RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 AADACP22760 399 aa16.77■□□□□ 0.28
LIME1-203ENST00000465591 CTF1Q16619 201 aa16.77■□□□□ 0.28
LIME1-203ENST00000465591 OVCH2Q7RTZ1 564 aa16.77■□□□□ 0.28
LIME1-203ENST00000465591 NAA50Q9GZZ1 169 aaKnown RBP16.77■□□□□ 0.28
LIME1-203ENST00000465591 DIABLOQ9NR28 239 aa16.77■□□□□ 0.28
LIME1-203ENST00000465591 MSGN1A6NI15 193 aa16.76■□□□□ 0.27
LIME1-203ENST00000465591 HSPB1P04792 205 aaKnown RBP16.76■□□□□ 0.27
LIME1-203ENST00000465591 CD40LGP29965 261 aa16.76■□□□□ 0.27
LIME1-203ENST00000465591 FCGR2CP31995 323 aa16.76■□□□□ 0.27
LIME1-203ENST00000465591 ARPC4P59998 168 aa16.76■□□□□ 0.27
LIME1-203ENST00000465591 TNXAQ16473 311 aa16.76■□□□□ 0.27
LIME1-203ENST00000465591 VKORC1L1Q8N0U8 176 aa16.76■□□□□ 0.27
LIME1-203ENST00000465591 RAB2BQ8WUD1 216 aa16.76■□□□□ 0.27
LIME1-203ENST00000465591 BCL7BQ9BQE9 202 aa16.76■□□□□ 0.27
LIME1-203ENST00000465591 ZNF430Q9H8G1 570 aaPredicted RBP16.76■□□□□ 0.27
LIME1-203ENST00000465591 CCL28Q9NRJ3 127 aa16.76■□□□□ 0.27
LIME1-203ENST00000465591 TAS2R8Q9NYW2 309 aa16.76■□□□□ 0.27
LIME1-203ENST00000465591 ZMAT5Q9UDW3 170 aaKnown RBP16.76■□□□□ 0.27
LIME1-203ENST00000465591 LSM4Q9Y4Z0 139 aaKnown RBP16.76■□□□□ 0.27
LIME1-203ENST00000465591 H3BUA1 57 aa16.75■□□□□ 0.27
LIME1-203ENST00000465591 XRCC3O43542 346 aa16.75■□□□□ 0.27
LIME1-203ENST00000465591 SLC22A5O76082 557 aa16.75■□□□□ 0.27
LIME1-203ENST00000465591 TMBIM6P55061 237 aa16.75■□□□□ 0.27
LIME1-203ENST00000465591 C10orf55Q5SWW7 151 aa16.75■□□□□ 0.27
LIME1-203ENST00000465591 TCTEX1D2Q8WW35 142 aa16.75■□□□□ 0.27
LIME1-203ENST00000465591 SRSF12Q8WXF0 261 aaKnown RBP16.75■□□□□ 0.27
LIME1-203ENST00000465591 SLC25A46Q96AG3 418 aa16.75■□□□□ 0.27
LIME1-203ENST00000465591 B9D2Q9BPU9 175 aa16.75■□□□□ 0.27
LIME1-203ENST00000465591 DCUN1D5Q9BTE7 237 aa16.75■□□□□ 0.27
LIME1-203ENST00000465591 PRELID3BQ9Y3B1 194 aa16.75■□□□□ 0.27
LIME1-203ENST00000465591 CDK10Q15131 360 aa16.74■□□□□ 0.27
LIME1-203ENST00000465591 UBE2NLQ5JXB2 153 aa16.74■□□□□ 0.27
LIME1-203ENST00000465591 MFSD4AQ8N468 514 aa16.74■□□□□ 0.27
LIME1-203ENST00000465591 SAMD12Q8N8I0 201 aa16.74■□□□□ 0.27
LIME1-203ENST00000465591 ADAD2Q8NCV1 583 aaKnown RBP16.74■□□□□ 0.27
LIME1-203ENST00000465591 SECTM1Q8WVN6 248 aa16.74■□□□□ 0.27
LIME1-203ENST00000465591 ACOT12Q8WYK0 555 aa16.74■□□□□ 0.27
LIME1-203ENST00000465591 TMEM68Q96MH6 324 aa16.74■□□□□ 0.27
LIME1-203ENST00000465591 HSD17B10Q99714 261 aaKnown RBP16.74■□□□□ 0.27
LIME1-203ENST00000465591 TINAGL1Q9GZM7 467 aaPredicted RBP16.74■□□□□ 0.27
LIME1-203ENST00000465591 ZNF256Q9Y2P7 627 aaPredicted RBP16.74■□□□□ 0.27
LIME1-203ENST00000465591 TNFSF12O43508 249 aa16.73■□□□□ 0.27
LIME1-203ENST00000465591 SAP30O75446 220 aa16.73■□□□□ 0.27
LIME1-203ENST00000465591 PPYP01298 95 aa16.73■□□□□ 0.27
LIME1-203ENST00000465591 INSL3P51460 131 aa16.73■□□□□ 0.27
LIME1-203ENST00000465591 DYRK1AQ13627 763 aa16.73■□□□□ 0.27
LIME1-203ENST00000465591 ACSM6Q6P461 480 aa16.73■□□□□ 0.27
LIME1-203ENST00000465591 KCTD12Q96CX2 325 aaKnown RBP16.73■□□□□ 0.27
LIME1-203ENST00000465591 S100A16Q96FQ6 103 aaKnown RBP16.73■□□□□ 0.27
LIME1-203ENST00000465591 PHB2Q99623 299 aa16.73■□□□□ 0.27
LIME1-203ENST00000465591 COA4Q9NYJ1 87 aa16.73■□□□□ 0.27
LIME1-203ENST00000465591 MRPS7Q9Y2R9 242 aaKnown RBP16.73■□□□□ 0.27
LIME1-203ENST00000465591 C13orf42A0A1B0GVH6 325 aa16.72■□□□□ 0.27
LIME1-203ENST00000465591 ANKRD34BA5PLL1 514 aa16.72■□□□□ 0.27
LIME1-203ENST00000465591 BRI3O95415 125 aa16.72■□□□□ 0.27
LIME1-203ENST00000465591 RORCP51449 518 aa16.72■□□□□ 0.27
LIME1-203ENST00000465591 TAS2R20P59543 309 aa16.72■□□□□ 0.27
LIME1-203ENST00000465591 CD69Q07108 199 aa16.72■□□□□ 0.27
LIME1-203ENST00000465591 ZNF429Q86V71 674 aa16.72■□□□□ 0.27
LIME1-203ENST00000465591 TRBV12-3P01733 135 aa16.71■□□□□ 0.27
LIME1-203ENST00000465591 PRH1P02810 166 aa16.71■□□□□ 0.27
LIME1-203ENST00000465591 EIF4EP06730 217 aaKnown RBP16.71■□□□□ 0.27
LIME1-203ENST00000465591 CBX5P45973 191 aa16.71■□□□□ 0.27
LIME1-203ENST00000465591 FXYD4P59646 89 aa16.71■□□□□ 0.27
LIME1-203ENST00000465591 ZNF66Q6ZN08 573 aa16.71■□□□□ 0.27
LIME1-203ENST00000465591 PUSL1Q8N0Z8 303 aaKnown RBP16.71■□□□□ 0.27
LIME1-203ENST00000465591 OR5AP2Q8NGF4 316 aa16.71■□□□□ 0.27
LIME1-203ENST00000465591 OR4S2Q8NH73 311 aa16.71■□□□□ 0.27
LIME1-203ENST00000465591 ANAPC10Q9UM13 185 aa16.71■□□□□ 0.27
LIME1-203ENST00000465591 A0A0G2JLM5 398 aa16.7■□□□□ 0.26
LIME1-203ENST00000465591 E7EUB6 86 aa16.7■□□□□ 0.26
LIME1-203ENST00000465591 OR9G9P0C7N8 305 aa16.7■□□□□ 0.26
LIME1-203ENST00000465591 ZNF45Q02386 682 aa16.7■□□□□ 0.26
LIME1-203ENST00000465591 TMEM69Q5SWH9 247 aa16.7■□□□□ 0.26
LIME1-203ENST00000465591 HAPLN4Q86UW8 402 aa16.7■□□□□ 0.26
LIME1-203ENST00000465591 MMD2Q8IY49 270 aa16.7■□□□□ 0.26
LIME1-203ENST00000465591 AP3S1Q92572 193 aa16.7■□□□□ 0.26
LIME1-203ENST00000465591 SLC5A7Q9GZV3 580 aa16.7■□□□□ 0.26
LIME1-203ENST00000465591 RANGRFQ9HD47 186 aaPredicted RBP16.7■□□□□ 0.26
LIME1-203ENST00000465591 ADAM30Q9UKF2 790 aa16.7■□□□□ 0.26
LIME1-203ENST00000465591 A0A1B0GW64 132 aa16.69■□□□□ 0.26
LIME1-203ENST00000465591 CCDC160A6NGH7 325 aa16.69■□□□□ 0.26
LIME1-203ENST00000465591 LY86O95711 162 aa16.69■□□□□ 0.26
LIME1-203ENST00000465591 SPNP16150 400 aa16.69■□□□□ 0.26
LIME1-203ENST00000465591 MSMO1Q15800 293 aa16.69■□□□□ 0.26
LIME1-203ENST00000465591 ZNF343Q6P1L6 599 aa16.69■□□□□ 0.26
LIME1-203ENST00000465591 C19orf35Q6ZS72 473 aa16.69■□□□□ 0.26
LIME1-203ENST00000465591 TMEM167AQ8TBQ9 72 aa16.69■□□□□ 0.26
LIME1-203ENST00000465591 GIMAP1Q8WWP7 306 aa16.69■□□□□ 0.26
LIME1-203ENST00000465591 IFT46Q9NQC8 304 aa16.69■□□□□ 0.26
LIME1-203ENST00000465591 HMX3A6NHT5 357 aa16.68■□□□□ 0.26
LIME1-203ENST00000465591 TEX22C9J3V5 150 aa16.68■□□□□ 0.26
LIME1-203ENST00000465591 MPPED1O15442 326 aa16.68■□□□□ 0.26
LIME1-203ENST00000465591 KBTBD11O94819 623 aa16.68■□□□□ 0.26
LIME1-203ENST00000465591 OR2A4O95047 310 aa16.68■□□□□ 0.26
LIME1-203ENST00000465591 IL6RP08887 468 aaPredicted RBP16.68■□□□□ 0.26
LIME1-203ENST00000465591 MYOD1P15172 320 aa16.68■□□□□ 0.26
LIME1-203ENST00000465591 RFX2P48378 723 aa16.68■□□□□ 0.26
LIME1-203ENST00000465591 DCTN2Q13561 401 aaKnown RBP16.68■□□□□ 0.26
LIME1-203ENST00000465591 VAX1Q5SQQ9 334 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms