RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 RASL11BQ9BPW5 248 aa3.44□□□□□ -1.86
SDCBP-205ENST00000447267 ATG101Q9BSB4 218 aa3.44□□□□□ -1.86
SDCBP-205ENST00000447267 BARHL1Q9BZE3 327 aa3.44□□□□□ -1.86
SDCBP-205ENST00000447267 NKX6-2Q9C056 277 aaPredicted RBP3.44□□□□□ -1.86
SDCBP-205ENST00000447267 PPIL3Q9H2H8 161 aaKnown RBP3.44□□□□□ -1.86
SDCBP-205ENST00000447267 VCX2Q9H322 139 aa3.44□□□□□ -1.86
SDCBP-205ENST00000447267 HRH4Q9H3N8 390 aa3.44□□□□□ -1.86
SDCBP-205ENST00000447267 RNF167Q9H6Y7 350 aa3.44□□□□□ -1.86
SDCBP-205ENST00000447267 NMNAT1Q9HAN9 279 aaPredicted RBP3.44□□□□□ -1.86
SDCBP-205ENST00000447267 TMEM138Q9NPI0 162 aa3.44□□□□□ -1.86
SDCBP-205ENST00000447267 MEPEQ9NQ76 525 aaPredicted RBP3.44□□□□□ -1.86
SDCBP-205ENST00000447267 FAM118AQ9NWS6 357 aa3.44□□□□□ -1.86
SDCBP-205ENST00000447267 PAK1IP1Q9NWT1 392 aaPredicted RBP3.44□□□□□ -1.86
SDCBP-205ENST00000447267 CALML5Q9NZT1 146 aa3.44□□□□□ -1.86
SDCBP-205ENST00000447267 GSKIPQ9P0R6 139 aa3.44□□□□□ -1.86
SDCBP-205ENST00000447267 NUFIP1Q9UHK0 495 aaKnown RBP3.44□□□□□ -1.86
SDCBP-205ENST00000447267 CELA1Q9UNI1 258 aa3.44□□□□□ -1.86
SDCBP-205ENST00000447267 FIS1Q9Y3D6 152 aa3.44□□□□□ -1.86
SDCBP-205ENST00000447267 LHFPL6Q9Y693 200 aa3.44□□□□□ -1.86
SDCBP-205ENST00000447267 U3KQV3 271 aa3.44□□□□□ -1.86
SDCBP-205ENST00000447267 TRAV41A0A0B4J266 112 aa3.43□□□□□ -1.86
SDCBP-205ENST00000447267 KIR2DL5BA0A0G2JN68 375 aa3.43□□□□□ -1.86
SDCBP-205ENST00000447267 KIR2DL5BA0A0G2JPC4 375 aa3.43□□□□□ -1.86
SDCBP-205ENST00000447267 OR6C68A6NDL8 312 aa3.43□□□□□ -1.86
SDCBP-205ENST00000447267 SAC3D1A6NKF1 404 aa3.43□□□□□ -1.86
SDCBP-205ENST00000447267 OOSP1A8MZH6 123 aa3.43□□□□□ -1.86
SDCBP-205ENST00000447267 FAM220BPB1ANY3 271 aa3.43□□□□□ -1.86
SDCBP-205ENST00000447267 F5H5K5 113 aa3.43□□□□□ -1.86
SDCBP-205ENST00000447267 SMLR1H3BR10 107 aa3.43□□□□□ -1.86
SDCBP-205ENST00000447267 AZIN1O14977 448 aa3.43□□□□□ -1.86
SDCBP-205ENST00000447267 CA11O75493 328 aa3.43□□□□□ -1.86
SDCBP-205ENST00000447267 WBP4O75554 376 aaKnown RBP3.43□□□□□ -1.86
SDCBP-205ENST00000447267 TK1P04183 234 aa3.43□□□□□ -1.86
SDCBP-205ENST00000447267 HIST1H2ABP04908 130 aa3.43□□□□□ -1.86
SDCBP-205ENST00000447267 UCP1P25874 307 aa3.43□□□□□ -1.86
SDCBP-205ENST00000447267 PRDX2P32119 198 aa3.43□□□□□ -1.86
SDCBP-205ENST00000447267 PRKXP51817 358 aa3.43□□□□□ -1.86
SDCBP-205ENST00000447267 F2RL1P55085 397 aa3.43□□□□□ -1.86
SDCBP-205ENST00000447267 NME5P56597 212 aa3.43□□□□□ -1.86
SDCBP-205ENST00000447267 EDDM3BP56851 147 aa3.43□□□□□ -1.86
SDCBP-205ENST00000447267 DNAJB13P59910 316 aa3.43□□□□□ -1.86
SDCBP-205ENST00000447267 KRTAP10-5P60370 271 aa3.43□□□□□ -1.86
SDCBP-205ENST00000447267 ERVFC1-1P60608 527 aa3.43□□□□□ -1.86
SDCBP-205ENST00000447267 RPL27P61353 136 aaKnown RBP3.43□□□□□ -1.86
SDCBP-205ENST00000447267 MAD2L1Q13257 205 aaPredicted RBP3.43□□□□□ -1.86
SDCBP-205ENST00000447267 EXOSC2Q13868 293 aaKnown RBP3.43□□□□□ -1.86
SDCBP-205ENST00000447267 IL18Q14116 193 aa3.43□□□□□ -1.86
SDCBP-205ENST00000447267 NEDD8Q15843 81 aa3.43□□□□□ -1.86
SDCBP-205ENST00000447267 HLA-DRB5Q30154 266 aa3.43□□□□□ -1.86
SDCBP-205ENST00000447267 C6orf136Q5SQH8 315 aa3.43□□□□□ -1.86
SDCBP-205ENST00000447267 SYT6Q5T7P8 510 aaPredicted RBP3.43□□□□□ -1.86
SDCBP-205ENST00000447267 LEMD1Q68G75 181 aa3.43□□□□□ -1.86
SDCBP-205ENST00000447267 KDM4DQ6B0I6 523 aa3.43□□□□□ -1.86
SDCBP-205ENST00000447267 ZNF773Q6PK81 442 aa3.43□□□□□ -1.86
SDCBP-205ENST00000447267 PLET1Q6UQ28 207 aa3.43□□□□□ -1.86
SDCBP-205ENST00000447267 HIST3H2AQ7L7L0 130 aa3.43□□□□□ -1.86
SDCBP-205ENST00000447267 HSD17B13Q7Z5P4 300 aaPredicted RBP3.43□□□□□ -1.86
SDCBP-205ENST00000447267 C8orf59Q8N0T1 100 aaPredicted RBP3.43□□□□□ -1.86
SDCBP-205ENST00000447267 KIR2DL5AQ8N109 375 aa3.43□□□□□ -1.86
SDCBP-205ENST00000447267 TPRX1Q8N7U7 411 aa3.43□□□□□ -1.86
SDCBP-205ENST00000447267 LRRC75AQ8NAA5 344 aa3.43□□□□□ -1.86
SDCBP-205ENST00000447267 CYB561A3Q8NBI2 242 aa3.43□□□□□ -1.86
SDCBP-205ENST00000447267 OR4K15Q8NH41 348 aa3.43□□□□□ -1.86
SDCBP-205ENST00000447267 ZNRF2Q8NHG8 242 aa3.43□□□□□ -1.86
SDCBP-205ENST00000447267 KIR2DL5BQ8NHK3 375 aa3.43□□□□□ -1.86
SDCBP-205ENST00000447267 DYNLRB2Q8TF09 96 aa3.43□□□□□ -1.86
SDCBP-205ENST00000447267 TWIST2Q8WVJ9 160 aa3.43□□□□□ -1.86
SDCBP-205ENST00000447267 HIST1H2ACQ93077 130 aa3.43□□□□□ -1.86
SDCBP-205ENST00000447267 TMEM203Q969S6 136 aa3.43□□□□□ -1.86
SDCBP-205ENST00000447267 RAB3CQ96E17 227 aa3.43□□□□□ -1.86
SDCBP-205ENST00000447267 Q96MT0 163 aa3.43□□□□□ -1.86
SDCBP-205ENST00000447267 ZNF714Q96N38 554 aa3.43□□□□□ -1.86
SDCBP-205ENST00000447267 OR8B4Q96RC9 309 aa3.43□□□□□ -1.86
SDCBP-205ENST00000447267 PANX1Q96RD7 426 aa3.43□□□□□ -1.86
SDCBP-205ENST00000447267 S1PR3Q99500 378 aa3.43□□□□□ -1.86
SDCBP-205ENST00000447267 EBF4Q9BQW3 602 aa3.43□□□□□ -1.86
SDCBP-205ENST00000447267 C7orf50Q9BRJ6 194 aaKnown RBP3.43□□□□□ -1.86
SDCBP-205ENST00000447267 SLC5A7Q9GZV3 580 aa3.43□□□□□ -1.86
SDCBP-205ENST00000447267 DCSTAMPQ9H295 470 aa3.43□□□□□ -1.86
SDCBP-205ENST00000447267 TMEM27Q9HBJ8 222 aa3.43□□□□□ -1.86
SDCBP-205ENST00000447267 ZNF286AQ9HBT8 521 aa3.43□□□□□ -1.86
SDCBP-205ENST00000447267 BCL2L10Q9HD36 194 aa3.43□□□□□ -1.86
SDCBP-205ENST00000447267 PEF1Q9UBV8 284 aaKnown RBP3.43□□□□□ -1.86
SDCBP-205ENST00000447267 LGALS13Q9UHV8 139 aa3.43□□□□□ -1.86
SDCBP-205ENST00000447267 TRAV34A0A0B4J273 112 aa3.42□□□□□ -1.86
SDCBP-205ENST00000447267 IGHV4-28A0A0C4DH34 117 aa3.42□□□□□ -1.86
SDCBP-205ENST00000447267 C1orf196B1AJZ1 125 aa3.42□□□□□ -1.86
SDCBP-205ENST00000447267 TRDCB7Z8K6 153 aa3.42□□□□□ -1.86
SDCBP-205ENST00000447267 K7N7A8 449 aa3.42□□□□□ -1.86
SDCBP-205ENST00000447267 AIPO00170 330 aa3.42□□□□□ -1.86
SDCBP-205ENST00000447267 PDCD5O14737 125 aa3.42□□□□□ -1.86
SDCBP-205ENST00000447267 ARPC1BO15143 372 aaKnown RBP3.42□□□□□ -1.86
SDCBP-205ENST00000447267 ATP6V0E1O15342 81 aa3.42□□□□□ -1.86
SDCBP-205ENST00000447267 S1PR2O95136 353 aa3.42□□□□□ -1.86
SDCBP-205ENST00000447267 IGKV3-20P01619 116 aa3.42□□□□□ -1.86
SDCBP-205ENST00000447267 TRBV12-3P01733 135 aa3.42□□□□□ -1.86
SDCBP-205ENST00000447267 IGHV3-7P01780 117 aa3.42□□□□□ -1.86
SDCBP-205ENST00000447267 APOC3P02656 99 aa3.42□□□□□ -1.86
SDCBP-205ENST00000447267 SNRPCP09234 159 aaKnown RBP3.42□□□□□ -1.86
SDCBP-205ENST00000447267 DNAH10OSP0CZ25 163 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms