RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 FZR1Q9UM11 496 aa9.96□□□□□ -0.82
U2AF1-209ENST00000475639 ATXN7O15265 892 aaPredicted RBP9.95□□□□□ -0.82
U2AF1-209ENST00000475639 ATP6V0CP27449 155 aa9.95□□□□□ -0.82
U2AF1-209ENST00000475639 GLIPR1P48060 266 aa9.95□□□□□ -0.82
U2AF1-209ENST00000475639 SUMO2P61956 95 aaKnown RBP9.95□□□□□ -0.82
U2AF1-209ENST00000475639 SMAD4Q13485 552 aaKnown RBP9.95□□□□□ -0.82
U2AF1-209ENST00000475639 SPATA45Q537H7 98 aa9.95□□□□□ -0.82
U2AF1-209ENST00000475639 TEX38Q6PEX7 206 aa9.95□□□□□ -0.82
U2AF1-209ENST00000475639 ZAR1Q86SH2 424 aa9.95□□□□□ -0.82
U2AF1-209ENST00000475639 GAPTQ8N292 157 aa9.95□□□□□ -0.82
U2AF1-209ENST00000475639 LINC01555Q8NAE3 123 aa9.95□□□□□ -0.82
U2AF1-209ENST00000475639 APCDD1LQ8NCL9 501 aa9.95□□□□□ -0.82
U2AF1-209ENST00000475639 LSM10Q969L4 123 aaKnown RBP9.95□□□□□ -0.82
U2AF1-209ENST00000475639 LINC00470Q9BZP3 86 aa9.95□□□□□ -0.82
U2AF1-209ENST00000475639 TMEM56-RWDD3S4R434 201 aa9.95□□□□□ -0.82
U2AF1-209ENST00000475639 J3QT63 122 aa9.95□□□□□ -0.82
U2AF1-209ENST00000475639 OR4A5Q8NH83 315 aa9.95□□□□□ -0.82
U2AF1-209ENST00000475639 RNF7Q9UBF6 113 aa9.95□□□□□ -0.82
U2AF1-209ENST00000475639 PHLDA3Q9Y5J5 127 aa9.95□□□□□ -0.82
U2AF1-209ENST00000475639 A0A1B0GW64 132 aa9.95□□□□□ -0.82
U2AF1-209ENST00000475639 CCL20P78556 96 aa9.95□□□□□ -0.82
U2AF1-209ENST00000475639 PQLC2Q6ZP29 291 aa9.95□□□□□ -0.82
U2AF1-209ENST00000475639 KIR2DL4Q99706 377 aa9.95□□□□□ -0.82
U2AF1-209ENST00000475639 C1QTNF9BB2RNN3 333 aa9.95□□□□□ -0.82
U2AF1-209ENST00000475639 BCL2P10415 239 aa9.95□□□□□ -0.82
U2AF1-209ENST00000475639 RAC3P60763 192 aa9.95□□□□□ -0.82
U2AF1-209ENST00000475639 ECSCRQ19T08 205 aa9.95□□□□□ -0.82
U2AF1-209ENST00000475639 OR10AG1Q8NH19 301 aa9.95□□□□□ -0.82
U2AF1-209ENST00000475639 C10orf35Q96D05 121 aa9.95□□□□□ -0.82
U2AF1-209ENST00000475639 P2RX4Q99571 388 aa9.95□□□□□ -0.82
U2AF1-209ENST00000475639 WFDC1Q9HC57 220 aa9.95□□□□□ -0.82
U2AF1-209ENST00000475639 FANCMQ8IYD8 2048 aa9.95□□□□□ -0.82
U2AF1-209ENST00000475639 IGKV3D-15A0A087WSY6 115 aa9.94□□□□□ -0.82
U2AF1-209ENST00000475639 PRRT4C9JH25 899 aa9.94□□□□□ -0.82
U2AF1-209ENST00000475639 IGKV3-15P01624 115 aa9.94□□□□□ -0.82
U2AF1-209ENST00000475639 SLC35B1P78383 322 aa9.94□□□□□ -0.82
U2AF1-209ENST00000475639 ZIC1Q15915 447 aa9.94□□□□□ -0.82
U2AF1-209ENST00000475639 SAPCD1Q5SSQ6 148 aa9.94□□□□□ -0.82
U2AF1-209ENST00000475639 LINC00114Q6XXX2 140 aa9.94□□□□□ -0.82
U2AF1-209ENST00000475639 OR10S1Q8NGN2 331 aa9.94□□□□□ -0.82
U2AF1-209ENST00000475639 NT5CQ8TCD5 201 aa9.94□□□□□ -0.82
U2AF1-209ENST00000475639 MRPL24Q96A35 216 aaKnown RBP9.94□□□□□ -0.82
U2AF1-209ENST00000475639 LINC00615Q96LM1 132 aaPredicted RBP9.94□□□□□ -0.82
U2AF1-209ENST00000475639 METTL26Q96S19 204 aa9.94□□□□□ -0.82
U2AF1-209ENST00000475639 RTBDNQ9BSG5 229 aaPredicted RBP9.94□□□□□ -0.82
U2AF1-209ENST00000475639 WNT16Q9UBV4 365 aa9.94□□□□□ -0.82
U2AF1-209ENST00000475639 CDIPTO14735 213 aa9.94□□□□□ -0.82
U2AF1-209ENST00000475639 SRFP11831 508 aa9.94□□□□□ -0.82
U2AF1-209ENST00000475639 MDKP21741 143 aaPredicted RBP9.94□□□□□ -0.82
U2AF1-209ENST00000475639 RPL27AP46776 148 aaKnown RBP9.94□□□□□ -0.82
U2AF1-209ENST00000475639 RPS20P60866 119 aaKnown RBP9.94□□□□□ -0.82
U2AF1-209ENST00000475639 FOXC1Q12948 553 aa9.94□□□□□ -0.82
U2AF1-209ENST00000475639 ASCL5Q7RTU5 278 aa9.94□□□□□ -0.82
U2AF1-209ENST00000475639 GLRX2Q9NS18 164 aa9.94□□□□□ -0.82
U2AF1-209ENST00000475639 SEMA5BQ9P283 1151 aa9.94□□□□□ -0.82
U2AF1-209ENST00000475639 MPDZO75970 2070 aa9.94□□□□□ -0.82
U2AF1-209ENST00000475639 SCN10AQ9Y5Y9 1956 aa9.94□□□□□ -0.82
U2AF1-209ENST00000475639 LAMA2P24043 3122 aaKnown RBP9.94□□□□□ -0.82
U2AF1-209ENST00000475639 MMP9P14780 707 aa9.94□□□□□ -0.82
U2AF1-209ENST00000475639 CTLA4P16410 223 aa9.94□□□□□ -0.82
U2AF1-209ENST00000475639 IGFBP3P17936 291 aaPredicted RBP9.94□□□□□ -0.82
U2AF1-209ENST00000475639 MFAP4P55083 255 aa9.94□□□□□ -0.82
U2AF1-209ENST00000475639 IL11RAQ14626 422 aa9.94□□□□□ -0.82
U2AF1-209ENST00000475639 IBA57Q5T440 356 aaKnown RBP9.94□□□□□ -0.82
U2AF1-209ENST00000475639 NFAM1Q8NET5 270 aaPredicted RBP9.94□□□□□ -0.82
U2AF1-209ENST00000475639 C16orf92Q96LL3 132 aa9.94□□□□□ -0.82
U2AF1-209ENST00000475639 WIPI2Q9Y4P8 454 aa9.94□□□□□ -0.82
U2AF1-209ENST00000475639 SHISA8B8ZZ34 492 aa9.94□□□□□ -0.82
U2AF1-209ENST00000475639 CEACAM5P06731 702 aa9.94□□□□□ -0.82
U2AF1-209ENST00000475639 TTC9CQ8N5M4 171 aa9.94□□□□□ -0.82
U2AF1-209ENST00000475639 DIRC2Q96SL1 478 aa9.94□□□□□ -0.82
U2AF1-209ENST00000475639 PGPEP1Q9NXJ5 209 aa9.94□□□□□ -0.82
U2AF1-209ENST00000475639 THSD7BQ9C0I4 1608 aa9.94□□□□□ -0.82
U2AF1-209ENST00000475639 KIF26BQ2KJY2 2108 aa9.93□□□□□ -0.82
U2AF1-209ENST00000475639 CYB5R3P00387 301 aaPredicted RBP9.93□□□□□ -0.82
U2AF1-209ENST00000475639 ARF6P62330 175 aa9.93□□□□□ -0.82
U2AF1-209ENST00000475639 SLC23A3Q6PIS1 610 aa9.93□□□□□ -0.82
U2AF1-209ENST00000475639 PEF1Q9UBV8 284 aaKnown RBP9.93□□□□□ -0.82
U2AF1-209ENST00000475639 A0A1B0GWB2 263 aa9.93□□□□□ -0.82
U2AF1-209ENST00000475639 UBALD2Q8IYN6 164 aa9.93□□□□□ -0.82
U2AF1-209ENST00000475639 CYYR1Q96J86 154 aa9.93□□□□□ -0.82
U2AF1-209ENST00000475639 PMCHL2Q9BQD1 86 aa9.93□□□□□ -0.82
U2AF1-209ENST00000475639 WNK1Q9H4A3 2382 aa9.93□□□□□ -0.82
U2AF1-209ENST00000475639 CEACAM18A8MTB9 384 aa9.93□□□□□ -0.82
U2AF1-209ENST00000475639 METTL12A8MUP2 240 aa9.93□□□□□ -0.82
U2AF1-209ENST00000475639 TFPI2P48307 235 aa9.93□□□□□ -0.82
U2AF1-209ENST00000475639 C16orf82Q7Z2V1 217 aa9.93□□□□□ -0.82
U2AF1-209ENST00000475639 NEUROG1Q92886 237 aa9.93□□□□□ -0.82
U2AF1-209ENST00000475639 TUBD1Q9UJT1 453 aa9.93□□□□□ -0.82
U2AF1-209ENST00000475639 SPTY2D1-AS1A0A0U1RR47 76 aa9.92□□□□□ -0.82
U2AF1-209ENST00000475639 NKX2-6A6NCS4 301 aa9.92□□□□□ -0.82
U2AF1-209ENST00000475639 TMEM210A6NLX4 147 aa9.92□□□□□ -0.82
U2AF1-209ENST00000475639 EML2O95834 649 aa9.92□□□□□ -0.82
U2AF1-209ENST00000475639 SRP19P09132 144 aaKnown RBP9.92□□□□□ -0.82
U2AF1-209ENST00000475639 PATE4P0C8F1 98 aa9.92□□□□□ -0.82
U2AF1-209ENST00000475639 RND3P61587 244 aa9.92□□□□□ -0.82
U2AF1-209ENST00000475639 UNC119Q13432 240 aa9.92□□□□□ -0.82
U2AF1-209ENST00000475639 TMEM171Q8WVE6 324 aa9.92□□□□□ -0.82
U2AF1-209ENST00000475639 ARRDC1-AS1Q9H2J1 176 aa9.92□□□□□ -0.82
U2AF1-209ENST00000475639 IGKV3D-11A0A0A0MRZ8 115 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms