RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 YLPM1P49750 1951 aaKnown RBP7.62□□□□□ -1.19
VPS52-216ENST00000471309 IGSF23A1L1A6 192 aa7.61□□□□□ -1.19
VPS52-216ENST00000471309 C15orf61A6NNL5 157 aa7.61□□□□□ -1.19
VPS52-216ENST00000471309 CHST1O43916 411 aa7.61□□□□□ -1.19
VPS52-216ENST00000471309 SPDEFO95238 335 aa7.61□□□□□ -1.19
VPS52-216ENST00000471309 LY86O95711 162 aa7.61□□□□□ -1.19
VPS52-216ENST00000471309 CFDP00746 253 aaPredicted RBP7.61□□□□□ -1.19
VPS52-216ENST00000471309 GAPDHP04406 335 aaKnown RBP7.61□□□□□ -1.19
VPS52-216ENST00000471309 IGKV1-16P04430 117 aa7.61□□□□□ -1.19
VPS52-216ENST00000471309 TPT1P13693 172 aaKnown RBP7.61□□□□□ -1.19
VPS52-216ENST00000471309 REG1BP48304 166 aa7.61□□□□□ -1.19
VPS52-216ENST00000471309 CAV2P51636 162 aa7.61□□□□□ -1.19
VPS52-216ENST00000471309 PAX9P55771 341 aa7.61□□□□□ -1.19
VPS52-216ENST00000471309 UBE2KP61086 200 aa7.61□□□□□ -1.19
VPS52-216ENST00000471309 EIF5AP63241 154 aaKnown RBP7.61□□□□□ -1.19
VPS52-216ENST00000471309 LCN2P80188 198 aa7.61□□□□□ -1.19
VPS52-216ENST00000471309 RELBQ01201 579 aa7.61□□□□□ -1.19
VPS52-216ENST00000471309 EWSR1Q01844 656 aaKnown RBP eCLIP7.61□□□□□ -1.19
VPS52-216ENST00000471309 DIAPH2-AS1Q14236 149 aa7.61□□□□□ -1.19
VPS52-216ENST00000471309 ZNF787Q6DD87 383 aa7.61□□□□□ -1.19
VPS52-216ENST00000471309 HCP5Q6MZN7 132 aa7.61□□□□□ -1.19
VPS52-216ENST00000471309 VMO1Q7Z5L0 202 aa7.61□□□□□ -1.19
VPS52-216ENST00000471309 PNKDQ8N490 385 aa7.61□□□□□ -1.19
VPS52-216ENST00000471309 TMEM252Q8N6L7 170 aa7.61□□□□□ -1.19
VPS52-216ENST00000471309 OR52E5Q8NH55 327 aa7.61□□□□□ -1.19
VPS52-216ENST00000471309 SCARB1Q8WTV0 552 aa7.61□□□□□ -1.19
VPS52-216ENST00000471309 NRGNQ92686 78 aa7.61□□□□□ -1.19
VPS52-216ENST00000471309 PERPQ96FX8 193 aa7.61□□□□□ -1.19
VPS52-216ENST00000471309 SMIM8Q96KF7 97 aa7.61□□□□□ -1.19
VPS52-216ENST00000471309 RHOVQ96L33 236 aa7.61□□□□□ -1.19
VPS52-216ENST00000471309 SIRPDQ9H106 197 aa7.61□□□□□ -1.19
VPS52-216ENST00000471309 RBKSQ9H477 322 aa7.61□□□□□ -1.19
VPS52-216ENST00000471309 SIRT7Q9NRC8 400 aa7.61□□□□□ -1.19
VPS52-216ENST00000471309 IGHV4-30-2A0A087WSY4 118 aa7.6□□□□□ -1.19
VPS52-216ENST00000471309 IGHV4-61A0A0C4DH41 118 aa7.6□□□□□ -1.19
VPS52-216ENST00000471309 FAM24AA6NFZ4 105 aa7.6□□□□□ -1.19
VPS52-216ENST00000471309 LY6LH3BQJ8 138 aa7.6□□□□□ -1.19
VPS52-216ENST00000471309 H7C2Y5 167 aa7.6□□□□□ -1.19
VPS52-216ENST00000471309 RBMXL2O75526 392 aaKnown RBP7.6□□□□□ -1.19
VPS52-216ENST00000471309 IL6RP08887 468 aaPredicted RBP7.6□□□□□ -1.19
VPS52-216ENST00000471309 SLC25A16P16260 332 aa7.6□□□□□ -1.19
VPS52-216ENST00000471309 HTR1DP28221 377 aa7.6□□□□□ -1.19
VPS52-216ENST00000471309 CEACAM3P40198 252 aa7.6□□□□□ -1.19
VPS52-216ENST00000471309 DLX1P56177 255 aa7.6□□□□□ -1.19
VPS52-216ENST00000471309 OR2B8PP59922 312 aa7.6□□□□□ -1.19
VPS52-216ENST00000471309 NDUFA5Q16718 116 aa7.6□□□□□ -1.19
VPS52-216ENST00000471309 TPTE2P1Q5T6R2 138 aa7.6□□□□□ -1.19
VPS52-216ENST00000471309 SSX9Q7RTT3 188 aa7.6□□□□□ -1.19
VPS52-216ENST00000471309 STX12Q86Y82 276 aa7.6□□□□□ -1.19
VPS52-216ENST00000471309 LURAP1LQ8IV03 231 aa7.6□□□□□ -1.19
VPS52-216ENST00000471309 VKORC1L1Q8N0U8 176 aa7.6□□□□□ -1.19
VPS52-216ENST00000471309 STPG2Q8N412 459 aa7.6□□□□□ -1.19
VPS52-216ENST00000471309 OR4C13Q8NGP0 309 aa7.6□□□□□ -1.19
VPS52-216ENST00000471309 OR4A16Q8NH70 328 aa7.6□□□□□ -1.19
VPS52-216ENST00000471309 DTD1Q8TEA8 209 aa7.6□□□□□ -1.19
VPS52-216ENST00000471309 RPEQ96AT9 228 aa7.6□□□□□ -1.19
VPS52-216ENST00000471309 FLYWCH2Q96CP2 140 aaKnown RBP7.6□□□□□ -1.19
VPS52-216ENST00000471309 HARBI1Q96MB7 349 aa7.6□□□□□ -1.19
VPS52-216ENST00000471309 CIB3Q96Q77 187 aaPredicted RBP7.6□□□□□ -1.19
VPS52-216ENST00000471309 BEX4Q9NWD9 120 aaPredicted RBP7.6□□□□□ -1.19
VPS52-216ENST00000471309 BET1LQ9NYM9 111 aa7.6□□□□□ -1.19
VPS52-216ENST00000471309 FOXA2Q9Y261 457 aaPredicted RBP7.6□□□□□ -1.19
VPS52-216ENST00000471309 IGHV1-3A0A0C4DH29 117 aa7.59□□□□□ -1.19
VPS52-216ENST00000471309 A0A1W2PPI3 338 aa7.59□□□□□ -1.19
VPS52-216ENST00000471309 RPS10-NUDT3A0A1W2PQS6 291 aa7.59□□□□□ -1.19
VPS52-216ENST00000471309 LEUTXA8MZ59 168 aa7.59□□□□□ -1.19
VPS52-216ENST00000471309 OOSP1A8MZH6 123 aa7.59□□□□□ -1.19
VPS52-216ENST00000471309 FAM157AC9JC47 383 aa7.59□□□□□ -1.19
VPS52-216ENST00000471309 UPK2O00526 184 aa7.59□□□□□ -1.19
VPS52-216ENST00000471309 SHOXO15266 292 aa7.59□□□□□ -1.19
VPS52-216ENST00000471309 JTBO76095 146 aa7.59□□□□□ -1.19
VPS52-216ENST00000471309 SCAF4O95104 1147 aaKnown RBP7.59□□□□□ -1.19
VPS52-216ENST00000471309 ARG1P05089 322 aa7.59□□□□□ -1.19
VPS52-216ENST00000471309 FGF2P09038 288 aa7.59□□□□□ -1.19
VPS52-216ENST00000471309 SAA1P0DJI8 122 aaPredicted RBP7.59□□□□□ -1.19
VPS52-216ENST00000471309 IAPPP10997 89 aa7.59□□□□□ -1.19
VPS52-216ENST00000471309 HOXB4P17483 251 aaPredicted RBP7.59□□□□□ -1.19
VPS52-216ENST00000471309 COL8A1P27658 744 aa7.59□□□□□ -1.19
VPS52-216ENST00000471309 HTR2BP41595 481 aa7.59□□□□□ -1.19
VPS52-216ENST00000471309 SULT1A1P50225 295 aa7.59□□□□□ -1.19
VPS52-216ENST00000471309 DVL1P1P54792 670 aaPredicted RBP7.59□□□□□ -1.19
VPS52-216ENST00000471309 SPCS3P61009 180 aa7.59□□□□□ -1.19
VPS52-216ENST00000471309 PRB3Q04118 309 aaPredicted RBP7.59□□□□□ -1.19
VPS52-216ENST00000471309 CLLU1Q5K131 121 aa7.59□□□□□ -1.19
VPS52-216ENST00000471309 RPL7L1Q6DKI1 246 aaKnown RBP7.59□□□□□ -1.19
VPS52-216ENST00000471309 ALKAL2Q6UX46 152 aa7.59□□□□□ -1.19
VPS52-216ENST00000471309 BAP18Q8IXM2 172 aa7.59□□□□□ -1.19
VPS52-216ENST00000471309 PUSL1Q8N0Z8 303 aaKnown RBP7.59□□□□□ -1.19
VPS52-216ENST00000471309 LRRC75A-AS1Q8N1F1 130 aa7.59□□□□□ -1.19
VPS52-216ENST00000471309 OR4A5Q8NH83 315 aa7.59□□□□□ -1.19
VPS52-216ENST00000471309 VSTM2AQ8TAG5 236 aa7.59□□□□□ -1.19
VPS52-216ENST00000471309 LHX4Q969G2 390 aa7.59□□□□□ -1.19
VPS52-216ENST00000471309 QTRT1Q9BXR0 403 aaKnown RBP7.59□□□□□ -1.19
VPS52-216ENST00000471309 MS4A7Q9GZW8 240 aaPredicted RBP7.59□□□□□ -1.19
VPS52-216ENST00000471309 MMP26Q9NRE1 261 aa7.59□□□□□ -1.19
VPS52-216ENST00000471309 TMEM14BQ9NUH8 114 aa7.59□□□□□ -1.19
VPS52-216ENST00000471309 PSENENQ9NZ42 101 aa7.59□□□□□ -1.19
VPS52-216ENST00000471309 PRNDQ9UKY0 176 aa7.59□□□□□ -1.19
VPS52-216ENST00000471309 ZNF257Q9Y2Q1 563 aa7.59□□□□□ -1.19
VPS52-216ENST00000471309 PTPN13Q12923 2485 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms