RNA–Protein interactions for RNA: ENST00000447507.1

SNHG3-203, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 185 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-203ENST00000447507 MED12LQ86YW9 2145 aa-0.28□□□□□ -2.45
SNHG3-203ENST00000447507 EIF4G1Q04637 1599 aaKnown RBP-0.28□□□□□ -2.45
SNHG3-203ENST00000447507 AQRO60306 1485 aaKnown RBP eCLIP-0.29□□□□□ -2.466e-27■■■■■ 39.3
SNHG3-203ENST00000447507 CCDC88AQ3V6T2 1871 aa-0.29□□□□□ -2.46
SNHG3-203ENST00000447507 KIF27Q86VH2 1401 aa-0.29□□□□□ -2.46
SNHG3-203ENST00000447507 NCOR2Q9Y618 2525 aa-0.29□□□□□ -2.46
SNHG3-203ENST00000447507 TTC21AQ8NDW8 1320 aa-0.29□□□□□ -2.46
SNHG3-203ENST00000447507 HEATR5AQ86XA9 2040 aa-0.29□□□□□ -2.46
SNHG3-203ENST00000447507 TMED7-TICAM2A0A0A6YYA0 188 aa-0.29□□□□□ -2.46
SNHG3-203ENST00000447507 A0A1B0GW15 77 aa-0.29□□□□□ -2.46
SNHG3-203ENST00000447507 C2orf70A6NJV1 201 aa-0.29□□□□□ -2.46
SNHG3-203ENST00000447507 M0R378 163 aa-0.29□□□□□ -2.46
SNHG3-203ENST00000447507 SDCBPO00560 298 aaPredicted RBP-0.29□□□□□ -2.46
SNHG3-203ENST00000447507 CASC3O15234 703 aaKnown RBP-0.29□□□□□ -2.46
SNHG3-203ENST00000447507 FADS1O60427 444 aa-0.29□□□□□ -2.46
SNHG3-203ENST00000447507 ARL6IP5O75915 188 aa-0.29□□□□□ -2.46
SNHG3-203ENST00000447507 PMP2P02689 132 aa-0.29□□□□□ -2.46
SNHG3-203ENST00000447507 CRYGCP07315 174 aa-0.29□□□□□ -2.46
SNHG3-203ENST00000447507 ASAH2BP0C7U1 165 aa-0.29□□□□□ -2.46
SNHG3-203ENST00000447507 HIST1H1CP16403 213 aaKnown RBP-0.29□□□□□ -2.46
SNHG3-203ENST00000447507 FKBP2P26885 142 aaKnown RBP-0.29□□□□□ -2.46
SNHG3-203ENST00000447507 PSMB8P28062 276 aa-0.29□□□□□ -2.46
SNHG3-203ENST00000447507 HLA-DMBP28068 263 aa-0.29□□□□□ -2.46
SNHG3-203ENST00000447507 UGT2B10P36537 528 aa-0.29□□□□□ -2.46
SNHG3-203ENST00000447507 TBPL1P62380 186 aa-0.29□□□□□ -2.46
SNHG3-203ENST00000447507 CNBPP62633 177 aaKnown RBP-0.29□□□□□ -2.46
SNHG3-203ENST00000447507 SUPT4H1P63272 117 aaKnown RBP-0.29□□□□□ -2.46
SNHG3-203ENST00000447507 XIAPP98170 497 aa-0.29□□□□□ -2.46
SNHG3-203ENST00000447507 KISS1Q15726 138 aa-0.29□□□□□ -2.46
SNHG3-203ENST00000447507 BSXQ3C1V8 233 aa-0.29□□□□□ -2.46
SNHG3-203ENST00000447507 GDF5OSQ5U4N7 250 aa-0.29□□□□□ -2.46
SNHG3-203ENST00000447507 LCN8Q6JVE9 175 aa-0.29□□□□□ -2.46
SNHG3-203ENST00000447507 SCGB1D4Q6XE38 83 aa-0.29□□□□□ -2.46
SNHG3-203ENST00000447507 RASSF6Q6ZTQ3 369 aa-0.29□□□□□ -2.46
SNHG3-203ENST00000447507 RPP25LQ8N5L8 163 aaKnown RBP-0.29□□□□□ -2.46
SNHG3-203ENST00000447507 OR2Y1Q8NGV0 311 aa-0.29□□□□□ -2.46
SNHG3-203ENST00000447507 OR5K1Q8NHB7 308 aa-0.29□□□□□ -2.46
SNHG3-203ENST00000447507 LGALS14Q8TCE9 139 aa-0.29□□□□□ -2.46
SNHG3-203ENST00000447507 ZNF418Q8TF45 676 aaPredicted RBP-0.29□□□□□ -2.46
SNHG3-203ENST00000447507 RAB2BQ8WUD1 216 aa-0.29□□□□□ -2.46
SNHG3-203ENST00000447507 PPWD1Q96BP3 646 aaKnown RBP-0.29□□□□□ -2.46
SNHG3-203ENST00000447507 CCDC127Q96BQ5 260 aa-0.29□□□□□ -2.46
SNHG3-203ENST00000447507 LRRC39Q96DD0 335 aa-0.29□□□□□ -2.46
SNHG3-203ENST00000447507 LINC00526Q96FQ7 95 aa-0.29□□□□□ -2.46
SNHG3-203ENST00000447507 TMEM56Q96MV1 263 aa-0.29□□□□□ -2.46
SNHG3-203ENST00000447507 FAM210AQ96ND0 272 aa-0.29□□□□□ -2.46
SNHG3-203ENST00000447507 GAL3ST2Q9H3Q3 398 aa-0.29□□□□□ -2.46
SNHG3-203ENST00000447507 ENPP5Q9UJA9 477 aa-0.29□□□□□ -2.46
SNHG3-203ENST00000447507 KLK9Q9UKQ9 250 aa-0.29□□□□□ -2.46
SNHG3-203ENST00000447507 RABL2BQ9UNT1 228 aa-0.29□□□□□ -2.46
SNHG3-203ENST00000447507 BAIAP2Q9UQB8 552 aa-0.29□□□□□ -2.46
SNHG3-203ENST00000447507 SNX10Q9Y5X0 201 aa-0.29□□□□□ -2.46
SNHG3-203ENST00000447507 DENND4CQ5VZ89 1909 aa-0.29□□□□□ -2.46
SNHG3-203ENST00000447507 IGSF10Q6WRI0 2623 aa-0.29□□□□□ -2.46
SNHG3-203ENST00000447507 RP1P56715 2156 aa-0.29□□□□□ -2.46
SNHG3-203ENST00000447507 NPATQ14207 1427 aa-0.3□□□□□ -2.46
SNHG3-203ENST00000447507 OTOGQ6ZRI0 2925 aa-0.3□□□□□ -2.46
SNHG3-203ENST00000447507 EML6Q6ZMW3 1958 aa-0.3□□□□□ -2.46
SNHG3-203ENST00000447507 CEP192Q8TEP8 1941 aa-0.3□□□□□ -2.46
SNHG3-203ENST00000447507 ANAPC1Q9H1A4 1944 aa-0.3□□□□□ -2.46
SNHG3-203ENST00000447507 ADGRB2O60241 1585 aa-0.3□□□□□ -2.46
SNHG3-203ENST00000447507 TRBV6-8A0A0A6YYG3 113 aa-0.3□□□□□ -2.46
SNHG3-203ENST00000447507 LINC00854A0A1B0GVQ3 168 aa-0.3□□□□□ -2.46
SNHG3-203ENST00000447507 OR6C6A6NF89 314 aa-0.3□□□□□ -2.46
SNHG3-203ENST00000447507 C9JCJ5 164 aa-0.3□□□□□ -2.46
SNHG3-203ENST00000447507 LEPROTO15243 131 aa-0.3□□□□□ -2.46
SNHG3-203ENST00000447507 SLC22A1O15245 554 aa-0.3□□□□□ -2.46
SNHG3-203ENST00000447507 FABP7O15540 132 aa-0.3□□□□□ -2.46
SNHG3-203ENST00000447507 ATP8B1O43520 1251 aa-0.3□□□□□ -2.46
SNHG3-203ENST00000447507 CREBL2O60519 120 aaPredicted RBP-0.3□□□□□ -2.46
SNHG3-203ENST00000447507 SNRNP200O75643 2136 aaKnown RBP-0.3□□□□□ -2.46
SNHG3-203ENST00000447507 KLF7O75840 302 aaPredicted RBP-0.3□□□□□ -2.46
SNHG3-203ENST00000447507 BRI3O95415 125 aa-0.3□□□□□ -2.46
SNHG3-203ENST00000447507 ATP5G1P05496 136 aa-0.3□□□□□ -2.46
SNHG3-203ENST00000447507 SFTPCP11686 197 aa-0.3□□□□□ -2.46
SNHG3-203ENST00000447507 CXCL2P19875 107 aa-0.3□□□□□ -2.46
SNHG3-203ENST00000447507 CXCL3P19876 107 aa-0.3□□□□□ -2.46
SNHG3-203ENST00000447507 BGNP21810 368 aa-0.3□□□□□ -2.46
SNHG3-203ENST00000447507 MSNP26038 577 aaKnown RBP-0.3□□□□□ -2.46
SNHG3-203ENST00000447507 GRPRP30550 384 aa-0.3□□□□□ -2.46
SNHG3-203ENST00000447507 BRS3P32247 399 aa-0.3□□□□□ -2.46
SNHG3-203ENST00000447507 NUP62P37198 522 aaPredicted RBP-0.3□□□□□ -2.46
SNHG3-203ENST00000447507 CD79BP40259 229 aa-0.3□□□□□ -2.46
SNHG3-203ENST00000447507 EMP1P54849 157 aa-0.3□□□□□ -2.46
SNHG3-203ENST00000447507 TMEM33P57088 247 aa-0.3□□□□□ -2.46
SNHG3-203ENST00000447507 FXYD7P58549 80 aa-0.3□□□□□ -2.46
SNHG3-203ENST00000447507 RPL30P62888 115 aaKnown RBP-0.3□□□□□ -2.46
SNHG3-203ENST00000447507 RAB31Q13636 194 aa-0.3□□□□□ -2.46
SNHG3-203ENST00000447507 SPINK9Q5DT21 86 aa-0.3□□□□□ -2.46
SNHG3-203ENST00000447507 C9orf64Q5T6V5 341 aa-0.3□□□□□ -2.46
SNHG3-203ENST00000447507 TTC33Q6PID6 262 aaPredicted RBP-0.3□□□□□ -2.46
SNHG3-203ENST00000447507 ZNF676Q8N7Q3 588 aa-0.3□□□□□ -2.46
SNHG3-203ENST00000447507 ZNF321PQ8N8H1 164 aa-0.3□□□□□ -2.46
SNHG3-203ENST00000447507 OR51H1Q8NH63 302 aa-0.3□□□□□ -2.46
SNHG3-203ENST00000447507 Q8WTZ3 238 aa-0.3□□□□□ -2.46
SNHG3-203ENST00000447507 BORCS5Q969J3 196 aa-0.3□□□□□ -2.46
SNHG3-203ENST00000447507 MED10Q9BTT4 135 aa-0.3□□□□□ -2.46
SNHG3-203ENST00000447507 YIPF3Q9GZM5 350 aa-0.3□□□□□ -2.46
SNHG3-203ENST00000447507 TMEM222Q9H0R3 208 aa-0.3□□□□□ -2.46
SNHG3-203ENST00000447507 RPRD1BQ9NQG5 326 aaKnown RBP-0.3□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms