RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 DHCR7Q9UBM7 475 aaKnown RBP2.37□□□□□ -2.03
VPS8-215ENST00000460158 SLC23A2Q9UGH3 650 aa2.37□□□□□ -2.03
VPS8-215ENST00000460158 LAMTOR3Q9UHA4 124 aa2.37□□□□□ -2.03
VPS8-215ENST00000460158 ZNF230Q9UIE0 474 aaPredicted RBP2.37□□□□□ -2.03
VPS8-215ENST00000460158 LAMTOR2Q9Y2Q5 125 aa2.37□□□□□ -2.03
VPS8-215ENST00000460158 FLVCR1Q9Y5Y0 555 aa2.37□□□□□ -2.03
VPS8-215ENST00000460158 THSD7BQ9C0I4 1608 aa2.37□□□□□ -2.03
VPS8-215ENST00000460158 SCN2AQ99250 2005 aa2.37□□□□□ -2.03
VPS8-215ENST00000460158 MYH6P13533 1939 aa2.36□□□□□ -2.03
VPS8-215ENST00000460158 MED23Q9ULK4 1368 aa2.36□□□□□ -2.03
VPS8-215ENST00000460158 REREQ9P2R6 1566 aa2.36□□□□□ -2.03
VPS8-215ENST00000460158 DOCK4Q8N1I0 1966 aa2.36□□□□□ -2.03
VPS8-215ENST00000460158 PLCH2O75038 1416 aa2.36□□□□□ -2.03
VPS8-215ENST00000460158 ERBINQ96RT1 1412 aa2.36□□□□□ -2.03
VPS8-215ENST00000460158 HECW1Q76N89 1606 aa2.36□□□□□ -2.03
VPS8-215ENST00000460158 IGKV6D-41A0A0C4DH26 115 aa2.36□□□□□ -2.03
VPS8-215ENST00000460158 EPOPA6NHQ4 379 aa2.36□□□□□ -2.03
VPS8-215ENST00000460158 ZFP92A6NM28 416 aa2.36□□□□□ -2.03
VPS8-215ENST00000460158 ZNF705GA8MUZ8 300 aaPredicted RBP2.36□□□□□ -2.03
VPS8-215ENST00000460158 B4DEV8 164 aa2.36□□□□□ -2.03
VPS8-215ENST00000460158 H3BSA7 217 aa2.36□□□□□ -2.03
VPS8-215ENST00000460158 UPK1AO00322 258 aa2.36□□□□□ -2.03
VPS8-215ENST00000460158 MRASO14807 208 aa2.36□□□□□ -2.03
VPS8-215ENST00000460158 GSTZ1O43708 216 aaPredicted RBP2.36□□□□□ -2.03
VPS8-215ENST00000460158 SLC37A4O43826 429 aa2.36□□□□□ -2.03
VPS8-215ENST00000460158 GNG7O60262 68 aa2.36□□□□□ -2.03
VPS8-215ENST00000460158 OR2H2O95918 312 aa2.36□□□□□ -2.03
VPS8-215ENST00000460158 ADRA2AP08913 450 aa2.36□□□□□ -2.03
VPS8-215ENST00000460158 SMIM17P0DL12 118 aa2.36□□□□□ -2.03
VPS8-215ENST00000460158 CTSEP14091 401 aa2.36□□□□□ -2.03
VPS8-215ENST00000460158 RPS4Y1P22090 263 aaKnown RBP2.36□□□□□ -2.03
VPS8-215ENST00000460158 EVI2AP22794 236 aa2.36□□□□□ -2.03
VPS8-215ENST00000460158 RPS3P23396 243 aaKnown RBP eCLIP2.36□□□□□ -2.03
VPS8-215ENST00000460158 OR10J1P30954 320 aa2.36□□□□□ -2.03
VPS8-215ENST00000460158 POLR2IP36954 125 aaKnown RBP2.36□□□□□ -2.03
VPS8-215ENST00000460158 PSMB3P49720 205 aa2.36□□□□□ -2.03
VPS8-215ENST00000460158 POLR2HP52434 150 aaKnown RBP2.36□□□□□ -2.03
VPS8-215ENST00000460158 GABARAPL2P60520 117 aa2.36□□□□□ -2.03
VPS8-215ENST00000460158 LYZP61626 148 aa2.36□□□□□ -2.03
VPS8-215ENST00000460158 RPL23P62829 140 aaKnown RBP2.36□□□□□ -2.03
VPS8-215ENST00000460158 HERVK_113P63121 156 aa2.36□□□□□ -2.03
VPS8-215ENST00000460158 ERCC8Q13216 396 aa2.36□□□□□ -2.03
VPS8-215ENST00000460158 ZNF79Q15937 498 aa2.36□□□□□ -2.03
VPS8-215ENST00000460158 PRR4Q16378 134 aa2.36□□□□□ -2.03
VPS8-215ENST00000460158 MORN2Q502X0 79 aa2.36□□□□□ -2.03
VPS8-215ENST00000460158 CLLU1OSQ5K130 101 aa2.36□□□□□ -2.03
VPS8-215ENST00000460158 TMEM69Q5SWH9 247 aa2.36□□□□□ -2.03
VPS8-215ENST00000460158 LYRM7Q5U5X0 104 aa2.36□□□□□ -2.03
VPS8-215ENST00000460158 DNAJC24Q6P3W2 148 aa2.36□□□□□ -2.03
VPS8-215ENST00000460158 HAGHLQ6PII5 290 aaPredicted RBP2.36□□□□□ -2.03
VPS8-215ENST00000460158 FAM19A3Q7Z5A8 133 aa2.36□□□□□ -2.03
VPS8-215ENST00000460158 SGPP2Q8IWX5 399 aa2.36□□□□□ -2.03
VPS8-215ENST00000460158 BAP18Q8IXM2 172 aa2.36□□□□□ -2.03
VPS8-215ENST00000460158 CEND1Q8N111 149 aa2.36□□□□□ -2.03
VPS8-215ENST00000460158 LINC00337Q8N6G1 96 aa2.36□□□□□ -2.03
VPS8-215ENST00000460158 KRTCAP2Q8N6L1 136 aa2.36□□□□□ -2.03
VPS8-215ENST00000460158 ZIC4Q8N9L1 334 aa2.36□□□□□ -2.03
VPS8-215ENST00000460158 TMEM229BQ8NBD8 167 aa2.36□□□□□ -2.03
VPS8-215ENST00000460158 OR52P1PQ8NH57 321 aa2.36□□□□□ -2.03
VPS8-215ENST00000460158 SLC7A6Q92536 515 aa2.36□□□□□ -2.03
VPS8-215ENST00000460158 FRZBQ92765 325 aa2.36□□□□□ -2.03
VPS8-215ENST00000460158 STARD4Q96DR4 205 aa2.36□□□□□ -2.03
VPS8-215ENST00000460158 HSD17B10Q99714 261 aaKnown RBP2.36□□□□□ -2.03
VPS8-215ENST00000460158 LINC00470Q9BZP3 86 aa2.36□□□□□ -2.03
VPS8-215ENST00000460158 ZNF436Q9C0F3 470 aaPredicted RBP2.36□□□□□ -2.03
VPS8-215ENST00000460158 LPAR5Q9H1C0 372 aa2.36□□□□□ -2.03
VPS8-215ENST00000460158 Q9H3A6 140 aa2.36□□□□□ -2.03
VPS8-215ENST00000460158 ZNF702PQ9H963 129 aa2.36□□□□□ -2.03
VPS8-215ENST00000460158 CXorf21Q9HAI6 301 aa2.36□□□□□ -2.03
VPS8-215ENST00000460158 CCL28Q9NRJ3 127 aa2.36□□□□□ -2.03
VPS8-215ENST00000460158 KCNIP2Q9NS61 270 aa2.36□□□□□ -2.03
VPS8-215ENST00000460158 RPS6KB2Q9UBS0 482 aa2.36□□□□□ -2.03
VPS8-215ENST00000460158 ERG28Q9UKR5 140 aa2.36□□□□□ -2.03
VPS8-215ENST00000460158 TRAPPC2LQ9UL33 140 aa2.36□□□□□ -2.03
VPS8-215ENST00000460158 ANAPC10Q9UM13 185 aa2.36□□□□□ -2.03
VPS8-215ENST00000460158 KLF13Q9Y2Y9 288 aaPredicted RBP2.36□□□□□ -2.03
VPS8-215ENST00000460158 THSD7AQ9UPZ6 1657 aa2.36□□□□□ -2.03
VPS8-215ENST00000460158 FER1L6Q2WGJ9 1857 aa2.36□□□□□ -2.03
VPS8-215ENST00000460158 NFASCO94856 1347 aa2.36□□□□□ -2.03
VPS8-215ENST00000460158 IBTKQ9P2D0 1353 aaPredicted RBP2.36□□□□□ -2.03
VPS8-215ENST00000460158 WNK3Q9BYP7 1800 aa2.35□□□□□ -2.03
VPS8-215ENST00000460158 TNS3Q68CZ2 1445 aa2.35□□□□□ -2.03
VPS8-215ENST00000460158 SSH2Q76I76 1423 aa2.35□□□□□ -2.03
VPS8-215ENST00000460158 ATG2AQ2TAZ0 1938 aa2.35□□□□□ -2.03
VPS8-215ENST00000460158 DICER1Q9UPY3 1922 aaKnown RBP2.35□□□□□ -2.03
VPS8-215ENST00000460158 DENND4BO75064 1496 aaPredicted RBP2.35□□□□□ -2.03
VPS8-215ENST00000460158 TRBV19A0A075B6N1 114 aa2.35□□□□□ -2.03
VPS8-215ENST00000460158 IGKV1-27A0A075B6S5 117 aa2.35□□□□□ -2.03
VPS8-215ENST00000460158 TMED7-TICAM2A0A0A6YYA0 188 aa2.35□□□□□ -2.03
VPS8-215ENST00000460158 IGHV1-69-2A0A0G2JMI3 117 aa2.35□□□□□ -2.03
VPS8-215ENST00000460158 A0A0G2JN53 185 aa2.35□□□□□ -2.03
VPS8-215ENST00000460158 DUXBA0A1W2PPF3 345 aa2.35□□□□□ -2.03
VPS8-215ENST00000460158 C5orf63A6NC05 138 aa2.35□□□□□ -2.03
VPS8-215ENST00000460158 NDUFC2-KCTD14E9PQ53 114 aa2.35□□□□□ -2.03
VPS8-215ENST00000460158 J3QR89 54 aa2.35□□□□□ -2.03
VPS8-215ENST00000460158 LGALS9O00182 355 aa2.35□□□□□ -2.03
VPS8-215ENST00000460158 PEX7O00628 323 aa2.35□□□□□ -2.03
VPS8-215ENST00000460158 SERF1AO75920 110 aa2.35□□□□□ -2.03
VPS8-215ENST00000460158 ZNF682O95780 498 aa2.35□□□□□ -2.03
VPS8-215ENST00000460158 IGHV3-48P01763 117 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms