RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 OR2T7P0C7T2 308 aa3.4□□□□□ -1.87
SBDSP1-204ENST00000453858 IGHV3-43DP0DP04 118 aa3.4□□□□□ -1.87
SBDSP1-204ENST00000453858 ZNF3P17036 446 aa3.4□□□□□ -1.87
SBDSP1-204ENST00000453858 PSMB6P28072 239 aa3.4□□□□□ -1.87
SBDSP1-204ENST00000453858 ALDH3B2P48448 385 aa3.4□□□□□ -1.87
SBDSP1-204ENST00000453858 SNU13P55769 128 aaKnown RBP3.4□□□□□ -1.87
SBDSP1-204ENST00000453858 PLGLAQ15195 96 aa3.4□□□□□ -1.87
SBDSP1-204ENST00000453858 LINC01590Q5TEZ4 76 aa3.4□□□□□ -1.87
SBDSP1-204ENST00000453858 LEMD1Q68G75 181 aa3.4□□□□□ -1.87
SBDSP1-204ENST00000453858 Q8N814 137 aa3.4□□□□□ -1.87
SBDSP1-204ENST00000453858 TCEANCQ8N8B7 351 aa3.4□□□□□ -1.87
SBDSP1-204ENST00000453858 OR2T12Q8NG77 320 aa3.4□□□□□ -1.87
SBDSP1-204ENST00000453858 PLPPR1Q8TBJ4 325 aa3.4□□□□□ -1.87
SBDSP1-204ENST00000453858 OR51E1Q8TCB6 317 aa3.4□□□□□ -1.87
SBDSP1-204ENST00000453858 CCDC107Q8WV48 283 aa3.4□□□□□ -1.87
SBDSP1-204ENST00000453858 RNF5Q99942 180 aa3.4□□□□□ -1.87
SBDSP1-204ENST00000453858 SULT4A1Q9BR01 284 aa3.4□□□□□ -1.87
SBDSP1-204ENST00000453858 ZNF436Q9C0F3 470 aaPredicted RBP3.4□□□□□ -1.87
SBDSP1-204ENST00000453858 FAM206AQ9NX38 181 aa3.4□□□□□ -1.87
SBDSP1-204ENST00000453858 COA4Q9NYJ1 87 aa3.4□□□□□ -1.87
SBDSP1-204ENST00000453858 RABL2AQ9UBK7 228 aaPredicted RBP3.4□□□□□ -1.87
SBDSP1-204ENST00000453858 CACNG5Q9UF02 275 aa3.4□□□□□ -1.87
SBDSP1-204ENST00000453858 LAMP5Q9UJQ1 280 aa3.4□□□□□ -1.87
SBDSP1-204ENST00000453858 EXOSC1Q9Y3B2 195 aaKnown RBP3.4□□□□□ -1.87
SBDSP1-204ENST00000453858 PUS1Q9Y606 427 aaKnown RBP eCLIP3.4□□□□□ -1.87
SBDSP1-204ENST00000453858 V9GYS6 101 aa3.4□□□□□ -1.87
SBDSP1-204ENST00000453858 MUC12Q9UKN1 5478 aa3.4□□□□□ -1.87
SBDSP1-204ENST00000453858 A0A0B4J293 547 aa3.39□□□□□ -1.87
SBDSP1-204ENST00000453858 A0A1B0GTI1 187 aa3.39□□□□□ -1.87
SBDSP1-204ENST00000453858 TEX48A0A1B0GUV7 120 aa3.39□□□□□ -1.87
SBDSP1-204ENST00000453858 FAM230AA0A1W2PPH8 454 aa3.39□□□□□ -1.87
SBDSP1-204ENST00000453858 SMIM9A6NGZ8 99 aa3.39□□□□□ -1.87
SBDSP1-204ENST00000453858 ACOD1A6NK06 481 aa3.39□□□□□ -1.87
SBDSP1-204ENST00000453858 SULT1B1O43704 296 aa3.39□□□□□ -1.87
SBDSP1-204ENST00000453858 DHRS3O75911 302 aa3.39□□□□□ -1.87
SBDSP1-204ENST00000453858 CYB5AP00167 134 aa3.39□□□□□ -1.87
SBDSP1-204ENST00000453858 CRYGCP07315 174 aa3.39□□□□□ -1.87
SBDSP1-204ENST00000453858 OR9G9P0C7N8 305 aa3.39□□□□□ -1.87
SBDSP1-204ENST00000453858 APELAP0DMC3 54 aa3.39□□□□□ -1.87
SBDSP1-204ENST00000453858 CT45A6P0DMU7 189 aa3.39□□□□□ -1.87
SBDSP1-204ENST00000453858 CT45A5P0DMU8 189 aa3.39□□□□□ -1.87
SBDSP1-204ENST00000453858 CT45A7P0DMV0 189 aa3.39□□□□□ -1.87
SBDSP1-204ENST00000453858 PPIBP23284 216 aaKnown RBP3.39□□□□□ -1.87
SBDSP1-204ENST00000453858 MT3P25713 68 aa3.39□□□□□ -1.87
SBDSP1-204ENST00000453858 GNRHRP30968 328 aa3.39□□□□□ -1.87
SBDSP1-204ENST00000453858 MC5RP33032 325 aa3.39□□□□□ -1.87
SBDSP1-204ENST00000453858 OMPP47874 163 aa3.39□□□□□ -1.87
SBDSP1-204ENST00000453858 STX1BP61266 288 aa3.39□□□□□ -1.87
SBDSP1-204ENST00000453858 PNRC1Q12796 327 aaPredicted RBP3.39□□□□□ -1.87
SBDSP1-204ENST00000453858 KLK9Q2XQG4 91 aa3.39□□□□□ -1.87
SBDSP1-204ENST00000453858 PAN3Q58A45 887 aaKnown RBP3.39□□□□□ -1.87
SBDSP1-204ENST00000453858 ZNF554Q86TJ5 538 aa3.39□□□□□ -1.87
SBDSP1-204ENST00000453858 COMMD2Q86X83 199 aa3.39□□□□□ -1.87
SBDSP1-204ENST00000453858 FAM24BQ8N5W8 94 aa3.39□□□□□ -1.87
SBDSP1-204ENST00000453858 ARL11Q969Q4 196 aa3.39□□□□□ -1.87
SBDSP1-204ENST00000453858 RNF2Q99496 336 aa3.39□□□□□ -1.87
SBDSP1-204ENST00000453858 FNDC11Q9BVV2 318 aa3.39□□□□□ -1.87
SBDSP1-204ENST00000453858 NMNAT2Q9BZQ4 307 aa3.39□□□□□ -1.87
SBDSP1-204ENST00000453858 KLK9Q9UKQ9 250 aa3.39□□□□□ -1.87
SBDSP1-204ENST00000453858 UFC1Q9Y3C8 167 aa3.39□□□□□ -1.87
SBDSP1-204ENST00000453858 SMIM23A6NLE4 172 aa3.38□□□□□ -1.87
SBDSP1-204ENST00000453858 IFITM10A6NMD0 228 aa3.38□□□□□ -1.87
SBDSP1-204ENST00000453858 H0YJW9 148 aa3.38□□□□□ -1.87
SBDSP1-204ENST00000453858 DEGS1O15121 323 aa3.38□□□□□ -1.87
SBDSP1-204ENST00000453858 IDH3BO43837 385 aa3.38□□□□□ -1.87
SBDSP1-204ENST00000453858 IGHV3-23P01764 117 aa3.38□□□□□ -1.87
SBDSP1-204ENST00000453858 H2BFMP0C1H6 154 aa3.38□□□□□ -1.87
SBDSP1-204ENST00000453858 ZNF44P15621 663 aa3.38□□□□□ -1.87
SBDSP1-204ENST00000453858 FMO3P31513 532 aa3.38□□□□□ -1.87
SBDSP1-204ENST00000453858 GZMMP51124 257 aa3.38□□□□□ -1.87
SBDSP1-204ENST00000453858 DEFB131AP59861 70 aa3.38□□□□□ -1.87
SBDSP1-204ENST00000453858 HERV-K104P61576 105 aa3.38□□□□□ -1.87
SBDSP1-204ENST00000453858 RIPK1Q13546 671 aa3.38□□□□□ -1.87
SBDSP1-204ENST00000453858 CRMP1Q14194 572 aa3.38□□□□□ -1.87
SBDSP1-204ENST00000453858 CLINT1Q14677 625 aa3.38□□□□□ -1.87
SBDSP1-204ENST00000453858 ZNF773Q6PK81 442 aa3.38□□□□□ -1.87
SBDSP1-204ENST00000453858 ZNF730Q6ZMV8 503 aa3.38□□□□□ -1.87
SBDSP1-204ENST00000453858 STHQ8IWL8 128 aa3.38□□□□□ -1.87
SBDSP1-204ENST00000453858 OFCC1Q8IZS5 231 aa3.38□□□□□ -1.87
SBDSP1-204ENST00000453858 FAM86B1Q8N7N1 296 aa3.38□□□□□ -1.87
SBDSP1-204ENST00000453858 ZNF781Q8N8C0 355 aa3.38□□□□□ -1.87
SBDSP1-204ENST00000453858 PROKR2Q8NFJ6 384 aa3.38□□□□□ -1.87
SBDSP1-204ENST00000453858 OR9I1Q8NGQ6 314 aa3.38□□□□□ -1.87
SBDSP1-204ENST00000453858 OR2T4Q8NH00 348 aa3.38□□□□□ -1.87
SBDSP1-204ENST00000453858 ZNF414Q96IQ9 312 aa3.38□□□□□ -1.87
SBDSP1-204ENST00000453858 PRRC1Q96M27 445 aa3.38□□□□□ -1.87
SBDSP1-204ENST00000453858 C20orf27Q9GZN8 174 aa3.38□□□□□ -1.87
SBDSP1-204ENST00000453858 SLC5A7Q9GZV3 580 aa3.38□□□□□ -1.87
SBDSP1-204ENST00000453858 DNAJC4Q9NNZ3 241 aa3.38□□□□□ -1.87
SBDSP1-204ENST00000453858 SDR39U1Q9NRG7 319 aaPredicted RBP3.38□□□□□ -1.87
SBDSP1-204ENST00000453858 KCNK7Q9Y2U2 307 aa3.38□□□□□ -1.87
SBDSP1-204ENST00000453858 TRAV3A0A0B4J244 114 aa3.37□□□□□ -1.87
SBDSP1-204ENST00000453858 ORC5O43913 435 aa3.37□□□□□ -1.87
SBDSP1-204ENST00000453858 RBBP9O75884 186 aa3.37□□□□□ -1.87
SBDSP1-204ENST00000453858 OR2J3O76001 311 aa3.37□□□□□ -1.87
SBDSP1-204ENST00000453858 DFFBO76075 338 aa3.37□□□□□ -1.87
SBDSP1-204ENST00000453858 IGKV1-16P04430 117 aa3.37□□□□□ -1.87
SBDSP1-204ENST00000453858 POLR2JP52435 117 aaKnown RBP3.37□□□□□ -1.87
SBDSP1-204ENST00000453858 PDZK1IP1Q13113 114 aa3.37□□□□□ -1.87
SBDSP1-204ENST00000453858 TRAM2Q15035 370 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms