RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 TMEM105Q8N8V8 129 aa3.12□□□□□ -1.91
LSM5-205ENST00000409952 ZNF439Q8NDP4 499 aa3.12□□□□□ -1.91
LSM5-205ENST00000409952 OR10J5Q8NHC4 309 aa3.12□□□□□ -1.91
LSM5-205ENST00000409952 GPER1Q99527 375 aa3.12□□□□□ -1.91
LSM5-205ENST00000409952 C1orf50Q9BV19 199 aa3.12□□□□□ -1.91
LSM5-205ENST00000409952 TMEM222Q9H0R3 208 aa3.12□□□□□ -1.91
LSM5-205ENST00000409952 SH3BGRL3Q9H299 93 aa3.12□□□□□ -1.91
LSM5-205ENST00000409952 CELA1Q9UNI1 258 aa3.12□□□□□ -1.91
LSM5-205ENST00000409952 TRAPPC1Q9Y5R8 145 aa3.12□□□□□ -1.91
LSM5-205ENST00000409952 TMEM56-RWDD3S4R434 201 aa3.12□□□□□ -1.91
LSM5-205ENST00000409952 OBSCNQ5VST9 7968 aa3.12□□□□□ -1.91
LSM5-205ENST00000409952 ROBO3Q96MS0 1386 aa3.12□□□□□ -1.91
LSM5-205ENST00000409952 hCG_1818297A0A087WSY0 165 aa3.11□□□□□ -1.91
LSM5-205ENST00000409952 A0A1W2PQ67 120 aa3.11□□□□□ -1.91
LSM5-205ENST00000409952 A6NED7 52 aa3.11□□□□□ -1.91
LSM5-205ENST00000409952 ZNF729A6NN14 1252 aaPredicted RBP3.11□□□□□ -1.91
LSM5-205ENST00000409952 A8MT66 165 aa3.11□□□□□ -1.91
LSM5-205ENST00000409952 G3V2T6 193 aa3.11□□□□□ -1.91
LSM5-205ENST00000409952 ZNF682O95780 498 aa3.11□□□□□ -1.91
LSM5-205ENST00000409952 SPI1P17947 270 aa3.11□□□□□ -1.91
LSM5-205ENST00000409952 PHBP35232 272 aa3.11□□□□□ -1.91
LSM5-205ENST00000409952 OR8G1Q15617 311 aa3.11□□□□□ -1.91
LSM5-205ENST00000409952 LCE3CQ5T5A8 94 aa3.11□□□□□ -1.91
LSM5-205ENST00000409952 SPINK14Q6IE38 97 aa3.11□□□□□ -1.91
LSM5-205ENST00000409952 Q6ZS49 121 aa3.11□□□□□ -1.91
LSM5-205ENST00000409952 H1FOOQ8IZA3 346 aaPredicted RBP3.11□□□□□ -1.91
LSM5-205ENST00000409952 ZFAND2AQ8N6M9 145 aa3.11□□□□□ -1.91
LSM5-205ENST00000409952 OR13C8Q8NGS7 320 aa3.11□□□□□ -1.91
LSM5-205ENST00000409952 GPR146Q96CH1 333 aa3.11□□□□□ -1.91
LSM5-205ENST00000409952 ERMAPQ96PL5 475 aaPredicted RBP3.11□□□□□ -1.91
LSM5-205ENST00000409952 CCDC90BQ9GZT6 254 aa3.11□□□□□ -1.91
LSM5-205ENST00000409952 LYRM2Q9NU23 88 aaPredicted RBP3.11□□□□□ -1.91
LSM5-205ENST00000409952 LINC00588Q9Y4M8 146 aa3.11□□□□□ -1.91
LSM5-205ENST00000409952 NESP48681 1621 aa3.11□□□□□ -1.91
LSM5-205ENST00000409952 RPRD2Q5VT52 1461 aaKnown RBP3.1□□□□□ -1.91
LSM5-205ENST00000409952 A0A1B0GW54 56 aa3.1□□□□□ -1.91
LSM5-205ENST00000409952 C9JCJ5 164 aa3.1□□□□□ -1.91
LSM5-205ENST00000409952 SH2D1AO60880 128 aa3.1□□□□□ -1.91
LSM5-205ENST00000409952 CPMP14384 443 aa3.1□□□□□ -1.91
LSM5-205ENST00000409952 MDKP21741 143 aaPredicted RBP3.1□□□□□ -1.91
LSM5-205ENST00000409952 TBPL1P62380 186 aa3.1□□□□□ -1.91
LSM5-205ENST00000409952 FKBP1AP62942 108 aaKnown RBP3.1□□□□□ -1.91
LSM5-205ENST00000409952 GNG5P63218 68 aa3.1□□□□□ -1.91
LSM5-205ENST00000409952 EIF4EBP2Q13542 120 aaPredicted RBP3.1□□□□□ -1.91
LSM5-205ENST00000409952 C10orf91Q5T1B1 145 aa3.1□□□□□ -1.91
LSM5-205ENST00000409952 ADM2Q7Z4H4 148 aa3.1□□□□□ -1.91
LSM5-205ENST00000409952 SAXO1Q8IYX7 474 aa3.1□□□□□ -1.91
LSM5-205ENST00000409952 C12orf45Q8N5I9 185 aaPredicted RBP3.1□□□□□ -1.91
LSM5-205ENST00000409952 ZNF283Q8N7M2 679 aa3.1□□□□□ -1.91
LSM5-205ENST00000409952 OR13D1Q8NGV5 346 aa3.1□□□□□ -1.91
LSM5-205ENST00000409952 OR4K13Q8NH42 304 aa3.1□□□□□ -1.91
LSM5-205ENST00000409952 GPR119Q8TDV5 335 aa3.1□□□□□ -1.91
LSM5-205ENST00000409952 LMX1AQ8TE12 382 aa3.1□□□□□ -1.91
LSM5-205ENST00000409952 HIST1H2BAQ96A08 127 aa3.1□□□□□ -1.91
LSM5-205ENST00000409952 FOPNLQ96NB1 174 aa3.1□□□□□ -1.91
LSM5-205ENST00000409952 C20orf27Q9GZN8 174 aa3.1□□□□□ -1.91
LSM5-205ENST00000409952 WDR61Q9GZS3 305 aaKnown RBP3.1□□□□□ -1.91
LSM5-205ENST00000409952 C6orf62Q9GZU0 229 aaPredicted RBP3.1□□□□□ -1.91
LSM5-205ENST00000409952 FBXL12Q9NXK8 326 aa3.1□□□□□ -1.91
LSM5-205ENST00000409952 SLC23A2Q9UGH3 650 aa3.1□□□□□ -1.91
LSM5-205ENST00000409952 ICOSQ9Y6W8 199 aa3.1□□□□□ -1.91
LSM5-205ENST00000409952 TDRD6O60522 2096 aaKnown RBP3.1□□□□□ -1.91
LSM5-205ENST00000409952 MYO5BQ9ULV0 1848 aa3.09□□□□□ -1.91
LSM5-205ENST00000409952 TRBV20OR9-2A0A075B6H5 130 aa3.09□□□□□ -1.91
LSM5-205ENST00000409952 TRBV24-1A0A075B6N3 115 aa3.09□□□□□ -1.91
LSM5-205ENST00000409952 A0A0J9YY10 115 aa3.09□□□□□ -1.91
LSM5-205ENST00000409952 A0A1B0GX78 115 aa3.09□□□□□ -1.91
LSM5-205ENST00000409952 H3BMM0 161 aa3.09□□□□□ -1.91
LSM5-205ENST00000409952 H7C1C5 153 aa3.09□□□□□ -1.91
LSM5-205ENST00000409952 ORC5O43913 435 aa3.09□□□□□ -1.91
LSM5-205ENST00000409952 NDUFC2O95298 119 aa3.09□□□□□ -1.91
LSM5-205ENST00000409952 IL4P05112 153 aa3.09□□□□□ -1.91
LSM5-205ENST00000409952 LGALS1P09382 135 aaKnown RBP3.09□□□□□ -1.91
LSM5-205ENST00000409952 RBP1P09455 135 aa3.09□□□□□ -1.91
LSM5-205ENST00000409952 INAFM2P0DMQ5 153 aa3.09□□□□□ -1.91
LSM5-205ENST00000409952 SCGB1A1P11684 91 aa3.09□□□□□ -1.91
LSM5-205ENST00000409952 PPIBP23284 216 aaKnown RBP3.09□□□□□ -1.91
LSM5-205ENST00000409952 S100GP29377 79 aa3.09□□□□□ -1.91
LSM5-205ENST00000409952 ALDH3A1P30838 453 aa3.09□□□□□ -1.91
LSM5-205ENST00000409952 NCALDP61601 193 aa3.09□□□□□ -1.91
LSM5-205ENST00000409952 LCN6P62502 163 aa3.09□□□□□ -1.91
LSM5-205ENST00000409952 FUT5Q11128 374 aa3.09□□□□□ -1.91
LSM5-205ENST00000409952 MRPL51Q4U2R6 128 aaKnown RBP3.09□□□□□ -1.91
LSM5-205ENST00000409952 TMEM78Q5T7P6 136 aa3.09□□□□□ -1.91
LSM5-205ENST00000409952 WDR59Q6PJI9 974 aa3.09□□□□□ -1.91
LSM5-205ENST00000409952 AMTNQ6UX39 209 aa3.09□□□□□ -1.91
LSM5-205ENST00000409952 ZFP2Q6ZN57 461 aa3.09□□□□□ -1.91
LSM5-205ENST00000409952 C3orf22Q8N5N4 141 aa3.09□□□□□ -1.91
LSM5-205ENST00000409952 ST20-AS1Q8NBB2 130 aa3.09□□□□□ -1.91
LSM5-205ENST00000409952 MRPL30Q8TCC3 161 aaKnown RBP3.09□□□□□ -1.91
LSM5-205ENST00000409952 CD200R1Q8TD46 325 aa3.09□□□□□ -1.91
LSM5-205ENST00000409952 ACOT12Q8WYK0 555 aa3.09□□□□□ -1.91
LSM5-205ENST00000409952 UBE2WQ96B02 151 aa3.09□□□□□ -1.91
LSM5-205ENST00000409952 AIF1LQ9BQI0 150 aa3.09□□□□□ -1.91
LSM5-205ENST00000409952 ZNF2Q9BSG1 426 aaPredicted RBP3.09□□□□□ -1.91
LSM5-205ENST00000409952 ACER3Q9NUN7 267 aa3.09□□□□□ -1.91
LSM5-205ENST00000409952 SSR3Q9UNL2 185 aa3.09□□□□□ -1.91
LSM5-205ENST00000409952 GINS2Q9Y248 185 aa3.09□□□□□ -1.91
LSM5-205ENST00000409952 KLK5Q9Y337 293 aaPredicted RBP3.09□□□□□ -1.91
LSM5-205ENST00000409952 YTHDC2Q9H6S0 1430 aaKnown RBP3.09□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 402.5 ms