RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 ERVK-16P61578 105 aa16.41■□□□□ 0.22
C4orf48-202ENST00000409860 DHODHQ02127 395 aa16.41■□□□□ 0.22
C4orf48-202ENST00000409860 C5orf64Q2M2E5 130 aa16.41■□□□□ 0.22
C4orf48-202ENST00000409860 TRIM16LQ309B1 348 aa16.41■□□□□ 0.22
C4orf48-202ENST00000409860 ZNF585BQ52M93 769 aa16.41■□□□□ 0.22
C4orf48-202ENST00000409860 SLC25A42Q86VD7 318 aa16.41■□□□□ 0.22
C4orf48-202ENST00000409860 FAM71E2Q8N5Q1 922 aa16.41■□□□□ 0.22
C4orf48-202ENST00000409860 GALNT14Q96FL9 552 aa16.41■□□□□ 0.22
C4orf48-202ENST00000409860 PRSS22Q9GZN4 317 aa16.41■□□□□ 0.22
C4orf48-202ENST00000409860 FBXL15Q9H469 300 aa16.41■□□□□ 0.22
C4orf48-202ENST00000409860 NUDT15Q9NV35 164 aa16.41■□□□□ 0.22
C4orf48-202ENST00000409860 METTL1Q9UBP6 276 aaKnown RBP16.41■□□□□ 0.22
C4orf48-202ENST00000409860 NUBP2Q9Y5Y2 271 aa16.41■□□□□ 0.22
C4orf48-202ENST00000409860 SRRM4A7MD48 611 aaKnown RBP16.4■□□□□ 0.22
C4orf48-202ENST00000409860 UCP1P25874 307 aa16.4■□□□□ 0.22
C4orf48-202ENST00000409860 RIPPLY3P57055 190 aa16.4■□□□□ 0.22
C4orf48-202ENST00000409860 SP6Q3SY56 376 aa16.4■□□□□ 0.22
C4orf48-202ENST00000409860 NRARPQ7Z6K4 114 aa16.4■□□□□ 0.22
C4orf48-202ENST00000409860 VSTM2AQ8TAG5 236 aa16.4■□□□□ 0.22
C4orf48-202ENST00000409860 TRAV6A0A075B6T7 132 aa16.39■□□□□ 0.21
C4orf48-202ENST00000409860 AMY1AP04745 511 aa16.39■□□□□ 0.21
C4orf48-202ENST00000409860 SAA1P0DJI8 122 aaPredicted RBP16.39■□□□□ 0.21
C4orf48-202ENST00000409860 VAMP1P23763 118 aa16.39■□□□□ 0.21
C4orf48-202ENST00000409860 BLCAPP62952 87 aa16.39■□□□□ 0.21
C4orf48-202ENST00000409860 C9orf152Q5JTZ5 239 aa16.39■□□□□ 0.21
C4orf48-202ENST00000409860 TEX45Q8NA69 505 aa16.39■□□□□ 0.21
C4orf48-202ENST00000409860 DMBX1Q8NFW5 382 aa16.39■□□□□ 0.21
C4orf48-202ENST00000409860 R3HDM4Q96D70 268 aa16.39■□□□□ 0.21
C4orf48-202ENST00000409860 RHOVQ96L33 236 aa16.39■□□□□ 0.21
C4orf48-202ENST00000409860 TMEM222Q9H0R3 208 aa16.39■□□□□ 0.21
C4orf48-202ENST00000409860 CREBL2O60519 120 aaPredicted RBP16.38■□□□□ 0.21
C4orf48-202ENST00000409860 ATG12O94817 140 aa16.38■□□□□ 0.21
C4orf48-202ENST00000409860 NDUFA7O95182 113 aa16.38■□□□□ 0.21
C4orf48-202ENST00000409860 H2AFB2P0C5Z0 115 aa16.38■□□□□ 0.21
C4orf48-202ENST00000409860 ANXA7P20073 488 aaKnown RBP16.38■□□□□ 0.21
C4orf48-202ENST00000409860 SUPT4H1P63272 117 aaKnown RBP16.38■□□□□ 0.21
C4orf48-202ENST00000409860 PPP1R1AQ13522 171 aa16.38■□□□□ 0.21
C4orf48-202ENST00000409860 POU2AF1Q16633 256 aa16.38■□□□□ 0.21
C4orf48-202ENST00000409860 ARSJQ5FYB0 599 aaPredicted RBP16.38■□□□□ 0.21
C4orf48-202ENST00000409860 LIN54Q6MZP7 749 aa16.38■□□□□ 0.21
C4orf48-202ENST00000409860 PLET1Q6UQ28 207 aa16.38■□□□□ 0.21
C4orf48-202ENST00000409860 SSX9Q7RTT3 188 aa16.38■□□□□ 0.21
C4orf48-202ENST00000409860 VKORC1L1Q8N0U8 176 aa16.38■□□□□ 0.21
C4orf48-202ENST00000409860 DUSP18Q8NEJ0 188 aa16.38■□□□□ 0.21
C4orf48-202ENST00000409860 SIGLEC9Q9Y336 463 aa16.38■□□□□ 0.21
C4orf48-202ENST00000409860 ZFHX3Q15911 3703 aa16.37■□□□□ 0.21
C4orf48-202ENST00000409860 SH2D7A6NKC9 451 aaPredicted RBP16.37■□□□□ 0.21
C4orf48-202ENST00000409860 MARCH11A6NNE9 402 aa16.37■□□□□ 0.21
C4orf48-202ENST00000409860 TSPAN9O75954 239 aa16.37■□□□□ 0.21
C4orf48-202ENST00000409860 OR2A4O95047 310 aa16.37■□□□□ 0.21
C4orf48-202ENST00000409860 SFT2D2O95562 160 aa16.37■□□□□ 0.21
C4orf48-202ENST00000409860 PTTG1O95997 202 aa16.37■□□□□ 0.21
C4orf48-202ENST00000409860 HLA-DRB1P01911 266 aa16.37■□□□□ 0.21
C4orf48-202ENST00000409860 CRYGBP07316 175 aa16.37■□□□□ 0.21
C4orf48-202ENST00000409860 RAG2P55895 527 aa16.37■□□□□ 0.21
C4orf48-202ENST00000409860 SRPXP78539 464 aa16.37■□□□□ 0.21
C4orf48-202ENST00000409860 C4orf46Q504U0 113 aa16.37■□□□□ 0.21
C4orf48-202ENST00000409860 Q6ZSV7 163 aa16.37■□□□□ 0.21
C4orf48-202ENST00000409860 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.37■□□□□ 0.21
C4orf48-202ENST00000409860 GLYATL2Q8WU03 294 aa16.37■□□□□ 0.21
C4orf48-202ENST00000409860 OR2A7Q96R45 310 aa16.37■□□□□ 0.21
C4orf48-202ENST00000409860 ZNF702PQ9H963 129 aa16.37■□□□□ 0.21
C4orf48-202ENST00000409860 C2CD3Q4AC94 2353 aa16.37■□□□□ 0.21
C4orf48-202ENST00000409860 NF1P21359 2839 aa16.37■□□□□ 0.21
C4orf48-202ENST00000409860 KRASP01116 189 aa16.36■□□□□ 0.21
C4orf48-202ENST00000409860 OR4E1P0C645 316 aa16.36■□□□□ 0.21
C4orf48-202ENST00000409860 G6PCP35575 357 aa16.36■□□□□ 0.21
C4orf48-202ENST00000409860 RELBQ01201 579 aa16.36■□□□□ 0.21
C4orf48-202ENST00000409860 TMEM187Q14656 261 aa16.36■□□□□ 0.21
C4orf48-202ENST00000409860 PPP1R27Q86WC6 154 aa16.36■□□□□ 0.21
C4orf48-202ENST00000409860 ZNF695Q8IW36 515 aa16.36■□□□□ 0.21
C4orf48-202ENST00000409860 PUSL1Q8N0Z8 303 aaKnown RBP16.36■□□□□ 0.21
C4orf48-202ENST00000409860 OR4F5Q8NH21 305 aa16.36■□□□□ 0.21
C4orf48-202ENST00000409860 OR4A5Q8NH83 315 aa16.36■□□□□ 0.21
C4orf48-202ENST00000409860 OR2T6Q8NHC8 308 aa16.36■□□□□ 0.21
C4orf48-202ENST00000409860 CLCC1Q96S66 551 aa16.36■□□□□ 0.21
C4orf48-202ENST00000409860 ALX4Q9H161 411 aaPredicted RBP16.36■□□□□ 0.21
C4orf48-202ENST00000409860 BEX1Q9HBH7 125 aa16.36■□□□□ 0.21
C4orf48-202ENST00000409860 TPSG1Q9NRR2 321 aa16.36■□□□□ 0.21
C4orf48-202ENST00000409860 TMEM140Q9NV12 185 aa16.36■□□□□ 0.21
C4orf48-202ENST00000409860 BET1LQ9NYM9 111 aa16.36■□□□□ 0.21
C4orf48-202ENST00000409860 PIGBOS1A0A0B4J2F0 54 aa16.35■□□□□ 0.21
C4orf48-202ENST00000409860 KCNAB3O43448 404 aa16.35■□□□□ 0.21
C4orf48-202ENST00000409860 KBTBD11O94819 623 aa16.35■□□□□ 0.21
C4orf48-202ENST00000409860 CDS2O95674 445 aa16.35■□□□□ 0.21
C4orf48-202ENST00000409860 IGKV1-39P01597 117 aa16.35■□□□□ 0.21
C4orf48-202ENST00000409860 HLA-AP01891 365 aaKnown RBP16.35■□□□□ 0.21
C4orf48-202ENST00000409860 IGKV1D-39P04432 117 aa16.35■□□□□ 0.21
C4orf48-202ENST00000409860 HKR1P10072 659 aa16.35■□□□□ 0.21
C4orf48-202ENST00000409860 AKR1C2P52895 323 aa16.35■□□□□ 0.21
C4orf48-202ENST00000409860 OR4A47Q6IF82 309 aa16.35■□□□□ 0.21
C4orf48-202ENST00000409860 LGI3Q8N145 548 aa16.35■□□□□ 0.21
C4orf48-202ENST00000409860 Q8N2B8 174 aa16.35■□□□□ 0.21
C4orf48-202ENST00000409860 RNASE11Q8TAA1 199 aaKnown RBP16.35■□□□□ 0.21
C4orf48-202ENST00000409860 CASTOR1Q8WTX7 329 aa16.35■□□□□ 0.21
C4orf48-202ENST00000409860 RBPMSQ93062 196 aaKnown RBP16.35■□□□□ 0.21
C4orf48-202ENST00000409860 IL22RA2Q969J5 263 aa16.35■□□□□ 0.21
C4orf48-202ENST00000409860 TMEM56Q96MV1 263 aa16.35■□□□□ 0.21
C4orf48-202ENST00000409860 TMEM56-RWDD3S4R434 201 aa16.35■□□□□ 0.21
C4orf48-202ENST00000409860 CUBNO60494 3623 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms