RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 RPS16P62249 146 aaKnown RBP16.97■□□□□ 0.31
USP39-203ENST00000409470 RELBQ01201 579 aa16.97■□□□□ 0.31
USP39-203ENST00000409470 PEA15Q15121 130 aa16.97■□□□□ 0.31
USP39-203ENST00000409470 AARDQ4LEZ3 155 aa16.97■□□□□ 0.31
USP39-203ENST00000409470 C10orf91Q5T1B1 145 aa16.97■□□□□ 0.31
USP39-203ENST00000409470 OR10P1Q8NGE3 313 aa16.97■□□□□ 0.31
USP39-203ENST00000409470 WDR61Q9GZS3 305 aaKnown RBP16.97■□□□□ 0.31
USP39-203ENST00000409470 CARHSP1Q9Y2V2 147 aaKnown RBP16.97■□□□□ 0.31
USP39-203ENST00000409470 TRAV3A0A0B4J244 114 aa16.96■□□□□ 0.31
USP39-203ENST00000409470 GPR37O15354 613 aa16.96■□□□□ 0.31
USP39-203ENST00000409470 PPIHO43447 177 aaKnown RBP16.96■□□□□ 0.31
USP39-203ENST00000409470 GUCA2BQ16661 112 aa16.96■□□□□ 0.31
USP39-203ENST00000409470 RHOVQ96L33 236 aa16.96■□□□□ 0.31
USP39-203ENST00000409470 NKX6-2Q9C056 277 aaPredicted RBP16.96■□□□□ 0.31
USP39-203ENST00000409470 C9JQL5 133 aa16.96■□□□□ 0.3
USP39-203ENST00000409470 OR8U8P0C7N1 319 aa16.96■□□□□ 0.3
USP39-203ENST00000409470 CT45A6P0DMU7 189 aa16.96■□□□□ 0.3
USP39-203ENST00000409470 CT45A5P0DMU8 189 aa16.96■□□□□ 0.3
USP39-203ENST00000409470 CT45A7P0DMV0 189 aa16.96■□□□□ 0.3
USP39-203ENST00000409470 PPOXP50336 477 aa16.96■□□□□ 0.3
USP39-203ENST00000409470 TLE4Q04727 773 aa16.96■□□□□ 0.3
USP39-203ENST00000409470 ATP6V1FQ16864 119 aa16.96■□□□□ 0.3
USP39-203ENST00000409470 DPPA3Q6W0C5 159 aa16.96■□□□□ 0.3
USP39-203ENST00000409470 OR52E5Q8NH55 327 aa16.96■□□□□ 0.3
USP39-203ENST00000409470 PINX1Q96BK5 328 aaKnown RBP16.96■□□□□ 0.3
USP39-203ENST00000409470 PBDC1Q9BVG4 233 aa16.96■□□□□ 0.3
USP39-203ENST00000409470 PARD6GQ9BYG4 376 aaPredicted RBP16.96■□□□□ 0.3
USP39-203ENST00000409470 LY86O95711 162 aa16.95■□□□□ 0.3
USP39-203ENST00000409470 HRASP01112 189 aa16.95■□□□□ 0.3
USP39-203ENST00000409470 RTL8BQ17RB0 113 aa16.95■□□□□ 0.3
USP39-203ENST00000409470 PSMG3Q9BT73 122 aaPredicted RBP16.95■□□□□ 0.3
USP39-203ENST00000409470 TMEM147Q9BVK8 224 aa16.95■□□□□ 0.3
USP39-203ENST00000409470 SLC35D1Q9NTN3 355 aa16.95■□□□□ 0.3
USP39-203ENST00000409470 PMS2P5A8MQ11 134 aa16.94■□□□□ 0.3
USP39-203ENST00000409470 OR4A47Q6IF82 309 aa16.94■□□□□ 0.3
USP39-203ENST00000409470 ZNF833PQ6ZTB9 187 aa16.94■□□□□ 0.3
USP39-203ENST00000409470 TAF15Q92804 592 aaKnown RBP eCLIP16.94■□□□□ 0.3
USP39-203ENST00000409470 HIPK2Q9H2X6 1198 aa16.94■□□□□ 0.3
USP39-203ENST00000409470 PPT1P50897 306 aa16.94■□□□□ 0.3
USP39-203ENST00000409470 PUSL1Q8N0Z8 303 aaKnown RBP16.94■□□□□ 0.3
USP39-203ENST00000409470 OR10X1Q8NGY0 326 aa16.94■□□□□ 0.3
USP39-203ENST00000409470 SFT2D1Q8WV19 159 aa16.94■□□□□ 0.3
USP39-203ENST00000409470 HEYLQ9NQ87 328 aaPredicted RBP16.94■□□□□ 0.3
USP39-203ENST00000409470 RPP30P78346 268 aaKnown RBP16.93■□□□□ 0.3
USP39-203ENST00000409470 TMEM155Q4W5P6 130 aa16.93■□□□□ 0.3
USP39-203ENST00000409470 SPSB3Q6PJ21 355 aa16.93■□□□□ 0.3
USP39-203ENST00000409470 ZNF429Q86V71 674 aa16.93■□□□□ 0.3
USP39-203ENST00000409470 OR13D1Q8NGV5 346 aa16.93■□□□□ 0.3
USP39-203ENST00000409470 RBMXL1Q96E39 390 aaKnown RBP16.93■□□□□ 0.3
USP39-203ENST00000409470 RAB1BQ9H0U4 201 aa16.93■□□□□ 0.3
USP39-203ENST00000409470 BTBD17A6NE02 478 aa16.92■□□□□ 0.3
USP39-203ENST00000409470 C15orf61A6NNL5 157 aa16.92■□□□□ 0.3
USP39-203ENST00000409470 C15orf62A8K5M9 175 aa16.92■□□□□ 0.3
USP39-203ENST00000409470 FAM157AC9JC47 383 aa16.92■□□□□ 0.3
USP39-203ENST00000409470 F12P00748 615 aaPredicted RBP16.92■□□□□ 0.3
USP39-203ENST00000409470 IFNA10P01566 189 aa16.92■□□□□ 0.3
USP39-203ENST00000409470 RAB2AP61019 212 aa16.92■□□□□ 0.3
USP39-203ENST00000409470 GNB2P62879 340 aa16.92■□□□□ 0.3
USP39-203ENST00000409470 CCL20P78556 96 aa16.92■□□□□ 0.3
USP39-203ENST00000409470 SERF2P84101 59 aa16.92■□□□□ 0.3
USP39-203ENST00000409470 DHRS7BQ6IAN0 325 aaPredicted RBP16.92■□□□□ 0.3
USP39-203ENST00000409470 SCRT1Q9BWW7 348 aa16.92■□□□□ 0.3
USP39-203ENST00000409470 ABCA4P78363 2273 aa16.92■□□□□ 0.3
USP39-203ENST00000409470 TRBV23-1A0A0A0MS06 115 aa16.92■□□□□ 0.3
USP39-203ENST00000409470 HOXA1P49639 335 aaPredicted RBP16.92■□□□□ 0.3
USP39-203ENST00000409470 DLX6P56179 175 aa16.92■□□□□ 0.3
USP39-203ENST00000409470 PDLIM3Q53GG5 364 aaPredicted RBP16.92■□□□□ 0.3
USP39-203ENST00000409470 MRPL20Q9BYC9 149 aaKnown RBP16.92■□□□□ 0.3
USP39-203ENST00000409470 CBLN4Q9NTU7 201 aa16.92■□□□□ 0.3
USP39-203ENST00000409470 RALYQ9UKM9 306 aaKnown RBP16.92■□□□□ 0.3
USP39-203ENST00000409470 TCF19Q9Y242 345 aa16.92■□□□□ 0.3
USP39-203ENST00000409470 J3QR06 171 aa16.91■□□□□ 0.3
USP39-203ENST00000409470 NUPL2O15504 423 aaKnown RBP16.91■□□□□ 0.3
USP39-203ENST00000409470 SCAF4O95104 1147 aaKnown RBP16.91■□□□□ 0.3
USP39-203ENST00000409470 SNAPINO95295 136 aa16.91■□□□□ 0.3
USP39-203ENST00000409470 HBE1P02100 147 aa16.91■□□□□ 0.3
USP39-203ENST00000409470 IGKV1-16P04430 117 aa16.91■□□□□ 0.3
USP39-203ENST00000409470 TAGLNQ01995 201 aaKnown RBP16.91■□□□□ 0.3
USP39-203ENST00000409470 HNF4GQ14541 408 aa16.91■□□□□ 0.3
USP39-203ENST00000409470 AVPI1Q5T686 147 aa16.91■□□□□ 0.3
USP39-203ENST00000409470 RPRMQ9NS64 109 aa16.91■□□□□ 0.3
USP39-203ENST00000409470 TPRP12270 2363 aaKnown RBP16.91■□□□□ 0.3
USP39-203ENST00000409470 IGHV2-70P01814 119 aa16.91■□□□□ 0.3
USP39-203ENST00000409470 APOA2P02652 100 aa16.91■□□□□ 0.3
USP39-203ENST00000409470 ARG1P05089 322 aa16.91■□□□□ 0.3
USP39-203ENST00000409470 POU2AF1Q16633 256 aa16.91■□□□□ 0.3
USP39-203ENST00000409470 VSIRQ9H7M9 311 aa16.91■□□□□ 0.3
USP39-203ENST00000409470 FOXA2Q9Y261 457 aaPredicted RBP16.91■□□□□ 0.3
USP39-203ENST00000409470 H7C2Y5 167 aa16.9■□□□□ 0.3
USP39-203ENST00000409470 FGF7P21781 194 aa16.9■□□□□ 0.3
USP39-203ENST00000409470 VDAC2P45880 294 aaPredicted RBP16.9■□□□□ 0.3
USP39-203ENST00000409470 REG1BP48304 166 aa16.9■□□□□ 0.3
USP39-203ENST00000409470 ELLP55199 621 aaPredicted RBP16.9■□□□□ 0.3
USP39-203ENST00000409470 TMEM14BQ9NUH8 114 aa16.9■□□□□ 0.3
USP39-203ENST00000409470 TIMM9Q9Y5J7 89 aa16.9■□□□□ 0.3
USP39-203ENST00000409470 KPTNQ9Y664 436 aa16.9■□□□□ 0.3
USP39-203ENST00000409470 ITPR1Q14643 2758 aa16.9■□□□□ 0.3
USP39-203ENST00000409470 TSPAN4O14817 238 aa16.89■□□□□ 0.29
USP39-203ENST00000409470 FSTL3O95633 263 aa16.89■□□□□ 0.29
USP39-203ENST00000409470 IGHV1-8P0DP01 117 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms