RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 MARVELD3Q96A59 401 aa12.35□□□□□ -0.43
ACTB-204ENST00000425660 SMIM3Q9BZL3 60 aa12.35□□□□□ -0.43
ACTB-204ENST00000425660 RBKSQ9H477 322 aa12.35□□□□□ -0.43
ACTB-204ENST00000425660 APOA2P02652 100 aa12.34□□□□□ -0.43
ACTB-204ENST00000425660 SULT1A1P50225 295 aa12.34□□□□□ -0.43
ACTB-204ENST00000425660 DIAPH2-AS1Q14236 149 aa12.34□□□□□ -0.43
ACTB-204ENST00000425660 OR4A47Q6IF82 309 aa12.34□□□□□ -0.43
ACTB-204ENST00000425660 EIF5AL1Q6IS14 154 aaKnown RBP12.34□□□□□ -0.43
ACTB-204ENST00000425660 SSX9Q7RTT3 188 aa12.34□□□□□ -0.43
ACTB-204ENST00000425660 STX12Q86Y82 276 aa12.34□□□□□ -0.43
ACTB-204ENST00000425660 PDPNQ86YL7 162 aa12.34□□□□□ -0.43
ACTB-204ENST00000425660 KIR3DL3Q8N743 410 aa12.34□□□□□ -0.43
ACTB-204ENST00000425660 OR13D1Q8NGV5 346 aa12.34□□□□□ -0.43
ACTB-204ENST00000425660 AIFM2Q9BRQ8 373 aa12.34□□□□□ -0.43
ACTB-204ENST00000425660 PSENENQ9NZ42 101 aa12.34□□□□□ -0.43
ACTB-204ENST00000425660 ONECUT1Q9UBC0 465 aa12.34□□□□□ -0.43
ACTB-204ENST00000425660 CRYBG3Q68DQ2 2970 aa12.34□□□□□ -0.43
ACTB-204ENST00000425660 A1L4Q6 167 aa12.34□□□□□ -0.43
ACTB-204ENST00000425660 H3BP45 60 aa12.34□□□□□ -0.43
ACTB-204ENST00000425660 BUB1B-PAK6H3BSN5 160 aa12.34□□□□□ -0.43
ACTB-204ENST00000425660 CST7O76096 145 aa12.34□□□□□ -0.43
ACTB-204ENST00000425660 LY86O95711 162 aa12.34□□□□□ -0.43
ACTB-204ENST00000425660 IAPPP10997 89 aa12.34□□□□□ -0.43
ACTB-204ENST00000425660 PDLIM4P50479 330 aa12.34□□□□□ -0.43
ACTB-204ENST00000425660 LMO4P61968 165 aa12.34□□□□□ -0.43
ACTB-204ENST00000425660 PAX2Q02962 417 aa12.34□□□□□ -0.43
ACTB-204ENST00000425660 ZNF266Q14584 549 aa12.34□□□□□ -0.43
ACTB-204ENST00000425660 TMEM177Q53S58 311 aa12.34□□□□□ -0.43
ACTB-204ENST00000425660 FAM74A1Q5RGS3 127 aa12.34□□□□□ -0.43
ACTB-204ENST00000425660 TGIF2LXQ8IUE1 241 aa12.34□□□□□ -0.43
ACTB-204ENST00000425660 OR11H6Q8NGC7 330 aa12.34□□□□□ -0.43
ACTB-204ENST00000425660 OR4P4Q8NGL7 312 aa12.34□□□□□ -0.43
ACTB-204ENST00000425660 OR5C1Q8NGR4 320 aa12.34□□□□□ -0.43
ACTB-204ENST00000425660 PCNPQ8WW12 178 aaKnown RBP12.34□□□□□ -0.43
ACTB-204ENST00000425660 CIB3Q96Q77 187 aaPredicted RBP12.34□□□□□ -0.43
ACTB-204ENST00000425660 QTRT1Q9BXR0 403 aaKnown RBP12.34□□□□□ -0.43
ACTB-204ENST00000425660 UNKLQ9H9P5 680 aaKnown RBP12.34□□□□□ -0.43
ACTB-204ENST00000425660 MED9Q9NWA0 146 aa12.34□□□□□ -0.43
ACTB-204ENST00000425660 AKAP6Q13023 2319 aa12.34□□□□□ -0.43
ACTB-204ENST00000425660 BORCS7-ASMTA0A0B4J1R7 106 aa12.33□□□□□ -0.44
ACTB-204ENST00000425660 C15orf61A6NNL5 157 aa12.33□□□□□ -0.44
ACTB-204ENST00000425660 SRRM4A7MD48 611 aaKnown RBP12.33□□□□□ -0.44
ACTB-204ENST00000425660 RBMXL2O75526 392 aaKnown RBP12.33□□□□□ -0.44
ACTB-204ENST00000425660 PRTN3P24158 256 aa12.33□□□□□ -0.44
ACTB-204ENST00000425660 ZFP36P26651 326 aaKnown RBP12.33□□□□□ -0.44
ACTB-204ENST00000425660 REG1BP48304 166 aa12.33□□□□□ -0.44
ACTB-204ENST00000425660 DLX1P56177 255 aa12.33□□□□□ -0.44
ACTB-204ENST00000425660 SPCS3P61009 180 aa12.33□□□□□ -0.44
ACTB-204ENST00000425660 TMEM14EPQ6UXP3 125 aa12.33□□□□□ -0.44
ACTB-204ENST00000425660 PDZD9Q8IXQ8 264 aa12.33□□□□□ -0.44
ACTB-204ENST00000425660 OR4A16Q8NH70 328 aa12.33□□□□□ -0.44
ACTB-204ENST00000425660 DTD1Q8TEA8 209 aa12.33□□□□□ -0.44
ACTB-204ENST00000425660 TMED6Q8WW62 240 aa12.33□□□□□ -0.44
ACTB-204ENST00000425660 GINS3Q9BRX5 216 aa12.33□□□□□ -0.44
ACTB-204ENST00000425660 TMEM14BQ9NUH8 114 aa12.33□□□□□ -0.44
ACTB-204ENST00000425660 FOXA2Q9Y261 457 aaPredicted RBP12.33□□□□□ -0.44
ACTB-204ENST00000425660 TRAV3A0A0B4J244 114 aa12.32□□□□□ -0.44
ACTB-204ENST00000425660 NDUFS8O00217 210 aa12.32□□□□□ -0.44
ACTB-204ENST00000425660 COX6B1P14854 86 aa12.32□□□□□ -0.44
ACTB-204ENST00000425660 MC5RP33032 325 aa12.32□□□□□ -0.44
ACTB-204ENST00000425660 RAB13P51153 203 aa12.32□□□□□ -0.44
ACTB-204ENST00000425660 OR2B8PP59922 312 aa12.32□□□□□ -0.44
ACTB-204ENST00000425660 ARF6P62330 175 aa12.32□□□□□ -0.44
ACTB-204ENST00000425660 SP5Q6BEB4 398 aaPredicted RBP12.32□□□□□ -0.44
ACTB-204ENST00000425660 OR4C13Q8NGP0 309 aa12.32□□□□□ -0.44
ACTB-204ENST00000425660 LRRC20Q8TCA0 184 aa12.32□□□□□ -0.44
ACTB-204ENST00000425660 ZDHHC16Q969W1 377 aa12.32□□□□□ -0.44
ACTB-204ENST00000425660 BET1LQ9NYM9 111 aa12.32□□□□□ -0.44
ACTB-204ENST00000425660 GCN1Q92616 2671 aaKnown RBP12.32□□□□□ -0.44
ACTB-204ENST00000425660 FASNP49327 2511 aaKnown RBP12.32□□□□□ -0.44
ACTB-204ENST00000425660 LY6LH3BQJ8 138 aa12.32□□□□□ -0.44
ACTB-204ENST00000425660 FGF16O43320 207 aa12.32□□□□□ -0.44
ACTB-204ENST00000425660 ENSAO43768 121 aaKnown RBP12.32□□□□□ -0.44
ACTB-204ENST00000425660 FAM157CP0CG43 387 aa12.32□□□□□ -0.44
ACTB-204ENST00000425660 PAX1P15863 534 aa12.32□□□□□ -0.44
ACTB-204ENST00000425660 DYNLT3P51808 116 aa12.32□□□□□ -0.44
ACTB-204ENST00000425660 TMEM217Q8N7C4 229 aa12.32□□□□□ -0.44
ACTB-204ENST00000425660 CLDND2Q8NHS1 167 aa12.32□□□□□ -0.44
ACTB-204ENST00000425660 RNF141Q8WVD5 230 aa12.32□□□□□ -0.44
ACTB-204ENST00000425660 LHX4Q969G2 390 aa12.32□□□□□ -0.44
ACTB-204ENST00000425660 FLYWCH2Q96CP2 140 aaKnown RBP12.32□□□□□ -0.44
ACTB-204ENST00000425660 BARX1Q9HBU1 254 aaPredicted RBP12.32□□□□□ -0.44
ACTB-204ENST00000425660 WASHC3Q9Y3C0 194 aa12.32□□□□□ -0.44
ACTB-204ENST00000425660 AMMECR1Q9Y4X0 333 aaPredicted RBP12.32□□□□□ -0.44
ACTB-204ENST00000425660 KPTNQ9Y664 436 aa12.32□□□□□ -0.44
ACTB-204ENST00000425660 SEC11BP0C7V7 166 aa12.31□□□□□ -0.44
ACTB-204ENST00000425660 SPP1P10451 314 aa12.31□□□□□ -0.44
ACTB-204ENST00000425660 S100A1P23297 94 aa12.31□□□□□ -0.44
ACTB-204ENST00000425660 CLINT1Q14677 625 aa12.31□□□□□ -0.44
ACTB-204ENST00000425660 SPANXN5Q5MJ07 72 aa12.31□□□□□ -0.44
ACTB-204ENST00000425660 PUSL1Q8N0Z8 303 aaKnown RBP12.31□□□□□ -0.44
ACTB-204ENST00000425660 LEUTXA8MZ59 168 aa12.3□□□□□ -0.44
ACTB-204ENST00000425660 H7C2Y5 167 aa12.3□□□□□ -0.44
ACTB-204ENST00000425660 SHOXO15266 292 aa12.3□□□□□ -0.44
ACTB-204ENST00000425660 DFFBO76075 338 aa12.3□□□□□ -0.44
ACTB-204ENST00000425660 IFNA17P01571 189 aa12.3□□□□□ -0.44
ACTB-204ENST00000425660 ARG1P05089 322 aa12.3□□□□□ -0.44
ACTB-204ENST00000425660 METTL15P1P0C7V9 234 aa12.3□□□□□ -0.44
ACTB-204ENST00000425660 COX7A1P24310 79 aa12.3□□□□□ -0.44
ACTB-204ENST00000425660 TMEM267Q0VDI3 215 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms