RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 LCNL1Q6ZST4 164 aa7.62□□□□□ -1.19
HDAC3-208ENST00000476739 FOXRED2Q8IWF2 684 aa7.62□□□□□ -1.19
HDAC3-208ENST00000476739 LINC00518Q8N0U6 118 aa7.62□□□□□ -1.19
HDAC3-208ENST00000476739 OR5H2Q8NGV7 314 aa7.62□□□□□ -1.19
HDAC3-208ENST00000476739 FLYWCH2Q96CP2 140 aaKnown RBP7.62□□□□□ -1.19
HDAC3-208ENST00000476739 CLCC1Q96S66 551 aa7.62□□□□□ -1.19
HDAC3-208ENST00000476739 RNF5Q99942 180 aa7.62□□□□□ -1.19
HDAC3-208ENST00000476739 ZNF2Q9BSG1 426 aaPredicted RBP7.62□□□□□ -1.19
HDAC3-208ENST00000476739 SLC5A7Q9GZV3 580 aa7.62□□□□□ -1.19
HDAC3-208ENST00000476739 TAS2R8Q9NYW2 309 aa7.62□□□□□ -1.19
HDAC3-208ENST00000476739 KIAA1456Q9P272 454 aa7.62□□□□□ -1.19
HDAC3-208ENST00000476739 LINC00854A0A1B0GVQ3 168 aa7.61□□□□□ -1.19
HDAC3-208ENST00000476739 M0QYG6 137 aa7.61□□□□□ -1.19
HDAC3-208ENST00000476739 M0QZ24 198 aa7.61□□□□□ -1.19
HDAC3-208ENST00000476739 AP4M1O00189 453 aa7.61□□□□□ -1.19
HDAC3-208ENST00000476739 SULT1C2O00338 296 aa7.61□□□□□ -1.19
HDAC3-208ENST00000476739 ATP6V0E1O15342 81 aa7.61□□□□□ -1.19
HDAC3-208ENST00000476739 KCNAB3O43448 404 aa7.61□□□□□ -1.19
HDAC3-208ENST00000476739 SLC25A17O43808 307 aa7.61□□□□□ -1.19
HDAC3-208ENST00000476739 FCGR3BO75015 233 aa7.61□□□□□ -1.19
HDAC3-208ENST00000476739 CRYGBP07316 175 aa7.61□□□□□ -1.19
HDAC3-208ENST00000476739 EGR2P11161 476 aaPredicted RBP7.61□□□□□ -1.19
HDAC3-208ENST00000476739 GNRHRP30968 328 aa7.61□□□□□ -1.19
HDAC3-208ENST00000476739 TAS2R46P59540 309 aa7.61□□□□□ -1.19
HDAC3-208ENST00000476739 SSTP61278 116 aa7.61□□□□□ -1.19
HDAC3-208ENST00000476739 CX3CL1P78423 397 aa7.61□□□□□ -1.19
HDAC3-208ENST00000476739 SSBP2P81877 361 aaPredicted RBP7.61□□□□□ -1.19
HDAC3-208ENST00000476739 PJVKQ0ZLH3 352 aa7.61□□□□□ -1.19
HDAC3-208ENST00000476739 MRGPRG-AS1Q2M3A8 158 aa7.61□□□□□ -1.19
HDAC3-208ENST00000476739 TMEM177Q53S58 311 aa7.61□□□□□ -1.19
HDAC3-208ENST00000476739 TREML4Q6UXN2 200 aa7.61□□□□□ -1.19
HDAC3-208ENST00000476739 C18orf65Q6ZTR6 163 aa7.61□□□□□ -1.19
HDAC3-208ENST00000476739 KCTD9Q7L273 389 aa7.61□□□□□ -1.19
HDAC3-208ENST00000476739 TMEM17Q86X19 198 aa7.61□□□□□ -1.19
HDAC3-208ENST00000476739 DEDD2Q8WXF8 326 aa7.61□□□□□ -1.19
HDAC3-208ENST00000476739 MOB3AQ96BX8 217 aa7.61□□□□□ -1.19
HDAC3-208ENST00000476739 DIRAS2Q96HU8 199 aa7.61□□□□□ -1.19
HDAC3-208ENST00000476739 HARBI1Q96MB7 349 aa7.61□□□□□ -1.19
HDAC3-208ENST00000476739 FAM103A1Q9BTL3 118 aaKnown RBP7.61□□□□□ -1.19
HDAC3-208ENST00000476739 TINAGL1Q9GZM7 467 aaPredicted RBP7.61□□□□□ -1.19
HDAC3-208ENST00000476739 FXYD6Q9H0Q3 95 aa7.61□□□□□ -1.19
HDAC3-208ENST00000476739 OR51J1Q9H342 316 aa7.61□□□□□ -1.19
HDAC3-208ENST00000476739 PARP11Q9NR21 331 aa7.61□□□□□ -1.19
HDAC3-208ENST00000476739 METTL1Q9UBP6 276 aaKnown RBP7.61□□□□□ -1.19
HDAC3-208ENST00000476739 MTFP1Q9UDX5 166 aa7.61□□□□□ -1.19
HDAC3-208ENST00000476739 WSB1Q9Y6I7 421 aa7.61□□□□□ -1.19
HDAC3-208ENST00000476739 TCRBV4S1A1TA0A5B7 111 aa7.6□□□□□ -1.19
HDAC3-208ENST00000476739 ARPC1BO15143 372 aaKnown RBP7.6□□□□□ -1.19
HDAC3-208ENST00000476739 RAMP3O60896 148 aa7.6□□□□□ -1.19
HDAC3-208ENST00000476739 SLC22A5O76082 557 aa7.6□□□□□ -1.19
HDAC3-208ENST00000476739 CA2P00918 260 aa7.6□□□□□ -1.19
HDAC3-208ENST00000476739 IFNA7P01567 189 aa7.6□□□□□ -1.19
HDAC3-208ENST00000476739 CD3DP04234 171 aa7.6□□□□□ -1.19
HDAC3-208ENST00000476739 IGF1P05019 195 aa7.6□□□□□ -1.19
HDAC3-208ENST00000476739 CSF1P09603 554 aa7.6□□□□□ -1.19
HDAC3-208ENST00000476739 TNFSF8P32971 234 aa7.6□□□□□ -1.19
HDAC3-208ENST00000476739 HOXA1P49639 335 aaPredicted RBP7.6□□□□□ -1.19
HDAC3-208ENST00000476739 IL18Q14116 193 aa7.6□□□□□ -1.19
HDAC3-208ENST00000476739 PLGLAQ15195 96 aa7.6□□□□□ -1.19
HDAC3-208ENST00000476739 RTL8BQ17RB0 113 aa7.6□□□□□ -1.19
HDAC3-208ENST00000476739 C2orf68Q2NKX9 166 aa7.6□□□□□ -1.19
HDAC3-208ENST00000476739 NDUFA11Q86Y39 141 aa7.6□□□□□ -1.19
HDAC3-208ENST00000476739 GDPD1Q8N9F7 314 aa7.6□□□□□ -1.19
HDAC3-208ENST00000476739 OR4X2Q8NGF9 303 aa7.6□□□□□ -1.19
HDAC3-208ENST00000476739 OR4D10Q8NGI6 311 aa7.6□□□□□ -1.19
HDAC3-208ENST00000476739 FAM110DQ8TAY7 271 aaPredicted RBP7.6□□□□□ -1.19
HDAC3-208ENST00000476739 TCTEX1D2Q8WW35 142 aa7.6□□□□□ -1.19
HDAC3-208ENST00000476739 ADTRPQ96IZ2 230 aa7.6□□□□□ -1.19
HDAC3-208ENST00000476739 TSNAXQ99598 290 aaKnown RBP7.6□□□□□ -1.19
HDAC3-208ENST00000476739 GABARAPH6UMI1 98 aa7.59□□□□□ -1.19
HDAC3-208ENST00000476739 SPDEFO95238 335 aa7.59□□□□□ -1.19
HDAC3-208ENST00000476739 SNAPINO95295 136 aa7.59□□□□□ -1.19
HDAC3-208ENST00000476739 RPLP1P05386 114 aaKnown RBP7.59□□□□□ -1.19
HDAC3-208ENST00000476739 RRASP10301 218 aa7.59□□□□□ -1.19
HDAC3-208ENST00000476739 PTBP1P26599 531 aaKnown RBP eCLIP7.59□□□□□ -1.19
HDAC3-208ENST00000476739 PPIFP30405 207 aaKnown RBP7.59□□□□□ -1.19
HDAC3-208ENST00000476739 LGALS7P47929 136 aa7.59□□□□□ -1.19
HDAC3-208ENST00000476739 HERV-K104P61576 105 aa7.59□□□□□ -1.19
HDAC3-208ENST00000476739 ASAH1Q13510 395 aa7.59□□□□□ -1.19
HDAC3-208ENST00000476739 MSMO1Q15800 293 aa7.59□□□□□ -1.19
HDAC3-208ENST00000476739 ECSCRQ19T08 205 aa7.59□□□□□ -1.19
HDAC3-208ENST00000476739 C19orf54Q5BKX5 351 aa7.59□□□□□ -1.19
HDAC3-208ENST00000476739 KHDC1LQ5JSQ8 128 aa7.59□□□□□ -1.19
HDAC3-208ENST00000476739 TOR2AQ5JU69 321 aa7.59□□□□□ -1.19
HDAC3-208ENST00000476739 CLLU1Q5K131 121 aa7.59□□□□□ -1.19
HDAC3-208ENST00000476739 AADACL3Q5VUY0 350 aa7.59□□□□□ -1.19
HDAC3-208ENST00000476739 PYHIN1Q6K0P9 492 aa7.59□□□□□ -1.19
HDAC3-208ENST00000476739 FAAP20Q6NZ36 180 aa7.59□□□□□ -1.19
HDAC3-208ENST00000476739 MZT2BQ6NZ67 158 aa7.59□□□□□ -1.19
HDAC3-208ENST00000476739 PPP1R27Q86WC6 154 aa7.59□□□□□ -1.19
HDAC3-208ENST00000476739 VKORC1L1Q8N0U8 176 aa7.59□□□□□ -1.19
HDAC3-208ENST00000476739 CASTOR1Q8WTX7 329 aa7.59□□□□□ -1.19
HDAC3-208ENST00000476739 FCAMRQ8WWV6 532 aa7.59□□□□□ -1.19
HDAC3-208ENST00000476739 HSD17B10Q99714 261 aaKnown RBP7.59□□□□□ -1.19
HDAC3-208ENST00000476739 SOSTQ9BQB4 213 aa7.59□□□□□ -1.19
HDAC3-208ENST00000476739 MED9Q9NWA0 146 aa7.59□□□□□ -1.19
HDAC3-208ENST00000476739 TSSC4Q9Y5U2 329 aaPredicted RBP7.59□□□□□ -1.19
HDAC3-208ENST00000476739 TNCP24821 2201 aa7.58□□□□□ -1.2
HDAC3-208ENST00000476739 TRAV41A0A0B4J266 112 aa7.58□□□□□ -1.2
HDAC3-208ENST00000476739 KRBOX1C9JBD0 128 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms