RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 CDK10Q15131 360 aa11.95□□□□□ -0.5
DDX56-210ENST00000479440 MED22Q15528 200 aa11.95□□□□□ -0.5
DDX56-210ENST00000479440 RBM48Q5RL73 367 aaKnown RBP11.95□□□□□ -0.5
DDX56-210ENST00000479440 CEACAM19Q7Z692 300 aa11.95□□□□□ -0.5
DDX56-210ENST00000479440 OR2C3Q8N628 320 aa11.95□□□□□ -0.5
DDX56-210ENST00000479440 EEF1AKMT3Q96AZ1 226 aa11.95□□□□□ -0.5
DDX56-210ENST00000479440 CCDC140Q96MF4 163 aa11.95□□□□□ -0.5
DDX56-210ENST00000479440 LPAR5Q9H1C0 372 aa11.95□□□□□ -0.5
DDX56-210ENST00000479440 ZNF430Q9H8G1 570 aaPredicted RBP11.95□□□□□ -0.5
DDX56-210ENST00000479440 RBM7Q9Y580 266 aaKnown RBP11.95□□□□□ -0.5
DDX56-210ENST00000479440 RYR1P21817 5038 aa11.95□□□□□ -0.5
DDX56-210ENST00000479440 DPPA5A6NC42 116 aa11.94□□□□□ -0.5
DDX56-210ENST00000479440 MYL12BO14950 172 aa11.94□□□□□ -0.5
DDX56-210ENST00000479440 SAA1P0DJI8 122 aaPredicted RBP11.94□□□□□ -0.5
DDX56-210ENST00000479440 TCTAP57738 103 aa11.94□□□□□ -0.5
DDX56-210ENST00000479440 QRFPP83859 136 aa11.94□□□□□ -0.5
DDX56-210ENST00000479440 CLEC19AQ6UXS0 136 aa11.94□□□□□ -0.5
DDX56-210ENST00000479440 OR6M1Q8NGM8 313 aa11.94□□□□□ -0.5
DDX56-210ENST00000479440 OR10J5Q8NHC4 309 aa11.94□□□□□ -0.5
DDX56-210ENST00000479440 PHYHIPQ92561 330 aa11.94□□□□□ -0.5
DDX56-210ENST00000479440 SPAG8Q99932 426 aaPredicted RBP11.94□□□□□ -0.5
DDX56-210ENST00000479440 CABLES2Q9BTV7 478 aa11.94□□□□□ -0.5
DDX56-210ENST00000479440 EFCAB10A6NFE3 127 aa11.93□□□□□ -0.5
DDX56-210ENST00000479440 NPIPB5A8MRT5 1133 aa11.93□□□□□ -0.5
DDX56-210ENST00000479440 BET1O15155 118 aa11.93□□□□□ -0.5
DDX56-210ENST00000479440 FABP7O15540 132 aa11.93□□□□□ -0.5
DDX56-210ENST00000479440 DHFRP00374 187 aa11.93□□□□□ -0.5
DDX56-210ENST00000479440 IGHV3-23P01764 117 aa11.93□□□□□ -0.5
DDX56-210ENST00000479440 IFNA4P05014 189 aa11.93□□□□□ -0.5
DDX56-210ENST00000479440 MRPS15P82914 257 aaKnown RBP11.93□□□□□ -0.5
DDX56-210ENST00000479440 C10orf55Q5SWW7 151 aa11.93□□□□□ -0.5
DDX56-210ENST00000479440 C5orf30Q96GV9 206 aa11.93□□□□□ -0.5
DDX56-210ENST00000479440 DIRAS3O95661 229 aa11.92□□□□□ -0.5
DDX56-210ENST00000479440 DUTP33316 252 aaKnown RBP11.92□□□□□ -0.5
DDX56-210ENST00000479440 WNT4P56705 351 aa11.92□□□□□ -0.5
DDX56-210ENST00000479440 PRR20EP86478 221 aa11.92□□□□□ -0.5
DDX56-210ENST00000479440 PRR20CP86479 221 aa11.92□□□□□ -0.5
DDX56-210ENST00000479440 PRR20DP86480 221 aa11.92□□□□□ -0.5
DDX56-210ENST00000479440 PRR20BP86481 221 aa11.92□□□□□ -0.5
DDX56-210ENST00000479440 PRR20AP86496 221 aa11.92□□□□□ -0.5
DDX56-210ENST00000479440 RBMS2Q15434 407 aaKnown RBP11.92□□□□□ -0.5
DDX56-210ENST00000479440 LINC00336Q6ZUF6 198 aa11.92□□□□□ -0.5
DDX56-210ENST00000479440 LRRTM1Q86UE6 522 aa11.92□□□□□ -0.5
DDX56-210ENST00000479440 FAM89BQ8N5H3 189 aa11.92□□□□□ -0.5
DDX56-210ENST00000479440 MRPL27Q9P0M9 148 aaKnown RBP11.92□□□□□ -0.5
DDX56-210ENST00000479440 UBQLN2Q9UHD9 624 aa11.92□□□□□ -0.5
DDX56-210ENST00000479440 UFC1Q9Y3C8 167 aa11.92□□□□□ -0.5
DDX56-210ENST00000479440 VPS13DQ5THJ4 4388 aa11.91□□□□□ -0.5
DDX56-210ENST00000479440 HMX3A6NHT5 357 aa11.91□□□□□ -0.5
DDX56-210ENST00000479440 FOXI3A8MTJ6 420 aaPredicted RBP11.91□□□□□ -0.5
DDX56-210ENST00000479440 CD3GP09693 182 aa11.91□□□□□ -0.5
DDX56-210ENST00000479440 MED14OSP0DP75 135 aa11.91□□□□□ -0.5
DDX56-210ENST00000479440 MYOD1P15172 320 aa11.91□□□□□ -0.5
DDX56-210ENST00000479440 GALP22466 123 aa11.91□□□□□ -0.5
DDX56-210ENST00000479440 ACSM3Q53FZ2 586 aa11.91□□□□□ -0.5
DDX56-210ENST00000479440 C2CD4CQ8TF44 421 aa11.91□□□□□ -0.5
DDX56-210ENST00000479440 ARHGAP5-AS1Q96IT6 56 aa11.91□□□□□ -0.5
DDX56-210ENST00000479440 DCUN1D5Q9BTE7 237 aa11.91□□□□□ -0.5
DDX56-210ENST00000479440 PECRQ9BY49 303 aa11.91□□□□□ -0.5
DDX56-210ENST00000479440 FBXL17Q9UF56 701 aa11.91□□□□□ -0.5
DDX56-210ENST00000479440 DNAH6Q9C0G6 4158 aa11.9□□□□□ -0.5
DDX56-210ENST00000479440 TRBV6-7A0A0A0MS04 114 aa11.9□□□□□ -0.5
DDX56-210ENST00000479440 TRBV7-1A0A0A6YYK4 115 aa11.9□□□□□ -0.5
DDX56-210ENST00000479440 TEX22C9J3V5 150 aa11.9□□□□□ -0.5
DDX56-210ENST00000479440 C8orf88P0DMB2 117 aa11.9□□□□□ -0.5
DDX56-210ENST00000479440 HIST1H1BP16401 226 aaKnown RBP11.9□□□□□ -0.5
DDX56-210ENST00000479440 CTRB1P17538 263 aa11.9□□□□□ -0.5
DDX56-210ENST00000479440 RPL27AP46776 148 aaKnown RBP11.9□□□□□ -0.5
DDX56-210ENST00000479440 ELLP55199 621 aaPredicted RBP11.9□□□□□ -0.5
DDX56-210ENST00000479440 ST3GAL4Q11206 333 aa11.9□□□□□ -0.5
DDX56-210ENST00000479440 INSL4Q14641 139 aa11.9□□□□□ -0.5
DDX56-210ENST00000479440 ZNF585BQ52M93 769 aa11.9□□□□□ -0.5
DDX56-210ENST00000479440 IGSF11Q5DX21 431 aa11.9□□□□□ -0.5
DDX56-210ENST00000479440 CTRB2Q6GPI1 263 aa11.9□□□□□ -0.5
DDX56-210ENST00000479440 C19orf35Q6ZS72 473 aa11.9□□□□□ -0.5
DDX56-210ENST00000479440 MS4A15Q8N5U1 240 aa11.9□□□□□ -0.5
DDX56-210ENST00000479440 OR56B1Q8NGI3 324 aa11.9□□□□□ -0.5
DDX56-210ENST00000479440 VSTM2AQ8TAG5 236 aa11.9□□□□□ -0.5
DDX56-210ENST00000479440 C11orf45Q8TAV5 145 aa11.9□□□□□ -0.5
DDX56-210ENST00000479440 GALNT14Q96FL9 552 aa11.9□□□□□ -0.5
DDX56-210ENST00000479440 FYTTD1Q96QD9 318 aaKnown RBP11.9□□□□□ -0.5
DDX56-210ENST00000479440 GINS4Q9BRT9 223 aa11.9□□□□□ -0.5
DDX56-210ENST00000479440 C6orf62Q9GZU0 229 aaPredicted RBP11.9□□□□□ -0.5
DDX56-210ENST00000479440 C11orf68Q9H3H3 251 aaKnown RBP11.9□□□□□ -0.5
DDX56-210ENST00000479440 C5orf66Q9H5L9 145 aa11.9□□□□□ -0.5
DDX56-210ENST00000479440 SMPD3Q9NY59 655 aaPredicted RBP11.9□□□□□ -0.5
DDX56-210ENST00000479440 MRPS7Q9Y2R9 242 aaKnown RBP11.9□□□□□ -0.5
DDX56-210ENST00000479440 S4R3C0 116 aa11.9□□□□□ -0.5
DDX56-210ENST00000479440 LINC00473A8K010 186 aa11.89□□□□□ -0.51
DDX56-210ENST00000479440 TSPAN4O14817 238 aa11.89□□□□□ -0.51
DDX56-210ENST00000479440 FCGR3AP08637 254 aa11.89□□□□□ -0.51
DDX56-210ENST00000479440 RPL35AP18077 110 aaKnown RBP11.89□□□□□ -0.51
DDX56-210ENST00000479440 HSD17B12Q53GQ0 312 aa11.89□□□□□ -0.51
DDX56-210ENST00000479440 UNQ9165/PRO28630Q6UXU0 137 aa11.89□□□□□ -0.51
DDX56-210ENST00000479440 SETD9Q8NE22 299 aa11.89□□□□□ -0.51
DDX56-210ENST00000479440 CXorf58Q96LI9 332 aa11.89□□□□□ -0.51
DDX56-210ENST00000479440 FANCD2OSQ96PS1 177 aa11.89□□□□□ -0.51
DDX56-210ENST00000479440 PLGRKTQ9HBL7 147 aa11.89□□□□□ -0.51
DDX56-210ENST00000479440 SLC2A9Q9NRM0 540 aa11.89□□□□□ -0.51
DDX56-210ENST00000479440 ERICH4A6NGS2 130 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms