RNA–Protein interactions for RNA: ENST00000427112.6

USP40-203, Transcript of ubiquitin specific peptidase 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP40, Length 3,744 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-203ENST00000427112 OR13A1Q8NGR1 328 aa7.26□□□□□ -1.25
USP40-203ENST00000427112 C5orf30Q96GV9 206 aa7.26□□□□□ -1.25
USP40-203ENST00000427112 VAMP8Q9BV40 100 aa7.26□□□□□ -1.25
USP40-203ENST00000427112 SF3B5Q9BWJ5 86 aaKnown RBP7.26□□□□□ -1.25
USP40-203ENST00000427112 WDR61Q9GZS3 305 aaKnown RBP7.26□□□□□ -1.25
USP40-203ENST00000427112 SERTAD4Q9NUC0 356 aa7.26□□□□□ -1.25
USP40-203ENST00000427112 KCNIP1Q9NZI2 227 aa7.26□□□□□ -1.25
USP40-203ENST00000427112 ARHGAP32A7KAX9 2087 aa7.26□□□□□ -1.25
USP40-203ENST00000427112 A0A1W2PNU3 283 aaPredicted RBP7.26□□□□□ -1.25
USP40-203ENST00000427112 H3BTX0 84 aa7.26□□□□□ -1.25
USP40-203ENST00000427112 M0R1X1 148 aa7.26□□□□□ -1.25
USP40-203ENST00000427112 IGLV2-14P01704 120 aa7.26□□□□□ -1.25
USP40-203ENST00000427112 UCP3P55916 312 aa7.26□□□□□ -1.25
USP40-203ENST00000427112 DLX1P56177 255 aa7.26□□□□□ -1.25
USP40-203ENST00000427112 Q6ZN92 141 aa7.26□□□□□ -1.25
USP40-203ENST00000427112 OR10P1Q8NGE3 313 aa7.26□□□□□ -1.25
USP40-203ENST00000427112 OR2D3Q8NGH3 330 aa7.26□□□□□ -1.25
USP40-203ENST00000427112 VN1R17PQ8TDU5 208 aa7.26□□□□□ -1.25
USP40-203ENST00000427112 RND1Q92730 232 aa7.26□□□□□ -1.25
USP40-203ENST00000427112 TBX15Q96SF7 602 aa7.26□□□□□ -1.25
USP40-203ENST00000427112 C9orf172C9J069 976 aa7.26□□□□□ -1.25
USP40-203ENST00000427112 HAND1O96004 215 aa7.26□□□□□ -1.25
USP40-203ENST00000427112 PLAUP00749 431 aa7.26□□□□□ -1.25
USP40-203ENST00000427112 NPSP0C0P6 89 aa7.26□□□□□ -1.25
USP40-203ENST00000427112 GFRA1P56159 465 aa7.26□□□□□ -1.25
USP40-203ENST00000427112 RIPPLY3P57055 190 aa7.26□□□□□ -1.25
USP40-203ENST00000427112 STARD6P59095 220 aa7.26□□□□□ -1.25
USP40-203ENST00000427112 PSG7Q13046 419 aa7.26□□□□□ -1.25
USP40-203ENST00000427112 PRAMEF5Q5TYX0 476 aa7.26□□□□□ -1.25
USP40-203ENST00000427112 GTF2H5Q6ZYL4 71 aa7.26□□□□□ -1.25
USP40-203ENST00000427112 H1FOOQ8IZA3 346 aaPredicted RBP7.26□□□□□ -1.25
USP40-203ENST00000427112 OR2Z1Q8NG97 314 aa7.26□□□□□ -1.25
USP40-203ENST00000427112 KCNE4Q8WWG9 221 aa7.26□□□□□ -1.25
USP40-203ENST00000427112 ZNF703Q9H7S9 590 aaPredicted RBP7.26□□□□□ -1.25
USP40-203ENST00000427112 VAX2Q9UIW0 290 aa7.26□□□□□ -1.25
USP40-203ENST00000427112 OTOGLQ3ZCN5 2332 aa7.25□□□□□ -1.25
USP40-203ENST00000427112 LOC102723996A0A087X1L8 192 aa7.25□□□□□ -1.25
USP40-203ENST00000427112 LRP5LA4QPB2 252 aa7.25□□□□□ -1.25
USP40-203ENST00000427112 FOXH1O75593 365 aa7.25□□□□□ -1.25
USP40-203ENST00000427112 TNFSF15O95150 251 aa7.25□□□□□ -1.25
USP40-203ENST00000427112 CA1P00915 261 aaPredicted RBP7.25□□□□□ -1.25
USP40-203ENST00000427112 NPPCP23582 126 aa7.25□□□□□ -1.25
USP40-203ENST00000427112 REG1BP48304 166 aa7.25□□□□□ -1.25
USP40-203ENST00000427112 IQCJQ1A5X6 159 aa7.25□□□□□ -1.25
USP40-203ENST00000427112 VWA1Q6PCB0 445 aa7.25□□□□□ -1.25
USP40-203ENST00000427112 RNF138Q8WVD3 245 aa7.25□□□□□ -1.25
USP40-203ENST00000427112 OR6C3Q9NZP0 311 aa7.25□□□□□ -1.25
USP40-203ENST00000427112 B4GALT7Q9UBV7 327 aa7.25□□□□□ -1.25
USP40-203ENST00000427112 CHD8Q9HCK8 2581 aa7.25□□□□□ -1.25
USP40-203ENST00000427112 TOX3O15405 576 aaPredicted RBP7.25□□□□□ -1.25
USP40-203ENST00000427112 SPRY3O43610 288 aa7.25□□□□□ -1.25
USP40-203ENST00000427112 CD46P15529 392 aa7.25□□□□□ -1.25
USP40-203ENST00000427112 TCTAP57738 103 aa7.25□□□□□ -1.25
USP40-203ENST00000427112 FAM216AQ8WUB2 273 aa7.25□□□□□ -1.25
USP40-203ENST00000427112 GALMQ96C23 342 aa7.25□□□□□ -1.25
USP40-203ENST00000427112 RAB40CQ96S21 281 aa7.25□□□□□ -1.25
USP40-203ENST00000427112 WDR54Q9H977 334 aa7.25□□□□□ -1.25
USP40-203ENST00000427112 ZNF391Q9UJN7 358 aa7.25□□□□□ -1.25
USP40-203ENST00000427112 SCO2A0A1W2PP80 73 aa7.25□□□□□ -1.25
USP40-203ENST00000427112 RRHO14718 337 aa7.25□□□□□ -1.25
USP40-203ENST00000427112 NKX2-8O15522 239 aa7.25□□□□□ -1.25
USP40-203ENST00000427112 HIST1H1BP16401 226 aaKnown RBP7.25□□□□□ -1.25
USP40-203ENST00000427112 GCH1P30793 250 aa7.25□□□□□ -1.25
USP40-203ENST00000427112 NUBP1P53384 320 aa7.25□□□□□ -1.25
USP40-203ENST00000427112 SOX8P57073 446 aa7.25□□□□□ -1.25
USP40-203ENST00000427112 DCAF10Q5QP82 559 aa7.25□□□□□ -1.25
USP40-203ENST00000427112 ABLIM2Q6H8Q1 611 aa7.25□□□□□ -1.25
USP40-203ENST00000427112 TGIF2LYQ8IUE0 185 aa7.25□□□□□ -1.25
USP40-203ENST00000427112 SGMS2Q8NHU3 365 aa7.25□□□□□ -1.25
USP40-203ENST00000427112 TECTBQ96PL2 329 aa7.25□□□□□ -1.25
USP40-203ENST00000427112 CIB3Q96Q77 187 aaPredicted RBP7.25□□□□□ -1.25
USP40-203ENST00000427112 C11orf1Q9H5F2 150 aa7.25□□□□□ -1.25
USP40-203ENST00000427112 A0A1W2PRD5 423 aa7.24□□□□□ -1.25
USP40-203ENST00000427112 A0A1W2PRF3 423 aa7.24□□□□□ -1.25
USP40-203ENST00000427112 A0A1W2PRM7 423 aa7.24□□□□□ -1.25
USP40-203ENST00000427112 OR9G9P0C7N8 305 aa7.24□□□□□ -1.25
USP40-203ENST00000427112 GZMBP10144 247 aa7.24□□□□□ -1.25
USP40-203ENST00000427112 PMCHP20382 165 aa7.24□□□□□ -1.25
USP40-203ENST00000427112 PAX5Q02548 391 aa7.24□□□□□ -1.25
USP40-203ENST00000427112 PDLIM3Q53GG5 364 aaPredicted RBP7.24□□□□□ -1.25
USP40-203ENST00000427112 OR1P1Q8NH06 330 aa7.24□□□□□ -1.25
USP40-203ENST00000427112 IGFBPL1Q8WX77 278 aa7.24□□□□□ -1.25
USP40-203ENST00000427112 R3HDM4Q96D70 268 aa7.24□□□□□ -1.25
USP40-203ENST00000427112 YPEL4Q96NS1 127 aa7.24□□□□□ -1.25
USP40-203ENST00000427112 CDX2Q99626 313 aaPredicted RBP7.24□□□□□ -1.25
USP40-203ENST00000427112 ASCL2Q99929 193 aa7.24□□□□□ -1.25
USP40-203ENST00000427112 FKBP11Q9NYL4 201 aa7.24□□□□□ -1.25
USP40-203ENST00000427112 TRAPPC1Q9Y5R8 145 aa7.24□□□□□ -1.25
USP40-203ENST00000427112 SH2D1BO14796 132 aa7.24□□□□□ -1.25
USP40-203ENST00000427112 ZNF83P51522 516 aa7.24□□□□□ -1.25
USP40-203ENST00000427112 FOXF2Q12947 444 aa7.24□□□□□ -1.25
USP40-203ENST00000427112 LRRC75BQ2VPJ9 315 aa7.24□□□□□ -1.25
USP40-203ENST00000427112 SAPCD1Q5SSQ6 148 aa7.24□□□□□ -1.25
USP40-203ENST00000427112 LEMD1Q68G75 181 aa7.24□□□□□ -1.25
USP40-203ENST00000427112 FOXL2NBQ6ZUU3 175 aa7.24□□□□□ -1.25
USP40-203ENST00000427112 Q6ZVH6 145 aa7.24□□□□□ -1.25
USP40-203ENST00000427112 PRDM14Q9GZV8 571 aa7.24□□□□□ -1.25
USP40-203ENST00000427112 IFNA1P01562 189 aa7.24□□□□□ -1.25
USP40-203ENST00000427112 ARL14EPLP0DKL9 152 aa7.24□□□□□ -1.25
USP40-203ENST00000427112 CEACAM1P13688 526 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms