RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 NUP62P37198 522 aaPredicted RBP3.08□□□□□ -1.92
HMGB3P20-201ENST00000417997 CEACAM6P40199 344 aa3.08□□□□□ -1.92
HMGB3P20-201ENST00000417997 AKR1C2P52895 323 aa3.08□□□□□ -1.92
HMGB3P20-201ENST00000417997 F2RL1P55085 397 aa3.08□□□□□ -1.92
HMGB3P20-201ENST00000417997 S100A10P60903 97 aa3.08□□□□□ -1.92
HMGB3P20-201ENST00000417997 RND3P61587 244 aa3.08□□□□□ -1.92
HMGB3P20-201ENST00000417997 SUPT4H1P63272 117 aaKnown RBP3.08□□□□□ -1.92
HMGB3P20-201ENST00000417997 CYCSP99999 105 aaKnown RBP3.08□□□□□ -1.92
HMGB3P20-201ENST00000417997 DHODHQ02127 395 aa3.08□□□□□ -1.92
HMGB3P20-201ENST00000417997 PAX5Q02548 391 aa3.08□□□□□ -1.92
HMGB3P20-201ENST00000417997 GNMTQ14749 295 aa3.08□□□□□ -1.92
HMGB3P20-201ENST00000417997 IAH1Q2TAA2 248 aaPredicted RBP3.08□□□□□ -1.92
HMGB3P20-201ENST00000417997 ZNF818PQ6ZRF7 136 aa3.08□□□□□ -1.92
HMGB3P20-201ENST00000417997 C5orf24Q7Z6I8 188 aa3.08□□□□□ -1.92
HMGB3P20-201ENST00000417997 TRPT1Q86TN4 253 aaKnown RBP3.08□□□□□ -1.92
HMGB3P20-201ENST00000417997 KRTAP7-1Q8IUC3 87 aa3.08□□□□□ -1.92
HMGB3P20-201ENST00000417997 ZNF695Q8IW36 515 aa3.08□□□□□ -1.92
HMGB3P20-201ENST00000417997 GAPTQ8N292 157 aa3.08□□□□□ -1.92
HMGB3P20-201ENST00000417997 ZNF645Q8N7E2 425 aa3.08□□□□□ -1.92
HMGB3P20-201ENST00000417997 ZNRF1Q8ND25 227 aa3.08□□□□□ -1.92
HMGB3P20-201ENST00000417997 OR8B3Q8NGG8 313 aa3.08□□□□□ -1.92
HMGB3P20-201ENST00000417997 OR51H1Q8NH63 302 aa3.08□□□□□ -1.92
HMGB3P20-201ENST00000417997 DCUN1D4Q92564 292 aa3.08□□□□□ -1.92
HMGB3P20-201ENST00000417997 TAF15Q92804 592 aaKnown RBP eCLIP3.08□□□□□ -1.92
HMGB3P20-201ENST00000417997 RAB39BQ96DA2 213 aa3.08□□□□□ -1.92
HMGB3P20-201ENST00000417997 SDSLQ96GA7 329 aa3.08□□□□□ -1.92
HMGB3P20-201ENST00000417997 AKR1E2Q96JD6 320 aa3.08□□□□□ -1.92
HMGB3P20-201ENST00000417997 OR8B2Q96RD0 313 aa3.08□□□□□ -1.92
HMGB3P20-201ENST00000417997 CCL13Q99616 98 aa3.08□□□□□ -1.92
HMGB3P20-201ENST00000417997 TRAF4Q9BUZ4 470 aaPredicted RBP3.08□□□□□ -1.92
HMGB3P20-201ENST00000417997 OR2D2Q9H210 308 aa3.08□□□□□ -1.92
HMGB3P20-201ENST00000417997 GAL3ST2Q9H3Q3 398 aa3.08□□□□□ -1.92
HMGB3P20-201ENST00000417997 LIME1Q9H400 295 aa3.08□□□□□ -1.92
HMGB3P20-201ENST00000417997 OR2S2Q9NQN1 319 aa3.08□□□□□ -1.92
HMGB3P20-201ENST00000417997 ZC4H2Q9NQZ6 224 aa3.08□□□□□ -1.92
HMGB3P20-201ENST00000417997 CCL28Q9NRJ3 127 aa3.08□□□□□ -1.92
HMGB3P20-201ENST00000417997 DCAF16Q9NXF7 216 aa3.08□□□□□ -1.92
HMGB3P20-201ENST00000417997 CALYQ9NYX4 217 aa3.08□□□□□ -1.92
HMGB3P20-201ENST00000417997 IDI2-AS1Q9NZ38 188 aa3.08□□□□□ -1.92
HMGB3P20-201ENST00000417997 OPN4Q9UHM6 478 aa3.08□□□□□ -1.92
HMGB3P20-201ENST00000417997 HSPB11Q9Y547 144 aa3.08□□□□□ -1.92
HMGB3P20-201ENST00000417997 MAB21L2Q9Y586 359 aa3.08□□□□□ -1.92
HMGB3P20-201ENST00000417997 DSCAML1Q8TD84 2053 aa3.08□□□□□ -1.92
HMGB3P20-201ENST00000417997 A0A1B0GW55 424 aa3.07□□□□□ -1.92
HMGB3P20-201ENST00000417997 KANTRA0A1W2PQU2 76 aa3.07□□□□□ -1.92
HMGB3P20-201ENST00000417997 C19orf84I3L1E1 186 aa3.07□□□□□ -1.92
HMGB3P20-201ENST00000417997 WRBO00258 174 aa3.07□□□□□ -1.92
HMGB3P20-201ENST00000417997 PPIHO43447 177 aaKnown RBP3.07□□□□□ -1.92
HMGB3P20-201ENST00000417997 NDUFA2O43678 99 aa3.07□□□□□ -1.92
HMGB3P20-201ENST00000417997 ADAP1O75689 374 aa3.07□□□□□ -1.92
HMGB3P20-201ENST00000417997 RP2O75695 350 aa3.07□□□□□ -1.92
HMGB3P20-201ENST00000417997 B3GALNT1O75752 331 aa3.07□□□□□ -1.92
HMGB3P20-201ENST00000417997 SNAPC5O75971 98 aa3.07□□□□□ -1.92
HMGB3P20-201ENST00000417997 OR2A4O95047 310 aa3.07□□□□□ -1.92
HMGB3P20-201ENST00000417997 CD8AP01732 235 aa3.07□□□□□ -1.92
HMGB3P20-201ENST00000417997 SERPINE2P07093 398 aa3.07□□□□□ -1.92
HMGB3P20-201ENST00000417997 OR8U9P0C7N5 309 aa3.07□□□□□ -1.92
HMGB3P20-201ENST00000417997 DUX4L2P0CJ85 424 aa3.07□□□□□ -1.92
HMGB3P20-201ENST00000417997 DUX4L3P0CJ86 424 aa3.07□□□□□ -1.92
HMGB3P20-201ENST00000417997 DUX4L4P0CJ87 422 aa3.07□□□□□ -1.92
HMGB3P20-201ENST00000417997 DUX4L5P0CJ88 424 aa3.07□□□□□ -1.92
HMGB3P20-201ENST00000417997 DUX4L6P0CJ89 424 aa3.07□□□□□ -1.92
HMGB3P20-201ENST00000417997 DUX4L7P0CJ90 424 aa3.07□□□□□ -1.92
HMGB3P20-201ENST00000417997 GZMHP20718 246 aa3.07□□□□□ -1.92
HMGB3P20-201ENST00000417997 PPP1CCP36873 323 aaKnown RBP3.07□□□□□ -1.92
HMGB3P20-201ENST00000417997 GPR6P46095 362 aaPredicted RBP3.07□□□□□ -1.92
HMGB3P20-201ENST00000417997 GNG10P50151 68 aa3.07□□□□□ -1.92
HMGB3P20-201ENST00000417997 RAB7AP51149 207 aa3.07□□□□□ -1.92
HMGB3P20-201ENST00000417997 H2BFSP57053 126 aa3.07□□□□□ -1.92
HMGB3P20-201ENST00000417997 HTD2P86397 168 aa3.07□□□□□ -1.92
HMGB3P20-201ENST00000417997 MEF2CQ06413 473 aaPredicted RBP3.07□□□□□ -1.92
HMGB3P20-201ENST00000417997 TMEM187Q14656 261 aa3.07□□□□□ -1.92
HMGB3P20-201ENST00000417997 ANKRD55Q3KP44 614 aa3.07□□□□□ -1.92
HMGB3P20-201ENST00000417997 SP6Q3SY56 376 aa3.07□□□□□ -1.92
HMGB3P20-201ENST00000417997 Q3ZCU0 254 aa3.07□□□□□ -1.92
HMGB3P20-201ENST00000417997 LY6G6FQ5SQ64 297 aa3.07□□□□□ -1.92
HMGB3P20-201ENST00000417997 AVPI1Q5T686 147 aa3.07□□□□□ -1.92
HMGB3P20-201ENST00000417997 DUX4L9Q6RFH8 374 aaPredicted RBP3.07□□□□□ -1.92
HMGB3P20-201ENST00000417997 TGIF2LYQ8IUE0 185 aa3.07□□□□□ -1.92
HMGB3P20-201ENST00000417997 ZNF843Q8N446 348 aa3.07□□□□□ -1.92
HMGB3P20-201ENST00000417997 C9orf62Q8N4C0 152 aa3.07□□□□□ -1.92
HMGB3P20-201ENST00000417997 GBGT1Q8N5D6 347 aa3.07□□□□□ -1.92
HMGB3P20-201ENST00000417997 DRAM1Q8N682 238 aa3.07□□□□□ -1.92
HMGB3P20-201ENST00000417997 SLC35G3Q8N808 338 aa3.07□□□□□ -1.92
HMGB3P20-201ENST00000417997 INO80EQ8NBZ0 244 aaPredicted RBP3.07□□□□□ -1.92
HMGB3P20-201ENST00000417997 OR8U1Q8NH10 309 aa3.07□□□□□ -1.92
HMGB3P20-201ENST00000417997 RFESDQ8TAC1 157 aa3.07□□□□□ -1.92
HMGB3P20-201ENST00000417997 PPP1R1CQ8WVI7 109 aa3.07□□□□□ -1.92
HMGB3P20-201ENST00000417997 TCTEX1D2Q8WW35 142 aa3.07□□□□□ -1.92
HMGB3P20-201ENST00000417997 RAB1CQ92928 201 aa3.07□□□□□ -1.92
HMGB3P20-201ENST00000417997 RBPMSQ93062 196 aaKnown RBP3.07□□□□□ -1.92
HMGB3P20-201ENST00000417997 GALNT14Q96FL9 552 aa3.07□□□□□ -1.92
HMGB3P20-201ENST00000417997 SEC22AQ96IW7 307 aa3.07□□□□□ -1.92
HMGB3P20-201ENST00000417997 C2orf50Q96LR7 162 aa3.07□□□□□ -1.92
HMGB3P20-201ENST00000417997 ZNF714Q96N38 554 aa3.07□□□□□ -1.92
HMGB3P20-201ENST00000417997 OR2A7Q96R45 310 aa3.07□□□□□ -1.92
HMGB3P20-201ENST00000417997 TP53RKQ96S44 253 aa3.07□□□□□ -1.92
HMGB3P20-201ENST00000417997 TMEM246Q9BRR3 403 aa3.07□□□□□ -1.92
HMGB3P20-201ENST00000417997 DCTN5Q9BTE1 182 aa3.07□□□□□ -1.92
HMGB3P20-201ENST00000417997 NMES1Q9C002 83 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms