RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 CCL20P78556 96 aa2.86□□□□□ -1.95
SORT1-202ENST00000466471 EWSR1Q01844 656 aaKnown RBP eCLIP2.86□□□□□ -1.95
SORT1-202ENST00000466471 PAX5Q02548 391 aa2.86□□□□□ -1.95
SORT1-202ENST00000466471 ZNF92Q03936 586 aa2.86□□□□□ -1.95
SORT1-202ENST00000466471 Q0VFX4 171 aa2.86□□□□□ -1.95
SORT1-202ENST00000466471 MFAP5Q13361 173 aa2.86□□□□□ -1.95
SORT1-202ENST00000466471 FAM53BQ14153 422 aa2.86□□□□□ -1.95
SORT1-202ENST00000466471 EIF2B1Q14232 305 aaKnown RBP2.86□□□□□ -1.95
SORT1-202ENST00000466471 HERPUD1Q15011 391 aa2.86□□□□□ -1.95
SORT1-202ENST00000466471 ODF4Q2M2E3 257 aa2.86□□□□□ -1.95
SORT1-202ENST00000466471 PRTGQ2VWP7 1150 aa2.86□□□□□ -1.95
SORT1-202ENST00000466471 SLC22A6Q4U2R8 563 aa2.86□□□□□ -1.95
SORT1-202ENST00000466471 SLC25A53Q5H9E4 307 aa2.86□□□□□ -1.95
SORT1-202ENST00000466471 WDR25Q64LD2 544 aaPredicted RBP2.86□□□□□ -1.95
SORT1-202ENST00000466471 OR4A47Q6IF82 309 aa2.86□□□□□ -1.95
SORT1-202ENST00000466471 ZNF774Q6NX45 483 aa2.86□□□□□ -1.95
SORT1-202ENST00000466471 DNM1P34Q6PK57 102 aa2.86□□□□□ -1.95
SORT1-202ENST00000466471 PLXDC2Q6UX71 529 aa2.86□□□□□ -1.95
SORT1-202ENST00000466471 TOMM20LQ6UXN7 152 aa2.86□□□□□ -1.95
SORT1-202ENST00000466471 C16orf47Q6ZP98 133 aaPredicted RBP2.86□□□□□ -1.95
SORT1-202ENST00000466471 FOXL2NBQ6ZUU3 175 aa2.86□□□□□ -1.95
SORT1-202ENST00000466471 IL17RELQ6ZVW7 336 aa2.86□□□□□ -1.95
SORT1-202ENST00000466471 ABHD12BQ7Z5M8 362 aaPredicted RBP2.86□□□□□ -1.95
SORT1-202ENST00000466471 TMEM144Q7Z5S9 345 aa2.86□□□□□ -1.95
SORT1-202ENST00000466471 RTN4RL2Q86UN3 420 aa2.86□□□□□ -1.95
SORT1-202ENST00000466471 STHQ8IWL8 128 aa2.86□□□□□ -1.95
SORT1-202ENST00000466471 ODF3L1Q8IXM7 274 aa2.86□□□□□ -1.95
SORT1-202ENST00000466471 ZNF100Q8IYN0 542 aa2.86□□□□□ -1.95
SORT1-202ENST00000466471 GBGT1Q8N5D6 347 aa2.86□□□□□ -1.95
SORT1-202ENST00000466471 TMEM252Q8N6L7 170 aa2.86□□□□□ -1.95
SORT1-202ENST00000466471 SLC35G3Q8N808 338 aa2.86□□□□□ -1.95
SORT1-202ENST00000466471 OR4C3Q8NH37 302 aa2.86□□□□□ -1.95
SORT1-202ENST00000466471 OR2V1Q8NHB1 315 aa2.86□□□□□ -1.95
SORT1-202ENST00000466471 MFSD8Q8NHS3 518 aa2.86□□□□□ -1.95
SORT1-202ENST00000466471 CD300LFQ8TDQ1 290 aa2.86□□□□□ -1.95
SORT1-202ENST00000466471 MRGPRDQ8TDS7 321 aa2.86□□□□□ -1.95
SORT1-202ENST00000466471 TSACCQ96A04 125 aaPredicted RBP2.86□□□□□ -1.95
SORT1-202ENST00000466471 ADAT3Q96EY9 351 aaPredicted RBP2.86□□□□□ -1.95
SORT1-202ENST00000466471 GMPPAQ96IJ6 420 aaPredicted RBP2.86□□□□□ -1.95
SORT1-202ENST00000466471 BMFQ96LC9 184 aa2.86□□□□□ -1.95
SORT1-202ENST00000466471 RARRES2Q99969 163 aa2.86□□□□□ -1.95
SORT1-202ENST00000466471 MIEN1Q9BRT3 115 aa2.86□□□□□ -1.95
SORT1-202ENST00000466471 MAGT1Q9H0U3 335 aa2.86□□□□□ -1.95
SORT1-202ENST00000466471 KLK15Q9H2R5 256 aa2.86□□□□□ -1.95
SORT1-202ENST00000466471 RBKSQ9H477 322 aa2.86□□□□□ -1.95
SORT1-202ENST00000466471 METTL8Q9H825 291 aaKnown RBP2.86□□□□□ -1.95
SORT1-202ENST00000466471 PHPT1Q9NRX4 125 aaPredicted RBP2.86□□□□□ -1.95
SORT1-202ENST00000466471 IL36GQ9NZH8 169 aa2.86□□□□□ -1.95
SORT1-202ENST00000466471 C1RLQ9NZP8 487 aa2.86□□□□□ -1.95
SORT1-202ENST00000466471 GAB2Q9UQC2 676 aa2.86□□□□□ -1.95
SORT1-202ENST00000466471 C14orf166Q9Y224 244 aaKnown RBP2.86□□□□□ -1.95
SORT1-202ENST00000466471 RCL1Q9Y2P8 373 aaKnown RBP2.86□□□□□ -1.95
SORT1-202ENST00000466471 RNF115Q9Y4L5 304 aa2.86□□□□□ -1.95
SORT1-202ENST00000466471 TIMM9Q9Y5J7 89 aa2.86□□□□□ -1.95
SORT1-202ENST00000466471 PUS1Q9Y606 427 aaKnown RBP eCLIP2.86□□□□□ -1.95
SORT1-202ENST00000466471 TRPM6Q9BX84 2022 aa2.86□□□□□ -1.95
SORT1-202ENST00000466471 NUP214P35658 2090 aaPredicted RBP2.86□□□□□ -1.95
SORT1-202ENST00000466471 CMYA5Q8N3K9 4069 aa2.86□□□□□ -1.95
SORT1-202ENST00000466471 SAA2-SAA4A0A096LPE2 208 aa2.85□□□□□ -1.95
SORT1-202ENST00000466471 NPIPA5A0A0B4J1W7 369 aa2.85□□□□□ -1.95
SORT1-202ENST00000466471 IGKV1-9A0A0C4DH69 117 aa2.85□□□□□ -1.95
SORT1-202ENST00000466471 A0A0G2JNG1 304 aa2.85□□□□□ -1.95
SORT1-202ENST00000466471 A0A0U1RQV5 110 aa2.85□□□□□ -1.95
SORT1-202ENST00000466471 XKRY2A2RUG3 117 aa2.85□□□□□ -1.95
SORT1-202ENST00000466471 FRG2CA6NGY1 282 aa2.85□□□□□ -1.95
SORT1-202ENST00000466471 NKX6-3A6NJ46 265 aa2.85□□□□□ -1.95
SORT1-202ENST00000466471 ZNF727A8MUV8 499 aa2.85□□□□□ -1.95
SORT1-202ENST00000466471 PRSS46E5RG02 174 aa2.85□□□□□ -1.95
SORT1-202ENST00000466471 NPIPA7E9PJI5 369 aa2.85□□□□□ -1.95
SORT1-202ENST00000466471 H0YGG7 62 aa2.85□□□□□ -1.95
SORT1-202ENST00000466471 H0YIG0 161 aa2.85□□□□□ -1.95
SORT1-202ENST00000466471 NDUFS8O00217 210 aa2.85□□□□□ -1.95
SORT1-202ENST00000466471 XKRYO14609 159 aa2.85□□□□□ -1.95
SORT1-202ENST00000466471 AGPAT2O15120 278 aa2.85□□□□□ -1.95
SORT1-202ENST00000466471 SOCS1O15524 211 aa2.85□□□□□ -1.95
SORT1-202ENST00000466471 CYB5BO43169 146 aa2.85□□□□□ -1.95
SORT1-202ENST00000466471 MLNRO43193 412 aa2.85□□□□□ -1.95
SORT1-202ENST00000466471 KBTBD11O94819 623 aa2.85□□□□□ -1.95
SORT1-202ENST00000466471 APOHP02749 345 aaPredicted RBP2.85□□□□□ -1.95
SORT1-202ENST00000466471 IGKV3-11P04433 115 aa2.85□□□□□ -1.95
SORT1-202ENST00000466471 CST2P09228 141 aa2.85□□□□□ -1.95
SORT1-202ENST00000466471 NPIPA8P0DM63 369 aa2.85□□□□□ -1.95
SORT1-202ENST00000466471 OR13C7P0DN81 318 aa2.85□□□□□ -1.95
SORT1-202ENST00000466471 BCL2P10415 239 aa2.85□□□□□ -1.95
SORT1-202ENST00000466471 CCL4P13236 92 aa2.85□□□□□ -1.95
SORT1-202ENST00000466471 FKBP2P26885 142 aaKnown RBP2.85□□□□□ -1.95
SORT1-202ENST00000466471 DRD3P35462 400 aa2.85□□□□□ -1.95
SORT1-202ENST00000466471 CTRLP40313 264 aa2.85□□□□□ -1.95
SORT1-202ENST00000466471 FHITP49789 147 aa2.85□□□□□ -1.95
SORT1-202ENST00000466471 HIST1H3AP68431 136 aa2.85□□□□□ -1.95
SORT1-202ENST00000466471 CX3CL1P78423 397 aa2.85□□□□□ -1.95
SORT1-202ENST00000466471 COL10A1Q03692 680 aa2.85□□□□□ -1.95
SORT1-202ENST00000466471 Q0VG73 95 aa2.85□□□□□ -1.95
SORT1-202ENST00000466471 GNMTQ14749 295 aa2.85□□□□□ -1.95
SORT1-202ENST00000466471 KIR2DS5Q14953 304 aa2.85□□□□□ -1.95
SORT1-202ENST00000466471 SLC9A3R2Q15599 337 aa2.85□□□□□ -1.95
SORT1-202ENST00000466471 CD226Q15762 336 aa2.85□□□□□ -1.95
SORT1-202ENST00000466471 HIST3H3Q16695 136 aa2.85□□□□□ -1.95
SORT1-202ENST00000466471 MAJINQ3KP22 176 aa2.85□□□□□ -1.95
SORT1-202ENST00000466471 KRTAP15-1Q3LI76 137 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms