RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 HDHD3Q9BSH5 251 aaPredicted RBP3.81□□□□□ -1.8
SNRNP40-204ENST00000474025 TM2D1Q9BX74 207 aa3.81□□□□□ -1.8
SNRNP40-204ENST00000474025 TMEM59Q9BXS4 323 aa3.81□□□□□ -1.8
SNRNP40-204ENST00000474025 KCNK15Q9H427 330 aa3.81□□□□□ -1.8
SNRNP40-204ENST00000474025 CHMP1AQ9HD42 196 aaPredicted RBP3.81□□□□□ -1.8
SNRNP40-204ENST00000474025 BABAM2Q9NXR7 383 aa3.81□□□□□ -1.8
SNRNP40-204ENST00000474025 GHRLQ9UBU3 117 aa3.81□□□□□ -1.8
SNRNP40-204ENST00000474025 MLXQ9UH92 298 aa3.81□□□□□ -1.8
SNRNP40-204ENST00000474025 CLEC2DQ9UHP7 191 aa3.81□□□□□ -1.8
SNRNP40-204ENST00000474025 ZNF221Q9UK13 617 aa3.81□□□□□ -1.8
SNRNP40-204ENST00000474025 MUC4Q99102 2169 aa3.8□□□□□ -1.8
SNRNP40-204ENST00000474025 FAT1Q14517 4588 aa3.8□□□□□ -1.8
SNRNP40-204ENST00000474025 PNMA8CA0A1B0GUJ8 204 aa3.8□□□□□ -1.8
SNRNP40-204ENST00000474025 LOC100130705A0A1B0GUX0 176 aa3.8□□□□□ -1.8
SNRNP40-204ENST00000474025 A8MWP6 167 aa3.8□□□□□ -1.8
SNRNP40-204ENST00000474025 UBE2CO00762 179 aa3.8□□□□□ -1.8
SNRNP40-204ENST00000474025 MPPED1O15442 326 aa3.8□□□□□ -1.8
SNRNP40-204ENST00000474025 OR2J3O76001 311 aa3.8□□□□□ -1.8
SNRNP40-204ENST00000474025 SCAF4O95104 1147 aaKnown RBP3.8□□□□□ -1.8
SNRNP40-204ENST00000474025 OR2C1O95371 312 aa3.8□□□□□ -1.8
SNRNP40-204ENST00000474025 SCTP09683 121 aa3.8□□□□□ -1.8
SNRNP40-204ENST00000474025 UBBP0CG47 229 aa3.8□□□□□ -1.8
SNRNP40-204ENST00000474025 MYL12AP19105 171 aa3.8□□□□□ -1.8
SNRNP40-204ENST00000474025 APOC4P55056 127 aa3.8□□□□□ -1.8
SNRNP40-204ENST00000474025 UBE2KP61086 200 aa3.8□□□□□ -1.8
SNRNP40-204ENST00000474025 QRFPP83859 136 aa3.8□□□□□ -1.8
SNRNP40-204ENST00000474025 TNXAQ16473 311 aa3.8□□□□□ -1.8
SNRNP40-204ENST00000474025 ANKRD55Q3KP44 614 aa3.8□□□□□ -1.8
SNRNP40-204ENST00000474025 FAM209BQ5JX69 171 aa3.8□□□□□ -1.8
SNRNP40-204ENST00000474025 C10orf55Q5SWW7 151 aa3.8□□□□□ -1.8
SNRNP40-204ENST00000474025 CFAP161Q6P656 301 aa3.8□□□□□ -1.8
SNRNP40-204ENST00000474025 BTNL8Q6UX41 500 aa3.8□□□□□ -1.8
SNRNP40-204ENST00000474025 IDO2Q6ZQW0 420 aa3.8□□□□□ -1.8
SNRNP40-204ENST00000474025 C19orf35Q6ZS72 473 aa3.8□□□□□ -1.8
SNRNP40-204ENST00000474025 CEACAM19Q7Z692 300 aa3.8□□□□□ -1.8
SNRNP40-204ENST00000474025 GPHB5Q86YW7 130 aa3.8□□□□□ -1.8
SNRNP40-204ENST00000474025 TMEM217Q8N7C4 229 aa3.8□□□□□ -1.8
SNRNP40-204ENST00000474025 TEX45Q8NA69 505 aa3.8□□□□□ -1.8
SNRNP40-204ENST00000474025 PYDC1Q8WXC3 89 aa3.8□□□□□ -1.8
SNRNP40-204ENST00000474025 THRSPQ92748 146 aa3.8□□□□□ -1.8
SNRNP40-204ENST00000474025 GGHQ92820 318 aa3.8□□□□□ -1.8
SNRNP40-204ENST00000474025 TRIM63Q969Q1 353 aa3.8□□□□□ -1.8
SNRNP40-204ENST00000474025 RNF183Q96D59 192 aa3.8□□□□□ -1.8
SNRNP40-204ENST00000474025 RIMS4Q9H426 269 aaPredicted RBP3.8□□□□□ -1.8
SNRNP40-204ENST00000474025 Q9N2K0 584 aa3.8□□□□□ -1.8
SNRNP40-204ENST00000474025 C12orf4Q9NQ89 552 aa3.8□□□□□ -1.8
SNRNP40-204ENST00000474025 SDHAF2Q9NX18 166 aa3.8□□□□□ -1.8
SNRNP40-204ENST00000474025 RDH8Q9NYR8 311 aa3.8□□□□□ -1.8
SNRNP40-204ENST00000474025 AK3Q9UIJ7 227 aa3.8□□□□□ -1.8
SNRNP40-204ENST00000474025 MGAT4AQ9UM21 535 aa3.8□□□□□ -1.8
SNRNP40-204ENST00000474025 DIMT1Q9UNQ2 313 aaKnown RBP3.8□□□□□ -1.8
SNRNP40-204ENST00000474025 EXOSC1Q9Y3B2 195 aaKnown RBP3.8□□□□□ -1.8
SNRNP40-204ENST00000474025 TRAV25A0A0B4J276 109 aa3.79□□□□□ -1.8
SNRNP40-204ENST00000474025 KIR2DL5BA0A0G2JN68 375 aa3.79□□□□□ -1.8
SNRNP40-204ENST00000474025 KIR2DL5BA0A0G2JPC4 375 aa3.79□□□□□ -1.8
SNRNP40-204ENST00000474025 A0A1B0GVY2 172 aa3.79□□□□□ -1.8
SNRNP40-204ENST00000474025 PRSS47A8MTI9 375 aa3.79□□□□□ -1.8
SNRNP40-204ENST00000474025 FOXI3A8MTJ6 420 aaPredicted RBP3.79□□□□□ -1.8
SNRNP40-204ENST00000474025 TMEM14DPA8MWL7 114 aa3.79□□□□□ -1.8
SNRNP40-204ENST00000474025 TEX22C9J3V5 150 aa3.79□□□□□ -1.8
SNRNP40-204ENST00000474025 SOCS1O15524 211 aa3.79□□□□□ -1.8
SNRNP40-204ENST00000474025 CRYZL1O95825 349 aa3.79□□□□□ -1.8
SNRNP40-204ENST00000474025 SAA1P0DJI8 122 aaPredicted RBP3.79□□□□□ -1.8
SNRNP40-204ENST00000474025 SRMP19623 302 aa3.79□□□□□ -1.8
SNRNP40-204ENST00000474025 TCTAP57738 103 aa3.79□□□□□ -1.8
SNRNP40-204ENST00000474025 TAS2R43P59537 309 aa3.79□□□□□ -1.8
SNRNP40-204ENST00000474025 CBX3Q13185 183 aa3.79□□□□□ -1.8
SNRNP40-204ENST00000474025 INSL4Q14641 139 aa3.79□□□□□ -1.8
SNRNP40-204ENST00000474025 RTL8BQ17RB0 113 aa3.79□□□□□ -1.8
SNRNP40-204ENST00000474025 KRTAP19-4Q3LI73 84 aa3.79□□□□□ -1.8
SNRNP40-204ENST00000474025 VMA21Q3ZAQ7 101 aa3.79□□□□□ -1.8
SNRNP40-204ENST00000474025 C1orf100Q5SVJ3 147 aa3.79□□□□□ -1.8
SNRNP40-204ENST00000474025 LRRTM1Q86UE6 522 aa3.79□□□□□ -1.8
SNRNP40-204ENST00000474025 KIR2DL5AQ8N109 375 aa3.79□□□□□ -1.8
SNRNP40-204ENST00000474025 FAM89BQ8N5H3 189 aa3.79□□□□□ -1.8
SNRNP40-204ENST00000474025 TTC9CQ8N5M4 171 aa3.79□□□□□ -1.8
SNRNP40-204ENST00000474025 UXS1Q8NBZ7 420 aa3.79□□□□□ -1.8
SNRNP40-204ENST00000474025 OR1L6Q8NGR2 347 aa3.79□□□□□ -1.8
SNRNP40-204ENST00000474025 KIR2DL5BQ8NHK3 375 aa3.79□□□□□ -1.8
SNRNP40-204ENST00000474025 ACOT12Q8WYK0 555 aa3.79□□□□□ -1.8
SNRNP40-204ENST00000474025 SPIN2AQ99865 258 aa3.79□□□□□ -1.8
SNRNP40-204ENST00000474025 SPIN2BQ9BPZ2 258 aa3.79□□□□□ -1.8
SNRNP40-204ENST00000474025 LPAR5Q9H1C0 372 aa3.79□□□□□ -1.8
SNRNP40-204ENST00000474025 OR2D2Q9H210 308 aa3.79□□□□□ -1.8
SNRNP40-204ENST00000474025 ZNF430Q9H8G1 570 aaPredicted RBP3.79□□□□□ -1.8
SNRNP40-204ENST00000474025 PLEKHJ1Q9NW61 149 aa3.79□□□□□ -1.8
SNRNP40-204ENST00000474025 ZNF257Q9Y2Q1 563 aa3.79□□□□□ -1.8
SNRNP40-204ENST00000474025 A0A1B0GW64 132 aa3.78□□□□□ -1.8
SNRNP40-204ENST00000474025 IRGMA1A4Y4 181 aa3.78□□□□□ -1.8
SNRNP40-204ENST00000474025 ZNF320A2RRD8 509 aa3.78□□□□□ -1.8
SNRNP40-204ENST00000474025 HMX3A6NHT5 357 aa3.78□□□□□ -1.8
SNRNP40-204ENST00000474025 LINC00473A8K010 186 aa3.78□□□□□ -1.8
SNRNP40-204ENST00000474025 NPIPB5A8MRT5 1133 aa3.78□□□□□ -1.8
SNRNP40-204ENST00000474025 TRDCB7Z8K6 153 aa3.78□□□□□ -1.8
SNRNP40-204ENST00000474025 BET1O15155 118 aa3.78□□□□□ -1.8
SNRNP40-204ENST00000474025 CREBL2O60519 120 aaPredicted RBP3.78□□□□□ -1.8
SNRNP40-204ENST00000474025 ACTL6BO94805 426 aa3.78□□□□□ -1.8
SNRNP40-204ENST00000474025 S1PR2O95136 353 aa3.78□□□□□ -1.8
SNRNP40-204ENST00000474025 IGHV3-23P01764 117 aa3.78□□□□□ -1.8
SNRNP40-204ENST00000474025 CD1AP06126 327 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms