RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 SNAPC3Q92966 411 aa12.31□□□□□ -0.44
COL18A1-205ENST00000423214 EDA2RQ9HAV5 297 aa12.31□□□□□ -0.44
COL18A1-205ENST00000423214 DAPK2Q9UIK4 370 aa12.31□□□□□ -0.44
COL18A1-205ENST00000423214 ADAM30Q9UKF2 790 aa12.31□□□□□ -0.44
COL18A1-205ENST00000423214 LOC100506127A0A0U1RQW1 187 aa12.3□□□□□ -0.44
COL18A1-205ENST00000423214 MSGN1A6NI15 193 aa12.3□□□□□ -0.44
COL18A1-205ENST00000423214 ACTL6BO94805 426 aa12.3□□□□□ -0.44
COL18A1-205ENST00000423214 SDC2P34741 201 aa12.3□□□□□ -0.44
COL18A1-205ENST00000423214 UBE2KP61086 200 aa12.3□□□□□ -0.44
COL18A1-205ENST00000423214 EXOSC2Q13868 293 aaKnown RBP12.3□□□□□ -0.44
COL18A1-205ENST00000423214 IDO2Q6ZQW0 420 aa12.3□□□□□ -0.44
COL18A1-205ENST00000423214 TPRA1Q86W33 373 aa12.3□□□□□ -0.44
COL18A1-205ENST00000423214 TEX45Q8NA69 505 aa12.3□□□□□ -0.44
COL18A1-205ENST00000423214 ADAD2Q8NCV1 583 aaKnown RBP12.3□□□□□ -0.44
COL18A1-205ENST00000423214 C5orf30Q96GV9 206 aa12.3□□□□□ -0.44
COL18A1-205ENST00000423214 CENPOQ9BU64 300 aa12.3□□□□□ -0.44
COL18A1-205ENST00000423214 SIGLEC8Q9NYZ4 499 aa12.3□□□□□ -0.44
COL18A1-205ENST00000423214 FAM223BA6NKX1 122 aa12.29□□□□□ -0.44
COL18A1-205ENST00000423214 SRRM4A7MD48 611 aaKnown RBP12.29□□□□□ -0.44
COL18A1-205ENST00000423214 TUSC2O75896 110 aa12.29□□□□□ -0.44
COL18A1-205ENST00000423214 CSN3P07498 182 aa12.29□□□□□ -0.44
COL18A1-205ENST00000423214 CD36P16671 472 aa12.29□□□□□ -0.44
COL18A1-205ENST00000423214 DUTP33316 252 aaKnown RBP12.29□□□□□ -0.44
COL18A1-205ENST00000423214 RHOGP84095 191 aa12.29□□□□□ -0.44
COL18A1-205ENST00000423214 PRSS8Q16651 343 aa12.29□□□□□ -0.44
COL18A1-205ENST00000423214 HAGHQ16775 308 aa12.29□□□□□ -0.44
COL18A1-205ENST00000423214 CDNFQ49AH0 187 aa12.29□□□□□ -0.44
COL18A1-205ENST00000423214 IL34Q6ZMJ4 242 aa12.29□□□□□ -0.44
COL18A1-205ENST00000423214 FAM223AQ8IWN6 122 aa12.29□□□□□ -0.44
COL18A1-205ENST00000423214 OR2K2Q8NGT1 345 aa12.29□□□□□ -0.44
COL18A1-205ENST00000423214 OSR1Q8TAX0 266 aaPredicted RBP12.29□□□□□ -0.44
COL18A1-205ENST00000423214 IGKV1D-8A0A087WSZ0 117 aa12.28□□□□□ -0.44
COL18A1-205ENST00000423214 AIREO43918 545 aa12.28□□□□□ -0.44
COL18A1-205ENST00000423214 KCTD21Q4G0X4 260 aa12.28□□□□□ -0.44
COL18A1-205ENST00000423214 SFXN4Q6P4A7 337 aa12.28□□□□□ -0.44
COL18A1-205ENST00000423214 KCTD9Q7L273 389 aa12.28□□□□□ -0.44
COL18A1-205ENST00000423214 LGALS14Q8TCE9 139 aa12.28□□□□□ -0.44
COL18A1-205ENST00000423214 DYNLRB2Q8TF09 96 aa12.28□□□□□ -0.44
COL18A1-205ENST00000423214 DDB2Q92466 427 aa12.28□□□□□ -0.44
COL18A1-205ENST00000423214 IZUMO1RA6ND01 250 aa12.27□□□□□ -0.45
COL18A1-205ENST00000423214 LINC00473A8K010 186 aa12.27□□□□□ -0.45
COL18A1-205ENST00000423214 SAA1P0DJI8 122 aaPredicted RBP12.27□□□□□ -0.45
COL18A1-205ENST00000423214 CD81P60033 236 aa12.27□□□□□ -0.45
COL18A1-205ENST00000423214 CDK10Q15131 360 aa12.27□□□□□ -0.45
COL18A1-205ENST00000423214 IDNKQ5T6J7 187 aa12.27□□□□□ -0.45
COL18A1-205ENST00000423214 ADAMTSL5Q6ZMM2 481 aa12.27□□□□□ -0.45
COL18A1-205ENST00000423214 H1FOOQ8IZA3 346 aaPredicted RBP12.27□□□□□ -0.45
COL18A1-205ENST00000423214 OR5H6Q8NGV6 325 aa12.27□□□□□ -0.45
COL18A1-205ENST00000423214 SPIN2AQ99865 258 aa12.27□□□□□ -0.45
COL18A1-205ENST00000423214 SPIN2BQ9BPZ2 258 aa12.27□□□□□ -0.45
COL18A1-205ENST00000423214 THAP7Q9BT49 309 aaPredicted RBP12.27□□□□□ -0.45
COL18A1-205ENST00000423214 DCUN1D5Q9BTE7 237 aa12.27□□□□□ -0.45
COL18A1-205ENST00000423214 ST6GALNAC5Q9BVH7 336 aa12.27□□□□□ -0.45
COL18A1-205ENST00000423214 PLEKHA3Q9HB20 300 aa12.27□□□□□ -0.45
COL18A1-205ENST00000423214 AKIP1Q9NQ31 210 aa12.27□□□□□ -0.45
COL18A1-205ENST00000423214 MRPS7Q9Y2R9 242 aaKnown RBP12.27□□□□□ -0.45
COL18A1-205ENST00000423214 CEPT1Q9Y6K0 416 aa12.27□□□□□ -0.45
COL18A1-205ENST00000423214 J3QRK9 145 aa12.26□□□□□ -0.45
COL18A1-205ENST00000423214 BMPR1BO00238 502 aa12.26□□□□□ -0.45
COL18A1-205ENST00000423214 TPPPO94811 219 aa12.26□□□□□ -0.45
COL18A1-205ENST00000423214 PRH1P02810 166 aa12.26□□□□□ -0.45
COL18A1-205ENST00000423214 TGFBR1P36897 503 aa12.26□□□□□ -0.45
COL18A1-205ENST00000423214 ATP5G2Q06055 141 aa12.26□□□□□ -0.45
COL18A1-205ENST00000423214 ARL6IP1Q15041 203 aa12.26□□□□□ -0.45
COL18A1-205ENST00000423214 MRGPRG-AS1Q2M3A8 158 aa12.26□□□□□ -0.45
COL18A1-205ENST00000423214 SLC25A42Q86VD7 318 aa12.26□□□□□ -0.45
COL18A1-205ENST00000423214 MMD2Q8IY49 270 aa12.26□□□□□ -0.45
COL18A1-205ENST00000423214 ZNF645Q8N7E2 425 aa12.26□□□□□ -0.45
COL18A1-205ENST00000423214 ZNF430Q9H8G1 570 aaPredicted RBP12.26□□□□□ -0.45
COL18A1-205ENST00000423214 SLC2A8Q9NY64 477 aa12.26□□□□□ -0.45
COL18A1-205ENST00000423214 PRELID3BQ9Y3B1 194 aa12.26□□□□□ -0.45
COL18A1-205ENST00000423214 DNAH1Q9P2D7 4330 aa12.25□□□□□ -0.45
COL18A1-205ENST00000423214 TMEM235A6NFC5 223 aa12.25□□□□□ -0.45
COL18A1-205ENST00000423214 FCGR3BO75015 233 aa12.25□□□□□ -0.45
COL18A1-205ENST00000423214 RBMXL2O75526 392 aaKnown RBP12.25□□□□□ -0.45
COL18A1-205ENST00000423214 DTYMKP23919 212 aa12.25□□□□□ -0.45
COL18A1-205ENST00000423214 OR2B11Q5JQS5 317 aa12.25□□□□□ -0.45
COL18A1-205ENST00000423214 FAM209BQ5JX69 171 aa12.25□□□□□ -0.45
COL18A1-205ENST00000423214 HACD4Q5VWC8 232 aa12.25□□□□□ -0.45
COL18A1-205ENST00000423214 Q6ZS49 121 aa12.25□□□□□ -0.45
COL18A1-205ENST00000423214 LAX1Q8IWV1 398 aa12.25□□□□□ -0.45
COL18A1-205ENST00000423214 NUDCD2Q8WVJ2 157 aa12.25□□□□□ -0.45
COL18A1-205ENST00000423214 RETNQ9HD89 108 aa12.25□□□□□ -0.45
COL18A1-205ENST00000423214 JTBO76095 146 aa12.24□□□□□ -0.45
COL18A1-205ENST00000423214 ZNF45Q02386 682 aa12.24□□□□□ -0.45
COL18A1-205ENST00000423214 CD300EQ496F6 205 aaPredicted RBP12.24□□□□□ -0.45
COL18A1-205ENST00000423214 C10orf55Q5SWW7 151 aa12.24□□□□□ -0.45
COL18A1-205ENST00000423214 NECAP1Q8NC96 275 aa12.24□□□□□ -0.45
COL18A1-205ENST00000423214 KCTD12Q96CX2 325 aaKnown RBP12.24□□□□□ -0.45
COL18A1-205ENST00000423214 NEURL2Q9BR09 285 aa12.24□□□□□ -0.45
COL18A1-205ENST00000423214 RHBDL2Q9NX52 303 aa12.24□□□□□ -0.45
COL18A1-205ENST00000423214 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.23□□□□□ -0.45
COL18A1-205ENST00000423214 TRBV9A0A0B4J1U6 114 aa12.23□□□□□ -0.45
COL18A1-205ENST00000423214 DPPA5A6NC42 116 aa12.23□□□□□ -0.45
COL18A1-205ENST00000423214 OR2J3O76001 311 aa12.23□□□□□ -0.45
COL18A1-205ENST00000423214 SLC22A5O76082 557 aa12.23□□□□□ -0.45
COL18A1-205ENST00000423214 GNG2P59768 71 aa12.23□□□□□ -0.45
COL18A1-205ENST00000423214 LSM3P62310 102 aaKnown RBP12.23□□□□□ -0.45
COL18A1-205ENST00000423214 C15orf32Q32M92 178 aa12.23□□□□□ -0.45
COL18A1-205ENST00000423214 TSPAN14Q8NG11 270 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms