08 573 aa9.96□□□□□ -0.82
HDAC1-209ENST00000484305 ANKRD13BQ86YJ7 626 aa9.96□□□□□ -0.82
HDAC1-209ENST00000484305 GIMAP1Q8WWP7 306 aa9.96□□□□□ -0.82
HDAC1-209ENST00000484305 ACOT12Q8WYK0 555 aa9.96□□□□□ -0.82
HDAC1-209ENST00000484305 DLX4Q92988 240 aaPredicted RBP9.96□□□□□ -0.82
HDAC1-209ENST00000484305 TMEM68Q96MH6 324 aa9.96□□□□□ -0.82
HDAC1-209ENST00000484305 ANAPC10Q9UM13 185 aa9.96□□□□□ -0.82
HDAC1-209ENST00000484305 H3BUA1 57 aa9.95□□□□□ -0.82
HDAC1-209ENST00000484305 NAT1P18440 290 aa9.95□□□□□ -0.82
HDAC1-209ENST00000484305 PRSS3P35030 304 aa9.95□□□□□ -0.82
HDAC1-209ENST00000484305 RFX2P48378 723 aa9.95□□□□□ -0.82
HDAC1-209ENST00000484305 DEFA5Q01523 94 aa9.95□□□□□ -0.82
HDAC1-209ENST00000484305 MSMO1Q15800 293 aa9.95□□□□□ -0.82
HDAC1-209ENST00000484305 CTF1Q16619 201 aa9.95□□□□□ -0.82
HDAC1-209ENST00000484305 OR4S2Q8NH73 311 aa9.95□□□□□ -0.82
HDAC1-209ENST00000484305 SRSF12Q8WXF0 261 aaKnown RBP9.95□□□□□ -0.82
HDAC1-209ENST00000484305 PHB2Q99623 299 aa9.95□□□□□ -0.82
HDAC1-209ENST00000484305 SLC5A7Q9GZV3 580 aa9.95□□□□□ -0.82
HDAC1-209ENST00000484305 EHFQ9NZC4 300 aa9.95□□□□□ -0.82
HDAC1-209ENST00000484305 C13orf42A0A1B0GVH6 325 aa9.94□□□□□ -0.82
HDAC1-209ENST00000484305 OVOL1O14753 267 aa9.94□□□□□ -0.82
HDAC1-209ENST00000484305 HPGDSO60760 199 aa9.94□□□□□ -0.82
HDAC1-209ENST00000484305 RAMP3O60896 148 aa9.94□□□□□ -0.82
HDAC1-209ENST00000484305 RBMXL2O75526 392 aaKnown RBP9.94□□□□□ -0.82
HDAC1-209ENST00000484305 GABARAPO95166 117 aa9.94□□□□□ -0.82
HDAC1-209ENST00000484305 APOA1P02647 267 aa9.94□□□□□ -0.82
HDAC1-209ENST00000484305 PMP2P02689 132 aa9.94□□□□□ -0.82
HDAC1-209ENST00000484305 HSPB1P04792 205 aaKnown RBP9.94□□□□□ -0.82
HDAC1-209ENST00000484305 ELK1P19419 428 aa9.94□□□□□ -0.82
HDAC1-209ENST00000484305 RORCP51449 518 aa9.94□□□□□ -0.82
HDAC1-209ENST00000484305 C10orf55Q5SWW7 151 aa9.94□□□□□ -0.82
HDAC1-209ENST00000484305 GPR107Q5VW38 600 aa9.94□□□□□ -0.82
HDAC1-209ENST00000484305 DHRS11Q6UWP2 260 aa9.94□□□□□ -0.82
HDAC1-209ENST00000484305 ZNF818PQ6ZRF7 136 aa9.94□□□□□ -0.82
HDAC1-209ENST00000484305 TMEM17Q86X19 198 aa9.94□□□□□ -0.82
HDAC1-209ENST00000484305 LYSMD2Q8IV50 215 aa9.94□□□□□ -0.82
HDAC1-209ENST00000484305 MMD2Q8IY49 270 aa9.94□□□□□ -0.82
HDAC1-209ENST00000484305 PUSL1Q8N0Z8 303 aaKnown RBP9.94□□□□□ -0.82
HDAC1-209ENST00000484305 ZBTB34Q8NCN2 500 aa9.94□□□□□ -0.82
HDAC1-209ENST00000484305 ADAD2Q8NCV1 583 aaKnown RBP9.94□□□□□ -0.82
HDAC1-209ENST00000484305 CMTM3Q96MX0 182 aa9.94□□□□□ -0.82
HDAC1-209ENST00000484305 MRPS26Q9BYN8 205 aaKnown RBP9.94□□□□□ -0.82
HDAC1-209ENST00000484305 TINAGL1Q9GZM7 467 aaPredicted RBP9.94□□□□□ -0.82
HDAC1-209ENST00000484305 COA4Q9NYJ1 87 aa9.94□□□□□ -0.82
HDAC1-209ENST00000484305 ZMAT5Q9UDW3 170 aaKnown RBP9.94□□□□□ -0.82
HDAC1-209ENST00000484305 SORL1Q92673 2214 aa9.93□□□□□ -0.82
HDAC1-209ENST00000484305 SMIM31A0A1B0GVY4 71 aa9.93□□□□□ -0.82
HDAC1-209ENST00000484305 SULT1C2O00338 296 aa9.93□□□□□ -0.82
HDAC1-209ENST00000484305 CREBL2O60519 120 aaPredicted RBP9.93□□□□□ -0.82
HDAC1-209ENST00000484305 ACTL6BO94805 426 aa9.93□□□□□ -0.82
HDAC1-209ENST00000484305 KBTBD11O94819 623 aa9.93□□□□□ -0.82
HDAC1-209ENST00000484305 OR2A4O95047 310 aa9.93□□□□□ -0.82
HDAC1-209ENST00000484305 BRI3O95415 125 aa9.93□□□□□ -0.82
HDAC1-209ENST00000484305 GNRHRP30968 328 aa9.93□□□□□ -0.82
HDAC1-209ENST00000484305 ECI1P42126 302 aa9.93□□□□□ -0.82
HDAC1-209ENST00000484305 DYRK1AQ13627 763 aa9.93□□□□□ -0.82
HDAC1-209ENST00000484305 DMRTA1Q5VZB9 504 aa9.93□□□□□ -0.82
HDAC1-209ENST00000484305 SSX9Q7RTT3 188 aa9.93□□□□□ -0.82
HDAC1-209ENST00000484305 SNX29P2Q8IUI4 249 aa9.93□□□□□ -0.82
HDAC1-209ENST00000484305 GPX8Q8TED1 209 aa9.93□□□□□ -0.82
HDAC1-209ENST00000484305 OR2A7Q96R45 310 aa9.93□□□□□ -0.82
HDAC1-209ENST00000484305 PRR25Q96S07 402 aa9.93□□□□□ -0.82
HDAC1-209ENST00000484305 ZNF2Q9BSG1 426 aaPredicted RBP9.93□□□□□ -0.82
HDAC1-209ENST00000484305 A0A0G2JLM5 398 aa9.92□□□□□ -0.82
HDAC1-209ENST00000484305 ANKRD34BA5PLL1 514 aa9.92□□□□□ -0.82
HDAC1-209ENST00000484305 E7EUB6 86 aa9.92□□□□□ -0.82
HDAC1-209ENST00000484305 MPPED1O15442 326 aa9.92□□□□□ -0.82
HDAC1-209ENST00000484305 PRH1P02810 166 aa9.92□□□□□ -0.82
HDAC1-209ENST00000484305 OR9G9P0C7N8 305 aa9.92□□□□□ -0.82
HDAC1-209ENST00000484305 HLA-DMAP28067 261 aa9.92□□□□□ -0.82
HDAC1-209ENST00000484305 KIR2DS2P43631 304 aa9.92□□□□□ -0.82
HDAC1-209ENST00000484305 ALDH3B2P48448 385 aa9.92□□□□□ -0.82
HDAC1-209ENST00000484305 INSL3P51460 131 aa9.92□□□□□ -0.82
HDAC1-209ENST00000484305 TAS2R46P59540 309 aa9.92□□□□□ -0.82
HDAC1-209ENST00000484305 HERV-K104P61576 105 aa9.92□□□□□ -0.82
HDAC1-209ENST00000484305 SPAG16Q8N0X2 631 aa9.92□□□□□ -0.82
HDAC1-209ENST00000484305 OR5H2Q8NGV7 314 aa9.92□□□□□ -0.82
HDAC1-209ENST00000484305 VSTM2AQ8TAG5 236 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms